Detailed annotation info for ACL00001419;
Annotation Name | Putative transformer serine/arginine-rich ribonucleoprotein related cluster | |||||||||
Score | 269&emsp![]() | |||||||||
E-value | 6e-23 | |||||||||
% Sequence Identity | 52% (54/103) | |||||||||
Locus | ||||||||||
EC Number | ||||||||||
COG Function | ||||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q84QA6 | Putative transformer serine/arginine-rich ribonucleoprotein related cluster | 269 | 6e-23 | 52% (54/103) | 2 | GO:0003723|RNA binding|IEA; GO:0019013|viral nucleocapsid|IEA; GO:0030529|ribonucleoprotein complex|IEA | |||
nr | XP_482149 | putative transformer-SR ribonucleoprotein [Oryza sativa (japonica cultivar-group)] dbj|BAD05420.1| putative transformer-SR ribonucleoprotein [Oryza sativa (japonica cultivar-group)] dbj|BAD05836.1| putative transformer-SR ribonucleoprotein [Oryza sativa (japonica cultivar-group)] | 280 | 7e-24 | 56% (54/95) | 1 | ||||
cog | SPAC25G10.01 | [R] COG0724 RNA-binding proteins (RRM domain) | 181 | 2e-13 | 40% (37/92) | 1 | General function prediction only | |||
kegg | ath:At1g07350 | F22G5.31; transformer serine/arginine-rich ribonucleoprotein, putative | 251 | 7e-21 | 51% (49/95) | 1 | ||||
smart | 00360 | smart00360, RRM, RNA recognition motif; | 184 | 8e-16 | 44% (33/74) | RRM | 1 | |||
smart2 | 00157 | smart00157, PRP, Major prion protein; The prion protein is a major component of scrapie-associated fibrils in Creutzfeldt-Jakob disease, kuru, Gerstmann-Straussler syndrome and bovine spongiform encephalopathy | 91 | 5e-05 | 38% (21/54) | PRP | 2 | |||
pfam | PF00076 | pfam00076, RRM_1, RNA recognition motif | 156 | 4e-11 | 42% (30/71) | RRM_1 | 1 | |||
pfam2 | PF07172 | pfam07172, GRP, Glycine rich protein family | 145 | 7e-10 | 43% (27/62) | GRP | 2 | |||
est_others | BU025509 | QHF9M03.yg.ab1 QH_EFGHJ sunflower RHA280 Helianthus annuus cDNA clone QHF9M03. | 515 | 6e-61 | 95% (105/110) | 1 |