Detailed annotation info for ENST00000240185; TAR DNA-binding protein-43 (TDP-43). [Source:Uniprot/SWISSPROT;Acc:Q13148]
Annotation NameTAR DNA-binding protein-43 related cluster
Score1543&emsp
E-value1e-171
% Sequence Identity74% (308/414)
LocusTardbp
EC Number
COG Function General function prediction only
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
uniref90UniRef90_Q13148TAR DNA-binding protein-43 related cluster15431e-17174% (308/414)1GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003677|DNA binding|IEA; GO:0003700|transcription factor activity|TAS; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0005634|nucleus|TAS; GO:0006355|regulation of transcription, DNA-dependent|IEA; GO:0006366|transcription from Pol II promoter|TAS; GO:0006397|mRNA processing|IEA; GO:0007067|mitosis|TAS; GO:0008017|microtubule binding|TAS
nrNP_663531TAR DNA binding protein isoform 1 [Mus musculus] gb|AAH25544.1| TAR DNA binding protein [Mus musculus] gb|AAH27772.1| TAR DNA binding protein [Mus musculus] gb|AAH31126.1| TAR DNA binding protein [Mus musculus] gb|AAH33475.1| TAR DNA binding protein [Mus musculus] gb|AAH12873.1| TAR DNA binding protein [Mus musculus] sp|Q921F2|TDBP_MOUSE TAR DNA-binding protein-43 (TDP-43) dbj|BAC27753.1| unnamed protein product [Mus musculus]14981e-16471% (297/414)3
cogSPBC660.15[R] COG0724 RNA-binding proteins (RRM domain)2635e-2235% (62/177)1 General function prediction only
keggmmu:230908Tardbp; TAR DNA binding protein14981e-16671% (297/414)Tardbp2
smart00360smart00360, RRM, RNA recognition motif;1423e-1040% (22/54)RRM1
pfamPF00076pfam00076, RRM_1, RNA recognition motif1275e-0732% (17/52)RRM_11
pfam2PF07132pfam07132, Harpin, Harpin protein (HrpN)1096e-0531% (47/151)Harpin2