Detailed annotation info for ACL00008749;
Annotation NameDNA-directed RNA polymerase II 14.5 kDa polypeptide related cluster
Score190&emsp
E-value3e-14
% Sequence Identity47% (35/73)
LocusRPB9
EC Number2.7.7.6
COG Function Transcription
KEGG Pathway Purine metabolism Pyrimidine metabolism RNA polymerase
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_P36954DNA-directed RNA polymerase II 14.5 kDa polypeptide related cluster1903e-1447% (35/73)RPB92.7.7.61GO:0003677|DNA binding|IEA; GO:0003700|transcription factor activity|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0003899|DNA-directed RNA polymerase activity|TAS; GO:0005634|nucleus|IEA; GO:0005665|DNA-directed RNA polymerase II, core complex|NR; GO:0006350|transcription|IEA; GO:0006354|RNA elongation|IEA; GO:0006355|regulation of transcription, DNA-dependent|IEA; GO:0006366|transcription from Pol II promoter|TAS; GO:0008270|zinc ion binding|TAS; GO:0016740|transferase activity|IEA
nrNP_188323DNA-directed RNA polymerase II, putative [Arabidopsis thaliana] gb|AAS76204.1| At3g16980 [Arabidopsis thaliana] gb|AAS88753.1| At3g16980 [Arabidopsis thaliana]2023e-1552% (38/73)1
cogSPAPYUG7.04c[K] COG1594 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS1304e-0836% (27/74)1 Transcription
keggath:At3g16980K14A17.16; DNA-directed RNA polymerase II, putative [EC:2.7.7.6] [KO:K03017]2027e-1652% (38/73)2.7.7.61 Purine metabolism Pyrimidine metabolism RNA polymerase
smart00440smart00440, ZnF_C2C2, C2C2 Zinc finger; Nucleic-acid-binding motif in transcriptional elongation factor TFIIS and RNA polymerases1002e-0642% (17/40)ZnF_C2C21
pfamNo hits found0
est_othersCK458598922985 MARC 4PIG Sus scrofa cDNA 5'.1927e-1748% (36/75)1