Detailed annotation info for ACL00008607;
Annotation Name | DNA-directed RNA polymerase I 40 kDa polypeptide related cluster | |||||||||
Score | 618&emsp![]() | |||||||||
E-value | 2e-63 | |||||||||
% Sequence Identity | 52% (126/238) | |||||||||
Locus | RPA5 | |||||||||
EC Number | 2.7.7.6 | |||||||||
COG Function | Transcription | |||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_O15160 | DNA-directed RNA polymerase I 40 kDa polypeptide related cluster | 618 | 2e-63 | 52% (126/238) | RPA5 | 2.7.7.6 | 2 | GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0003899|DNA-directed RNA polymerase activity|TAS; GO:0005634|nucleus|IEA; GO:0005736|DNA-directed RNA polymerase I complex|TAS; GO:0006350|transcription|IEA; GO:0006360|transcription from Pol I promoter|TAS; GO:0016740|transferase activity|IEA; GO:0046983|protein dimerization activity|IEA | |
nr | XP_217347 | similar to DNA-directed RNA polymerase I 40 kDa polypeptide (RPA40) [Rattus norvegicus] | 626 | 6e-64 | 52% (126/239) | 1 | ||||
cog | SPBC1289.07c | [K] COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit | 562 | 2e-57 | 48% (119/243) | 1 | Transcription | |||
kegg | ddi:ng6187 | RNA polymerase subunit (isoform B) | 682 | 7e-71 | 56% (132/234) | 1 | ||||
smart | 00662 | smart00662, RPOLD, RNA polymerases D; DNA-directed RNA polymerase subunit D and bacterial alpha chain | 509 | 2e-53 | 38% (87/228) | RPOLD | 1 | |||
pfam | PF01193 | pfam01193, RNA_pol_L, RNA polymerase Rpb3/Rpb11 dimerisation domain | 317 | 8e-30 | 29% (51/171) | RNA_pol_L | 1 | |||
pfam2 | PF01000 | pfam01000, RNA_pol_A_bac, RNA polymerase Rpb3/RpoA insert domain | 203 | 1e-16 | 26% (36/138) | RNA_pol_A_bac | 2 | |||
est_others | BP463997 | BP463997 full-length enriched swine cDNA library, adult uterus Sus scrofa cDNA clone UTR010057E08 5'. | 281 | 3e-65 | 67% (50/74) | 1 |