Detailed annotation info for ACL00000611;
Annotation Name | Sm-like protein related cluster | |||||||||
Score | 232&emsp![]() | |||||||||
E-value | 4e-19 | |||||||||
% Sequence Identity | 54% (49/90) | |||||||||
Locus | ||||||||||
EC Number | ||||||||||
COG Function | Transcription | |||||||||
KEGG Pathway | ||||||||||
Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
SSU | No hits found | 0 | ||||||||
LSU | No hits found | 0 | ||||||||
uniref90 | UniRef90_Q9C6K5 | Sm-like protein related cluster | 232 | 4e-19 | 54% (49/90) | 1 | GO:0005634|nucleus|IEA; GO:0005732|small nucleolar ribonucleoprotein complex|IEA; GO:0006397|mRNA processing|IEA; GO:0008248|pre-mRNA splicing factor activity|IEA; GO:0030529|ribonucleoprotein complex|IEA | |||
nr | NP_177812 | small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative [Arabidopsis thaliana] pir||D96797 Sm-like protein [imported] - Arabidopsis thaliana gb|AAG51149.1| Sm-like protein [Arabidopsis thaliana] gb|AAM64339.1| Sm-like protein [Arabidopsis thaliana] | 232 | 9e-19 | 54% (49/90) | 1 | ||||
cog | SPBC9B6.05c | [K] COG1958 Small nuclear ribonucleoprotein (snRNP) homolog | 187 | 9e-15 | 42% (39/91) | 1 | Transcription | |||
kegg | ath:At1g76860 | F7O12.3; small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 232 | 2e-19 | 54% (49/90) | 1 | ||||
smart | 00651 | smart00651, Sm, snRNP Sm proteins; small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing | 168 | 3e-14 | 29% (23/79) | Sm | 1 | |||
pfam | PF01423 | pfam01423, LSM, LSM domain | 161 | 4e-12 | 34% (27/79) | LSM | 1 | |||
est_others | AL793596 | AL793596 XGC-neurula Xenopus tropicalis cDNA clone TNeu111m11 5'. | 238 | 3e-23 | 50% (51/102) | 1 |