Detailed annotation info for ACL00001018;
| Annotation Name | Putative pre-mRNA splicing factor related cluster | |||||||||
| Score | 172&emsp | |||||||||
| E-value | 9e-12 | |||||||||
| % Sequence Identity | 27% (60/219) | |||||||||
| Locus | ||||||||||
| EC Number | ||||||||||
| COG Function | ||||||||||
| KEGG Pathway | ||||||||||
| Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
| SSU | No hits found | 0 | ||||||||
| LSU | No hits found | 0 | ||||||||
| uniref90 | UniRef90_Q8W3F7 | Putative pre-mRNA splicing factor related cluster | 172 | 9e-12 | 27% (60/219) | 3 | GO:0005488|binding|IEA; GO:0005622|intracellular|IEA; GO:0006396|RNA processing|IEA | |||
| nr | NP_922169 | putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] gb|AAL58273.1| putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] gb|AAP54456.1| putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] | 172 | 2e-11 | 27% (60/219) | 4 | ||||
| cog | SPBC6B1.07 | [R] COG0457 FOG: TPR repeat | 149 | 1e-09 | 22% (54/235) | 1 | General function prediction only | |||
| kegg | dme:CG6841-PA | CG6841; CG6841 gene product | 172 | 8e-12 | 25% (64/249) | CG6841 | 1 | |||
| smart | 00386 | smart00386, HAT, HAT (Half-A-TPR) repeats; Present in several RNA-binding proteins | 102 | 2e-06 | 50% (16/32) | HAT | 1 | |||
| pfam | PF04484 | pfam04484, DUF566, Family of unknown function (DUF566) | 123 | 2e-07 | 21% (42/191) | DUF566 | 1 | |||
| pfam2 | PF05109 | pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1) | 116 | 1e-06 | 20% (45/218) | Herpes_BLLF1 | 2 | |||
| est_others | CK273448 | EST719526 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADB34 5' end. | 242 | 2e-23 | 43% (66/153) | 1 | ||||