Detailed annotation info for ACL00009305;
Annotation NameU2 snRNP auxiliary factor, small subunit related cluster
Score160&emsp
E-value6e-31
% Sequence Identity56% (27/48)
Locus
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q9FMY5U2 snRNP auxiliary factor, small subunit related cluster1606e-3156% (27/48)1GO:0003676|nucleic acid binding|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA
nrNP_174086U2 snRNP auxiliary factor small subunit, putative [Arabidopsis thaliana] gb|AAD46002.1| Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small subunit from Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come from this gene. [Arabidopsis thaliana] gb|AAF24943.1| T22C5.10 [Arabidopsis thaliana] gb|AAK06875.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana] gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana] gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]1733e-3150% (30/60)1
cogSPAP8A3.061561e-2453% (28/52)0
keggath:At1g27650T17H3.14; U2 snRNP auxiliary factor small subunit, putative1736e-3250% (30/60)1
smart00356smart00356, ZnF_C3H1, zinc finger;878e-0524% (6/25)ZnF_C3H11
pfamNo hits found0
est_othersBJ212480BJ212480 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum cDNA clone wh17k19 5'.1717e-3851% (31/60)1