Detailed annotation info for ACL00004594;
Annotation Name | MDA7.19; transducin / WD-40 repeat protein family | |||||||||
Score | 762&emsp![]() | |||||||||
E-value | 4e-80 | |||||||||
% Sequence Identity | 56% (141/249) | |||||||||
Locus | ||||||||||
EC Number | ||||||||||
COG Function | General function prediction only | |||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q96J01 | THO complex subunit 3 related cluster | 680 | 1e-70 | 52% (124/238) | 2 | GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0006397|mRNA processing|IEA; GO:0006406|mRNA-nucleus export|IEA; GO:0006810|transport|IEA | |||
nr | NP_200424 | transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09295.1| unnamed protein product [Arabidopsis thaliana] gb|AAM13119.1| unknown protein [Arabidopsis thaliana] gb|AAN15493.1| unknown protein [Arabidopsis thaliana] | 762 | 1e-79 | 56% (141/249) | 1 | ||||
cog | SPCC18B5.10c | [R] COG2319 FOG: WD40 repeat | 501 | 2e-50 | 39% (94/241) | 1 | General function prediction only | |||
kegg | ath:At5g56130 | MDA7.19; transducin / WD-40 repeat protein family | 762 | 4e-80 | 56% (141/249) | 1 | ||||
smart | 00320 | smart00320, WD40, WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain | 117 | 5e-08 | 40% (16/40) | WD40 | 1 | |||
pfam | PF00400 | pfam00400, WD40, WD domain, G-beta repeat | 115 | 2e-06 | 42% (16/38) | WD40 | 1 | |||
est_others | CF511348 | CAbud0002_IIF_D10 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0002_IIF_D10 5'. | 239 | 4e-44 | 54% (54/100) | 1 |