Detailed annotation info for ACL00003737;
Annotation NamesnoRNP protein gar1 related cluster
Score260&emsp
E-value2e-22
% Sequence Identity46% (48/104)
Locusgar1
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q06975snoRNP protein gar1 related cluster2602e-2246% (48/104)1GO:0005634|nucleus|IEA; GO:0006364|rRNA processing|IEA; GO:0007046|ribosome biogenesis|IEA; GO:0019843|rRNA binding|IEA; GO:0030529|ribonucleoprotein complex|IEA; GO:0030532|small nuclear ribonucleoprotein complex|IEA
nrNP_596365pre-mrna processing protein Gar1p [Schizosaccharomyces pombe] sp|Q06975|GAR1_SCHPO snoRNP protein gar1 pir||S33691 GAR1 protein - fission yeast (Schizosaccharomyces pombe) emb|CAA79628.1| snoRNP protein GAR1 [Schizosaccharomyces pombe] dbj|BAA19143.1| snoRNP protein GAR 1 [Schizosaccharomyces pombe] emb|CAB08787.1| ribonucleoprotein (RNP) complex (PMID 8502556); small nuclear ribonucleoprotein (snRNP); involved in rRNA processing (required) (PMID 7596817); localization nucleolus (PMID 7596817); RNA-binding protein; similar to S. cerevisiae YHR089C [Schizosaccharomyces pombe] emb|CAA16841.1| gar1 [Schizosaccharomyces pombe]2605e-2246% (48/104)2
cogSPBC20F10.01[J] COG3277 RNA-binding protein involved in rRNA processing2606e-2346% (48/104)1 Translation, ribosomal structure and biogenesis
keggspo:SPBC20F10.01gar1; pre-mrna processing protein Gar1p2601e-2246% (48/104)gar11
smartNo hits found0
pfamPF04410pfam04410, Gar1, Gar1 protein RNA binding region2711e-2449% (51/103)Gar11
est_othersBE515623WHE0601_D04_G07ZA Wheat ABA-treated embryo cDNA library Triticum aestivum cDNA clone WHE0601_D04_G07.806e-2356% (14/25)1