Detailed annotation info for ACL00009212;
Annotation Name | Splicing factor U2AF 50 kDa subunit related cluster | |||||||||
Score | 372&emsp![]() | |||||||||
E-value | 7e-35 | |||||||||
% Sequence Identity | 52% (74/140) | |||||||||
Locus | CG9998 | |||||||||
EC Number | ||||||||||
COG Function | ||||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q24562 | Splicing factor U2AF 50 kDa subunit related cluster | 372 | 7e-35 | 52% (74/140) | 2 | GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0005686|snRNP U2|TAS; GO:0006397|mRNA processing|IEA; GO:0008187|poly-pyrimidine tract binding|IDA; GO:0008248|pre-mRNA splicing factor activity|IMP | |||
nr | NP_009210 | U2 small nuclear ribonucleoprotein auxiliary factor (65kD); splicing factor U2AF 65 kD subunit; U2 snRNP auxiliary factor large subunit [Homo sapiens] sp|P26368|U2AF_HUMAN Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (hU2AF(65)) emb|CAA45409.1| splicing factor U2AF [Homo sapiens] | 371 | 2e-34 | 50% (70/140) | 5 | ||||
cog | SPBC146.07 | [R] COG0724 RNA-binding proteins (RRM domain) | 136 | 4e-08 | 29% (41/138) | 1 | General function prediction only | |||
kegg | dme:CG9998-PA | CG9998; U2 small nuclear riboprotein auxiliary factor 50 | 372 | 6e-35 | 52% (74/140) | CG9998 | 1 | |||
smart | 00360 | smart00360, RRM, RNA recognition motif; | 113 | 1e-07 | 29% (25/84) | RRM | 1 | |||
pfam | PF03276 | pfam03276, Gag_spuma, Spumavirus gag protein | 116 | 2e-06 | 25% (38/149) | Gag_spuma | 1 | |||
pfam2 | PF05518 | pfam05518, Totivirus_coat, Totivirus coat protein | 114 | 3e-06 | 27% (33/121) | Totivirus_coat | 2 | |||
est_others | CF239486 | AGENCOURT_15099508 NICHD_XGC_Emb6 Xenopus tropicalis cDNA clone IMAGE:6995427 5'. | 146 | 3e-41 | 68% (26/38) | 1 |