Detailed annotation info for RP140; DNA-DIRECTED RNA POLYMERASE BETA CHAIN (EC 2.7.7.6) (TRANSCRIPTASE BETA CHAIN) (RNA POLYMERASE BETA SUBUNIT) (FRAGMENT).
Annotation NameDNA-directed RNA polymerase beta chain related cluster
Score6953&emsp
E-value0.0
% Sequence Identity99% (1363/1374)
LocusRPOB
EC Number2.7.7.6
COG Function Transcription
KEGG Pathway Purine metabolism Pyrimidine metabolism RNA polymerase
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
uniref90UniRef90_O52271DNA-directed RNA polymerase beta chain related cluster69530.099% (1363/1374)RPOB2.7.7.61GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0006350|transcription|IEA; GO:0006351|transcription, DNA-dependent|IEA; GO:0016740|transferase activity|IEA; GO:0046677|response to antibiotic|IEA
nrYP_067096DNA-directed RNA polymerase beta subunit; RNA nucleotidyltransferase (DNA-directed).; RNA polymerase I.; RNA polymerase II.; RNA polymerase III. [Rickettsia typhi str. Wilmington] gb|AAU03614.1| DNA-directed RNA polymerase beta subunit; RNA nucleotidyltransferase (DNA-directed).; RNA polymerase I.; RNA polymerase II.; RNA polymerase III. [Rickettsia typhi str. Wilmington] sp|P77941|RPOB_RICTY DNA-directed RNA polymerase beta chain (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit)68260.097% (1333/1374)3
cogRP140[K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit69530.099% (1363/1374)1 Transcription
keggrty:RT0129rpoB; DNA-directed RNA polymerase beta subunit [EC:2.7.7.6] [KO:K03043]68260.097% (1333/1374)rpoB2.7.7.62 Purine metabolism Pyrimidine metabolism RNA polymerase
smartNo hits found0
pfamPF00562pfam00562, RNA_pol_Rpb2_6, RNA polymerase Rpb2, domain 66491e-6735% (123/351)RNA_pol_Rpb2_61
pfam2PF04563pfam04563, RNA_pol_Rpb2_1, RNA polymerase beta subunit2673e-2326% (64/241)RNA_pol_Rpb2_12
pfam3PF04565pfam04565, RNA_pol_Rpb2_3, RNA polymerase Rpb2, domain 33022e-2767% (49/73)RNA_pol_Rpb2_33
pfam4PF04560pfam04560, RNA_pol_Rpb2_7, RNA polymerase Rpb2, domain 72933e-2654% (44/81)RNA_pol_Rpb2_74
pfam5PF04561pfam04561, RNA_pol_Rpb2_2, RNA polymerase Rpb2, domain 21088e-0530% (25/82)RNA_pol_Rpb2_25