Detailed annotation info for ACL00004146;
Annotation NameU1 small nuclear ribonucleoprotein A related cluster
Score347&emsp
E-value2e-32
% Sequence Identity67% (62/92)
Locus
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_P43332U1 small nuclear ribonucleoprotein A related cluster3472e-3267% (62/92)1GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0005634|nucleus|TAS; GO:0005681|spliceosome complex|IEA; GO:0007539|primary sex determination, soma|NAS; GO:0008248|pre-mRNA splicing factor activity|TAS; GO:0008380|RNA splicing|TAS; GO:0009993|oogenesis (sensu Insecta)|TAS; GO:0019099|female germ-line sex determination|NAS; GO:0030529|ribonucleoprotein complex|IEA; GO:0030532|small nuclear ribonucleoprotein complex|IDA
nr1FHTRna-Binding Domain Of The U1a Spliceosomal Protein U1a117, Nmr, 43 Structures3412e-3163% (58/92)2
cogSPBC8D2.09c[R] COG0724 RNA-binding proteins (RRM domain)2595e-2358% (51/87)1 General function prediction only
keggdme:CG4528-PAsnf; sans fille3471e-3267% (62/92)snf1
smart00360smart00360, RRM, RNA recognition motif;1494e-1235% (27/77)RRM1
pfamPF00076pfam00076, RRM_1, RNA recognition motif1344e-0929% (22/74)RRM_11
est_othersAI294521LP07917.5prime LP Drosophila melanogaster larval-early pupal pOT2 Drosophila melanogaster cDNA clone LP07917 5prime similar to L29521: Drosophila melanogaster nuclear protein (snf) gene, complete cds..1697e-1452% (49/94)1