LOCUS RICMTB1 2135 bp DNA circular PLN 19-DEC-1988 DEFINITION Oryza sativa (rice) Mitochondrial plasmid-like DNA (B1), complete sequence. ACCESSION D00293 NID g344018 KEYWORDS Cytoplasmic male-sterility; mitochondrial DNA; mitochondrial plasmid. SOURCE Cytoplasmic male-sterile rice line (A-58CMS), mitochondrial plasmid-like DNA (B1). ORGANISM Mitochondrion Oryza sativa Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Oryza. REFERENCE 1 (bases 1 to 2135) AUTHORS Shikanai,T., Yang,Z.-. and Yamada,Y. TITLE Properties of the circular plasmid-like DNA B1 from mitochondria of cytoplasmic male-sterile rice JOURNAL Plant Cell Physiol. 28, 1243-1251 (1987) COMMENT The complete nucleotide sequence of B1 (2,135bp) which is a plasmid-like minicircular DNA in the mitochondria of Oryza sativa A-58CMS was found to contain sequences homologous to those in the 1,913bp plasmid-like DNA of maize, and therefore, this sequence may have originated from the nuclear genome. The number 2014 described under the result section as the beginning of ORF seems to be wrong number. According to the sequence map, correct number should be 2019. FEATURES Location/Qualifiers source 1..2135 /organism="Oryza sativa" /mitochondrion CDS complement(1732..2019) /note="open reading frame; (comp strand)" /codon_start=1 /db_xref="PID:g344019" /translation="MGLAWCRGTKPRMIGTHITRFLKQPLALPGGCLAGVREDSEQPS NCGNWGTLCRHESDVIPDRNTGTKVFVKVFGIQQCWMSGTERSGTERVLGN" CDS 1793..2035 /note="open reading frame" /codon_start=1 /db_xref="PID:g344020" /translation="MPKTLTKTFVPVFLSGMTSLSCRHSVPQLPQLLGCSESSRTPAR HPPGNARGCFKKRVMWVPIILGLVPRHQANPIPFRW" BASE COUNT 545 a 494 c 449 g 647 t ORIGIN 3 bp downstream of EcoRI site. 1 ttcaggattg gctaaggctc tagccattaa atgtgactgg ggttgatcca agggctggtc 61 tcatggtttt gactaggtgt ttctcaaatt tctgatcata tttcctgtcg ttataacccc 121 caaaatacgc taactcgcag ctcgaagttc ccagttacat gggcaaccct actcactata 181 catagggtgt gaagagacgg acaacaatag tctttctctg ctttcactcg agccaaacta 241 agtgttttct aggattggcc ccaaagccat actatggtca caacggtaac cccctcgatt 301 tagtttatcc aatcaatcga gaggcagcat ctctatcaat tactcggatc ggcaacctcg 361 gttctggaat gtggacttca ctgaccagcc gcctcttagt ccacacccaa cttggaagtg 421 ttattgattc gttagtaacc ttcgccatcc taatacccga gactgtagtg ttctaagttg 481 gttaaagccg tcgtctcctg ggatgcccgg ctggtcgggc aagtattagt gaaacggctc 541 cgcgcaatca ataactaccc tgcttaggta tgagcttcca agtcccgaat ccttttgtct 601 caagtctgcc ttggtaatgt gaccacacat cctttgatga tggaagtgtt gtttcccaac 661 aatccacccc ggaatcctag ttggagtaat gtatccctac atactatcgc gctaatgtaa 721 tcgggttctc agatcatact caatgagggg tggctagtat cccgaaactt tgaagaacat 781 gagttaagta gttcattcac ttggtttcgc caccagtcaa aacgccctaa aacccagtag 841 gttttctcga tcaccattct acgattttat ttccacctgt tttagaacac ataaattgtg 901 ctacccttaa gagtttatca ctaaaatcaa gaactttatt tatgacctgt aagttgcctc 961 ataaaaagta gatgttagta cccgactaaa aggagggaat caaataaaag gtaaagctct 1021 caattaaaat aaaaagctat cgtttacttt gttaagggta tattgcccgt agcgaggtta 1081 aggtaaaccc ttgaccgagt gaaggcgagc ccggtaaagc actaagtgta ttggctagct 1141 tgtactttat tagctatcaa gtgtttgatg taccaattac tttattgtgt caactagttt 1201 attgaatgca aaggtaattc cctcgataat tgatttaatt atcaagaaag agaattagtt 1261 accctccttc cctcgagctg agctatttct tgtgtattca atcgtatgca cgagggctgt 1321 cctctcctct gctctatctc ccggacaggt atgaaagtcg taattctttg ggtttttgta 1381 gtcaatggaa tgagcggagg gagacacatc cttccatcca aaggtgtgtg tgtcccgtag 1441 cgagtggaat ggctggttcg gtctagtcgt atagaacggg ttgagttctt tttactgagt 1501 cctttcgagg ctggaagtgt ttcttacagt ttccttttcc gaagggaaag tcaagtagta 1561 taaactagta ctaagtccaa gaagaagggg tgaaaagtga ggagggcgat tagcccgatc 1621 cacttgaggg gaggaaggcc ttccttccct actaatagta ccaattcata attcctattc 1681 gtaataaatt catatttatt tggaaaaata tgaaaactaa ttatctttat tctagttccc 1741 taaaaccctt tccgtgccac tcctttctgt tccactcatc caacattgtt ggatgccaaa 1801 gactttgacg aagactttcg tacctgtatt tctgtccggt atgacgtcgc tttcgtgtcg 1861 gcatagcgtg ccccagttgc cacagttgct aggctgttca gagtcctctc ggaccccggc 1921 taggcatcct cccggtaatg ccaggggctg cttcaagaaa cgggtgatgt gggttccaat 1981 cattcttggt ttggttcctc ggcaccaagc caatcccatt cctttccgct ggtgaccgcc 2041 ttcttgttgc ctaccttttt aacccctgta gtaaccccaa gtccaagtac aaggcatacg 2101 tgctccttta atatgcttgc tcctcttttc ttgaa //