Detailed annotation info for ACL00004640;
Annotation NamePre-mRNA splicing factor srp1 related cluster
Score156&emsp
E-value1e-09
% Sequence Identity48% (35/72)
Locussrp1
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q10193Pre-mRNA splicing factor srp1 related cluster1561e-0948% (35/72)1GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0006397|mRNA processing|IEA
nrT48696mRNA splicing factor srp1 [imported] - fission yeast (Schizosaccharomyces pombe) gb|AAC49909.1| Srp1 [Schizosaccharomyces pombe]1563e-0948% (35/72)4
cogSPBC11C11.081563e-1048% (35/72)0
keggspo:SPBC11C11.08srp1; putative splicing protein, rna binding1561e-0948% (35/72)srp11
smart00360smart00360, RRM, RNA recognition motif;1382e-1036% (24/65)RRM1
pfamPF04094pfam04094, DUF390, Protein of unknown function (DUF390)1432e-0925% (64/253)DUF3901
pfam2PF05624pfam05624, LISCH7, LISCH71314e-0828% (56/198)LISCH72
pfam3PF00076pfam00076, RRM_1, RNA recognition motif1252e-0735% (23/64)RRM_13
est_othersCD269360T143A00120 (FHIG:A) Ectomycorrhiza plate culture Betula pendula/Paxillus involutus mixed EST library cDNA 5'.766e-1030% (14/46)1