Detailed annotation info for ACL00009131;
Annotation Name | Pre-mRNA cleavage complex II protein Clp1 related cluster | |||||||||
Score | 304&emsp![]() | |||||||||
E-value | 2e-27 | |||||||||
% Sequence Identity | 43% (62/141) | |||||||||
Locus | ||||||||||
EC Number | ||||||||||
COG Function | RNA processing and modification | |||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q92989 | Pre-mRNA cleavage complex II protein Clp1 related cluster | 304 | 2e-27 | 43% (62/141) | 3 | GO:0005524|ATP binding|IEA; GO:0005524|ATP binding|TAS; GO:0005525|GTP binding|TAS; GO:0005634|nucleus|IEA; GO:0006397|mRNA processing|IEA | |||
nr | XP_464661 | putative ATP/GTP-binding protein [Oryza sativa (japonica cultivar-group)] dbj|BAD17173.1| putative ATP/GTP-binding protein [Oryza sativa (japonica cultivar-group)] | 404 | 1e-38 | 51% (71/139) | 1 | ||||
cog | YOR250c | [A] COG5623 Pre-mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1 | 149 | 6e-10 | 32% (46/142) | 1 | RNA processing and modification | |||
kegg | ath:At3g04680 | F7O18.15; pre-mRNA cleavage complex family protein | 363 | 3e-34 | 46% (65/140) | 2 | ||||
smart | No hits found | 0 | ||||||||
pfam | PF06807 | pfam06807, Clp1, Pre-mRNA cleavage complex II protein Clp1 | 398 | 2e-39 | 43% (68/158) | Clp1 | 1 | |||
est_others | CA093251 | SCCCCL3002A06.b CL3 Saccharum officinarum cDNA clone SCCCCL3002A06 3'. | 429 | 3e-49 | 52% (73/139) | 1 |