Detailed annotation info for ACL00008607;
Annotation NameDNA-directed RNA polymerase I 40 kDa polypeptide related cluster
Score618&emsp
E-value2e-63
% Sequence Identity52% (126/238)
LocusRPA5
EC Number2.7.7.6
COG Function Transcription
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_O15160DNA-directed RNA polymerase I 40 kDa polypeptide related cluster6182e-6352% (126/238)RPA52.7.7.62GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0003899|DNA-directed RNA polymerase activity|TAS; GO:0005634|nucleus|IEA; GO:0005736|DNA-directed RNA polymerase I complex|TAS; GO:0006350|transcription|IEA; GO:0006360|transcription from Pol I promoter|TAS; GO:0016740|transferase activity|IEA; GO:0046983|protein dimerization activity|IEA
nrXP_217347similar to DNA-directed RNA polymerase I 40 kDa polypeptide (RPA40) [Rattus norvegicus]6266e-6452% (126/239)1
cogSPBC1289.07c[K] COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit5622e-5748% (119/243)1 Transcription
keggddi:ng6187RNA polymerase subunit (isoform B)6827e-7156% (132/234)1
smart00662smart00662, RPOLD, RNA polymerases D; DNA-directed RNA polymerase subunit D and bacterial alpha chain5092e-5338% (87/228)RPOLD1
pfamPF01193pfam01193, RNA_pol_L, RNA polymerase Rpb3/Rpb11 dimerisation domain3178e-3029% (51/171)RNA_pol_L1
pfam2PF01000pfam01000, RNA_pol_A_bac, RNA polymerase Rpb3/RpoA insert domain2031e-1626% (36/138)RNA_pol_A_bac2
est_othersBP463997BP463997 full-length enriched swine cDNA library, adult uterus Sus scrofa cDNA clone UTR010057E08 5'.2813e-6567% (50/74)1