| Annotation Name | DNA-directed RNA polymerase beta chain related cluster |
| Score | 6953&emsp |
| E-value | 0.0 |
| % Sequence Identity | 99% (1363/1374) |
| Locus | RPOB |
| EC Number | 2.7.7.6 |
| COG Function | Transcription |
| KEGG Pathway | Purine metabolism Pyrimidine metabolism RNA polymerase |
| Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
| uniref90 | UniRef90_O52271 | DNA-directed RNA polymerase beta chain related cluster | 6953 | 0.0 | 99% (1363/1374) | RPOB | 2.7.7.6 | 1 | | GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0006350|transcription|IEA; GO:0006351|transcription, DNA-dependent|IEA; GO:0016740|transferase activity|IEA; GO:0046677|response to antibiotic|IEA |
| nr | YP_067096 | DNA-directed RNA polymerase beta subunit; RNA nucleotidyltransferase (DNA-directed).; RNA polymerase I.; RNA polymerase II.; RNA polymerase III. [Rickettsia typhi str. Wilmington] gb|AAU03614.1| DNA-directed RNA polymerase beta subunit; RNA nucleotidyltransferase (DNA-directed).; RNA polymerase I.; RNA polymerase II.; RNA polymerase III. [Rickettsia typhi str. Wilmington] sp|P77941|RPOB_RICTY DNA-directed RNA polymerase beta chain (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) | 6826 | 0.0 | 97% (1333/1374) | | | 3 | | |
| cog | RP140 | [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit | 6953 | 0.0 | 99% (1363/1374) | | | 1 | Transcription | |
| kegg | rty:RT0129 | rpoB; DNA-directed RNA polymerase beta subunit [EC:2.7.7.6] [KO:K03043] | 6826 | 0.0 | 97% (1333/1374) | rpoB | 2.7.7.6 | 2 | Purine metabolism Pyrimidine metabolism RNA polymerase | |
| smart | | No hits found | | | | | | 0 | | |
| pfam | PF00562 | pfam00562, RNA_pol_Rpb2_6, RNA polymerase Rpb2, domain 6 | 649 | 1e-67 | 35% (123/351) | RNA_pol_Rpb2_6 | | 1 | | |
| pfam2 | PF04563 | pfam04563, RNA_pol_Rpb2_1, RNA polymerase beta subunit | 267 | 3e-23 | 26% (64/241) | RNA_pol_Rpb2_1 | | 2 | | |
| pfam3 | PF04565 | pfam04565, RNA_pol_Rpb2_3, RNA polymerase Rpb2, domain 3 | 302 | 2e-27 | 67% (49/73) | RNA_pol_Rpb2_3 | | 3 | | |
| pfam4 | PF04560 | pfam04560, RNA_pol_Rpb2_7, RNA polymerase Rpb2, domain 7 | 293 | 3e-26 | 54% (44/81) | RNA_pol_Rpb2_7 | | 4 | | |
| pfam5 | PF04561 | pfam04561, RNA_pol_Rpb2_2, RNA polymerase Rpb2, domain 2 | 108 | 8e-05 | 30% (25/82) | RNA_pol_Rpb2_2 | | 5 | | |