| pfam8 | PF05110 | pfam05110, AF-4, AF-4 proto-oncoprotein | 111 | 5e-06 | 15% (27/172) | AF-4 | | 8 | | |
| Annotation Name | Putative pre-mRNA splicing factor ATP-dependent RNA helicase related cluster |
| Score | 686&emsp |
| E-value | 2e-71 |
| % Sequence Identity | 73% (117/160) |
| Locus | |
| EC Number | |
| COG Function | Replication, recombination and repair |
| KEGG Pathway | |
| Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
| SSU | | No hits found | | | | | | 0 | | |
| LSU | | No hits found | | | | | | 0 | | |
| uniref90 | UniRef90_Q38953 | Putative pre-mRNA splicing factor ATP-dependent RNA helicase related cluster | 686 | 2e-71 | 73% (117/160) | | | 1 | | GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003676|nucleic acid binding|IEA; GO:0003723|RNA binding|IEA; GO:0004386|helicase activity|IEA; GO:0005524|ATP binding|IEA; GO:0005634|nucleus|IEA; GO:0006397|mRNA processing|IEA; GO:0008026|ATP-dependent helicase activity|IEA |
| nr | XP_465115 | putative RNA helicase [Oryza sativa (japonica cultivar-group)] dbj|BAD23339.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)] | 690 | 1e-71 | 73% (118/160) | | | 1 | | |
| cog | SPAC10F6.02c_2 | [L] COG1643 HrpA-like helicases | 450 | 1e-44 | 49% (79/159) | | | 1 | Replication, recombination and repair | |
| kegg | ath:At3g26560 | MFE16.8; ATP-dependent RNA helicase, putative | 686 | 2e-71 | 73% (117/160) | | | 1 | | |
| smart | | No hits found | | | | | | 0 | | |
| pfam | PF04484 | pfam04484, DUF566, Family of unknown function (DUF566) | 124 | 1e-07 | 20% (35/173) | DUF566 | | 1 | | |
| pfam2 | PF05109 | pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1) | 127 | 7e-08 | 20% (42/206) | Herpes_BLLF1 | | 2 | | |
| pfam3 | PF05471 | pfam05471, Podocalyxin, Podocalyxin | 117 | 1e-06 | 18% (37/201) | Podocalyxin | | 3 | | |
| pfam4 | PF05956 | pfam05956, APC_basic, APC basic domain | 117 | 1e-06 | 25% (34/134) | APC_basic | | 4 | | |
| pfam5 | PF05539 | pfam05539, Pneumo_att_G, Pneumovirinae attachment membrane glycoprotein G | 117 | 1e-06 | 28% (44/155) | Pneumo_att_G | | 5 | | |
| pfam6 | PF03154 | pfam03154, Atrophin-1, Atrophin-1 family | 113 | 3e-06 | 23% (35/152) | Atrophin-1 | | 6 | | |
| pfam7 | PF05955 | pfam05955, Herpes_gp2, Equine herpesvirus glycoprotein gp2 | 110 | 6e-06 | 19% (32/165) | Herpes_gp2 | | 7 | | |
| est_others | AI714463 | 606016B04.x2 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA. | 398 | 6e-45 | 58% (95/163) | | | 1 | | |