Detailed annotation info for ACL00002118;
Annotation NameSmall nuclear ribonucleoprotein homolog related cluster
Score335&emsp
E-value4e-31
% Sequence Identity80% (66/82)
Locus
EC Number
COG Function Transcription
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q8LAK5Small nuclear ribonucleoprotein homolog related cluster3354e-3180% (66/82)1GO:0005634|nucleus|IEA; GO:0005732|small nucleolar ribonucleoprotein complex|IEA; GO:0006397|mRNA processing|IEA; GO:0008248|pre-mRNA splicing factor activity|IEA; GO:0019013|viral nucleocapsid|IEA; GO:0030529|ribonucleoprotein complex|IEA
nrNP_179464small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative [Arabidopsis thaliana] pir||A84568 probable small nuclear ribonucleoprotein E [imported] - Arabidopsis thaliana gb|AAD08943.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana] gb|AAM64436.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana] dbj|BAC43399.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana] gb|AAO64082.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]3422e-3181% (67/82)1
cogSPBC11G11.06c[K] COG1958 Small nuclear ribonucleoprotein (snRNP) homolog2211e-1855% (43/77)1 Transcription
keggath:At2g18740MSF3.12; small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative3424e-3281% (67/82)1
smart00651smart00651, Sm, snRNP Sm proteins; small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing1655e-1433% (22/66)Sm1
pfamPF01423pfam01423, LSM, LSM domain1685e-1333% (22/65)LSM1
est_othersBJ167281BJ167281 full length cDNA library, chloronemata and young gametophores Physcomitrella patens subsp. patens cDNA clone pph14k06 3'.2004e-1857% (47/82)1