Detailed annotation info for ACL00009305;
Annotation Name | U2 snRNP auxiliary factor, small subunit related cluster | |||||||||
Score | 160&emsp![]() | |||||||||
E-value | 6e-31 | |||||||||
% Sequence Identity | 56% (27/48) | |||||||||
Locus | ||||||||||
EC Number | ||||||||||
COG Function | ||||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q9FMY5 | U2 snRNP auxiliary factor, small subunit related cluster | 160 | 6e-31 | 56% (27/48) | 1 | GO:0003676|nucleic acid binding|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA | |||
nr | NP_174086 | U2 snRNP auxiliary factor small subunit, putative [Arabidopsis thaliana] gb|AAD46002.1| Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small subunit from Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come from this gene. [Arabidopsis thaliana] gb|AAF24943.1| T22C5.10 [Arabidopsis thaliana] gb|AAK06875.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana] gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana] gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana] | 173 | 3e-31 | 50% (30/60) | 1 | ||||
cog | SPAP8A3.06 | 156 | 1e-24 | 53% (28/52) | 0 | |||||
kegg | ath:At1g27650 | T17H3.14; U2 snRNP auxiliary factor small subunit, putative | 173 | 6e-32 | 50% (30/60) | 1 | ||||
smart | 00356 | smart00356, ZnF_C3H1, zinc finger; | 87 | 8e-05 | 24% (6/25) | ZnF_C3H1 | 1 | |||
pfam | No hits found | 0 | ||||||||
est_others | BJ212480 | BJ212480 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum cDNA clone wh17k19 5'. | 171 | 7e-38 | 51% (31/60) | 1 |