Detailed annotation info for ACL00003737;
Annotation Name | snoRNP protein gar1 related cluster | |||||||||
Score | 260&emsp![]() | |||||||||
E-value | 2e-22 | |||||||||
% Sequence Identity | 46% (48/104) | |||||||||
Locus | gar1 | |||||||||
EC Number | ||||||||||
COG Function | ||||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q06975 | snoRNP protein gar1 related cluster | 260 | 2e-22 | 46% (48/104) | 1 | GO:0005634|nucleus|IEA; GO:0006364|rRNA processing|IEA; GO:0007046|ribosome biogenesis|IEA; GO:0019843|rRNA binding|IEA; GO:0030529|ribonucleoprotein complex|IEA; GO:0030532|small nuclear ribonucleoprotein complex|IEA | |||
nr | NP_596365 | pre-mrna processing protein Gar1p [Schizosaccharomyces pombe] sp|Q06975|GAR1_SCHPO snoRNP protein gar1 pir||S33691 GAR1 protein - fission yeast (Schizosaccharomyces pombe) emb|CAA79628.1| snoRNP protein GAR1 [Schizosaccharomyces pombe] dbj|BAA19143.1| snoRNP protein GAR 1 [Schizosaccharomyces pombe] emb|CAB08787.1| ribonucleoprotein (RNP) complex (PMID 8502556); small nuclear ribonucleoprotein (snRNP); involved in rRNA processing (required) (PMID 7596817); localization nucleolus (PMID 7596817); RNA-binding protein; similar to S. cerevisiae YHR089C [Schizosaccharomyces pombe] emb|CAA16841.1| gar1 [Schizosaccharomyces pombe] | 260 | 5e-22 | 46% (48/104) | 2 | ||||
cog | SPBC20F10.01 | [J] COG3277 RNA-binding protein involved in rRNA processing | 260 | 6e-23 | 46% (48/104) | 1 | Translation, ribosomal structure and biogenesis | |||
kegg | spo:SPBC20F10.01 | gar1; pre-mrna processing protein Gar1p | 260 | 1e-22 | 46% (48/104) | gar1 | 1 | |||
smart | No hits found | 0 | ||||||||
pfam | PF04410 | pfam04410, Gar1, Gar1 protein RNA binding region | 271 | 1e-24 | 49% (51/103) | Gar1 | 1 | |||
est_others | BE515623 | WHE0601_D04_G07ZA Wheat ABA-treated embryo cDNA library Triticum aestivum cDNA clone WHE0601_D04_G07. | 80 | 6e-23 | 56% (14/25) | 1 |