Detailed annotation info for ACL00003252;
Annotation Name | Transcription elongation factor B polypeptide 1 related cluster | |||||||||
Score | 285&emsp![]() | |||||||||
E-value | 3e-25 | |||||||||
% Sequence Identity | 61% (57/93) | |||||||||
Locus | Tceb1 | |||||||||
EC Number | ||||||||||
COG Function | ||||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q15369 | Transcription elongation factor B polypeptide 1 related cluster | 285 | 3e-25 | 61% (57/93) | 2 | GO:0003711|transcriptional elongation regulator activity|NR; GO:0005515|protein binding|TAS; GO:0005634|nucleus|IEA; GO:0006355|regulation of transcription, DNA-dependent|IEA; GO:0006357|regulation of transcription from Pol II promoter|TAS; GO:0006512|ubiquitin cycle|IEA | |||
nr | 1LM8 | Chain C, Structure Of A Hif-1a-Pvhl-Elonginb-Elonginc Complex pdb|1LQB|B Chain B, Crystal Structure Of A Hydroxylated Hif-1 Alpha Peptide Bound To The PvhlELONGIN-CELONGIN-B Complex | 285 | 7e-25 | 61% (57/93) | 2 | ||||
cog | SPBC1861.07 | 150 | 4e-10 | 37% (36/97) | 0 | |||||
kegg | rno:64525 | Tceb1; elongation factor SIII p15 subunit | 285 | 3e-25 | 61% (57/93) | Tceb1 | 1 | |||
smart | 00512 | smart00512, Skp1, Found in Skp1 protein family; Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues | 216 | 1e-19 | 33% (35/104) | Skp1 | 1 | |||
pfam | PF03931 | pfam03931, Skp1_POZ, Skp1 family, tetramerisation domain | 178 | 6e-14 | 39% (24/61) | Skp1_POZ | 1 | |||
est_others | BM283456 | ki54d06.y1 Ascaris suum male gut SL1 TOPO v1 Murphy Chiapelli McCarter Ascaris suum cDNA 5' similar to TR:Q9V8V2 Q9V8V2 ELONGIN-C PROTEIN. ;. | 91 | 2e-07 | 40% (24/59) | 1 |