Detailed annotation info for ACL00004640;
Annotation Name | Pre-mRNA splicing factor srp1 related cluster | |||||||||
Score | 156&emsp![]() | |||||||||
E-value | 1e-09 | |||||||||
% Sequence Identity | 48% (35/72) | |||||||||
Locus | srp1 | |||||||||
EC Number | ||||||||||
COG Function | ||||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q10193 | Pre-mRNA splicing factor srp1 related cluster | 156 | 1e-09 | 48% (35/72) | 1 | GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0006397|mRNA processing|IEA | |||
nr | T48696 | mRNA splicing factor srp1 [imported] - fission yeast (Schizosaccharomyces pombe) gb|AAC49909.1| Srp1 [Schizosaccharomyces pombe] | 156 | 3e-09 | 48% (35/72) | 4 | ||||
cog | SPBC11C11.08 | 156 | 3e-10 | 48% (35/72) | 0 | |||||
kegg | spo:SPBC11C11.08 | srp1; putative splicing protein, rna binding | 156 | 1e-09 | 48% (35/72) | srp1 | 1 | |||
smart | 00360 | smart00360, RRM, RNA recognition motif; | 138 | 2e-10 | 36% (24/65) | RRM | 1 | |||
pfam | PF04094 | pfam04094, DUF390, Protein of unknown function (DUF390) | 143 | 2e-09 | 25% (64/253) | DUF390 | 1 | |||
pfam2 | PF05624 | pfam05624, LISCH7, LISCH7 | 131 | 4e-08 | 28% (56/198) | LISCH7 | 2 | |||
pfam3 | PF00076 | pfam00076, RRM_1, RNA recognition motif | 125 | 2e-07 | 35% (23/64) | RRM_1 | 3 | |||
est_others | CD269360 | T143A00120 (FHIG:A) Ectomycorrhiza plate culture Betula pendula/Paxillus involutus mixed EST library cDNA 5'. | 76 | 6e-10 | 30% (14/46) | 1 |