Detailed annotation info for ACL00009212;
Annotation NameSplicing factor U2AF 50 kDa subunit related cluster
Score372&emsp
E-value7e-35
% Sequence Identity52% (74/140)
LocusCG9998
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q24562Splicing factor U2AF 50 kDa subunit related cluster3727e-3552% (74/140)2GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0005686|snRNP U2|TAS; GO:0006397|mRNA processing|IEA; GO:0008187|poly-pyrimidine tract binding|IDA; GO:0008248|pre-mRNA splicing factor activity|IMP
nrNP_009210U2 small nuclear ribonucleoprotein auxiliary factor (65kD); splicing factor U2AF 65 kD subunit; U2 snRNP auxiliary factor large subunit [Homo sapiens] sp|P26368|U2AF_HUMAN Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (hU2AF(65)) emb|CAA45409.1| splicing factor U2AF [Homo sapiens]3712e-3450% (70/140)5
cogSPBC146.07[R] COG0724 RNA-binding proteins (RRM domain)1364e-0829% (41/138)1 General function prediction only
keggdme:CG9998-PACG9998; U2 small nuclear riboprotein auxiliary factor 503726e-3552% (74/140)CG99981
smart00360smart00360, RRM, RNA recognition motif;1131e-0729% (25/84)RRM1
pfamPF03276pfam03276, Gag_spuma, Spumavirus gag protein1162e-0625% (38/149)Gag_spuma1
pfam2PF05518pfam05518, Totivirus_coat, Totivirus coat protein1143e-0627% (33/121)Totivirus_coat2
est_othersCF239486AGENCOURT_15099508 NICHD_XGC_Emb6 Xenopus tropicalis cDNA clone IMAGE:6995427 5'.1463e-4168% (26/38)1