Detailed annotation info for ACL00001586;
Annotation NameU6 snRNA-associated Sm-like protein LSm5 related cluster
Score262&emsp
E-value1e-22
% Sequence Identity68% (50/73)
Locus
EC Number
COG Function Transcription
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q9Y4Y9U6 snRNA-associated Sm-like protein LSm5 related cluster2621e-2268% (50/73)4GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003723|RNA binding|IEA; GO:0003723|RNA binding|TAS; GO:0005634|nucleus|IEA; GO:0005634|nucleus|TAS; GO:0005732|small nucleolar ribonucleoprotein complex|IEA; GO:0006397|mRNA processing|IEA; GO:0006397|mRNA processing|TAS; GO:0008248|pre-mRNA splicing factor activity|IEA; GO:0030529|ribonucleoprotein complex|IEA
nrNP_506870u6 snRNA-associated Sm-like protein (5Q51+lsm-4) [Caenorhabditis elegans] pir||T21508 hypothetical protein F28F8.3 - Caenorhabditis elegans emb|CAB03013.1| Hypothetical protein F28F8.3 [Caenorhabditis elegans]2732e-2371% (51/71)1
cogSPBC20F10.09[K] COG1958 Small nuclear ribonucleoprotein (snRNP) homolog2282e-1960% (43/71)1 Transcription
keggcel:F28F8.3small nuclear ribonucleoprotein E (SNRNP-E) like2734e-2471% (51/71)1
smart00651smart00651, Sm, snRNP Sm proteins; small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing1881e-1636% (25/69)Sm1
pfamPF01423pfam01423, LSM, LSM domain1759e-1433% (23/69)LSM1
est_othersCD526159kw31c09.y1 Strongyloides ratti PA female naive pAMP1 v1 Strongyloides ratti cDNA 5' similar to TR:Q9Y4Y9 Q9Y4Y9 LSM5 PROTEIN. ;.1251e-0742% (29/68)1