| pfam8 | PF04495 | pfam04495, GRASP55_65, GRASP55/65 family | 177 | 1e-12 | 22% (46/206) | GRASP55_65 | | 7 | | |
| pfam9 | PF05110 | pfam05110, AF-4, AF-4 proto-oncoprotein | 181 | 5e-13 | 18% (99/543) | AF-4 | | 8 | | |
| pfam10 | PF03326 | pfam03326, Herpes_TAF50, Herpesvirus transcription activation factor (transactivator) | 147 | 4e-09 | 19% (57/296) | Herpes_TAF50 | | 9 | | |
| Annotation Name | RERE related cluster |
| Score | 4980&emsp |
| E-value | 0.0 |
| % Sequence Identity | 65% (1006/1535) |
| Locus | Rere |
| EC Number | |
| COG Function | |
| KEGG Pathway | Dentatorubropallidoluysian atrophy (DRPLA) |
| Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
| uniref90 | UniRef90_Q9P2R6 | RERE related cluster | 4980 | 0.0 | 65% (1006/1535) | | | 1 | | GO:0000004|biological_process unknown|ND; GO:0003677|DNA binding|IEA; GO:0003700|transcription factor activity|IEA; GO:0005515|protein binding|NAS; GO:0005634|nucleus|IEA; GO:0005634|nucleus|NAS; GO:0006355|regulation of transcription, DNA-dependent|IEA |
| nr | XP_204015 | arginine glutamic acid dipeptide (RE) repeats [Mus musculus] | 4479 | 0.0 | 60% (929/1544) | | | 4 | | |
| cog | | No hits found | | | | | | 0 | | |
| kegg | mmu:68703 | Rere; arginine glutamic acid dipeptide (RE) repeats [KO:K05628] | 4479 | 0.0 | 60% (929/1535) | Rere | | 2 | Dentatorubropallidoluysian atrophy (DRPLA) | |
| smart | 00401 | smart00401, ZnF_GATA, zinc finger binding to DNA consensus sequence [AT]GATA[AG] ; | 151 | 5e-11 | 37% (19/51) | ZnF_GATA | | 1 | | |
| smart2 | 00439 | smart00439, BAH, Bromo adjacent homology domain; | 133 | 6e-09 | 18% (33/180) | BAH | | 2 | | |
| smart3 | 00717 | smart00717, SANT, SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains; | 97 | 8e-05 | 27% (13/47) | SANT | | 3 | | |
| pfam | PF03154 | pfam03154, Atrophin-1, Atrophin-1 family | 114 | 3e-05 | 21% (115/544) | Atrophin-1 | | 1 | | |
| pfam2 | PF03157 | pfam03157, Glutenin_hmw, High molecular weight glutenin subunit | 155 | 5e-10 | 25% (85/338) | Glutenin_hmw | | 10 | | |
| pfam3 | PF04554 | pfam04554, Extensin_2, Extensin-like region | 256 | 1e-21 | 24% (83/339) | Extensin_2 | | 2 | | |
| pfam4 | PF03251 | pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd protein | 234 | 4e-19 | 21% (99/452) | Tymo_45kd_70kd | | 3 | | |
| pfam5 | PF07223 | pfam07223, DUF1421, Protein of unknown function (DUF1421) | 222 | 9e-18 | 26% (79/296) | DUF1421 | | 4 | | |
| pfam6 | PF05471 | pfam05471, Podocalyxin, Podocalyxin | 190 | 5e-14 | 19% (76/393) | Podocalyxin | | 5 | | |
| pfam7 | PF06346 | pfam06346, Drf_FH1, Formin Homology Region 1 | 190 | 5e-14 | 36% (63/173) | Drf_FH1 | | 6 | | |