Detailed annotation info for ACL00000251;
Annotation NameProbable small nuclear ribonucleoprotein F related cluster
Score344&emsp
E-value6e-32
% Sequence Identity72% (63/87)
Locus
EC Number
COG Function Transcription
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q9SUM2Probable small nuclear ribonucleoprotein F related cluster3446e-3272% (63/87)1GO:0000398|nuclear mRNA splicing, via spliceosome|IEA; GO:0003723|RNA binding|IEA; GO:0005634|nucleus|IEA; GO:0005732|small nucleolar ribonucleoprotein complex|IEA; GO:0006397|mRNA processing|IEA; GO:0008248|pre-mRNA splicing factor activity|IEA; GO:0030529|ribonucleoprotein complex|IEA
nrNP_194751small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative [Arabidopsis thaliana] sp|Q9SUM2|RUXF_ARATH Probable small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) pir||T14082 hypothetical protein F9N11.70 - Arabidopsis thaliana emb|CAB52466.1| snRNP Sm protein F-like [Arabidopsis thaliana] emb|CAB81015.1| snRNP Sm protein F-like [Arabidopsis thaliana] gb|AAM65157.1| snRNP Sm protein F-like [Arabidopsis thaliana] gb|AAP21190.1| At4g30220 [Arabidopsis thaliana]3441e-3172% (63/87)1
cogSPBC3E7.14[K] COG1958 Small nuclear ribonucleoprotein (snRNP) homolog2706e-2472% (51/70)1 Transcription
keggath:At4g30220F9N11.70; small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative3445e-3272% (63/87)1
smart00651smart00651, Sm, snRNP Sm proteins; small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing1783e-1541% (28/67)Sm1
pfamPF01423pfam01423, LSM, LSM domain1931e-1543% (28/64)LSM1
est_othersCN200605Tor10273 Gametophyte rehydration Library Tortula ruralis cDNA.1973e-1761% (42/68)1