LOCUS PRE251941 5966 bp DNA 02-MAY-2000 DEFINITION Plasmodium reichenowi complete mitochondrial genome. ACCESSION AJ251941 NID g7688280 VERSION AJ251941.1 GI:7688280 KEYWORDS coxI gene; coxIII gene; cytb gene; cytochrome b; cytochrome oxidase I; cytochrome oxidase III. SOURCE Plasmodium reichenowi. ORGANISM Mitochondrion Plasmodium reichenowi Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5966) AUTHORS Conway,D.J., Fanello,C., Lloyd,J., Al-Joubori,B.M.A., Baloch,A.H., Somanath,S.D. and Thomas,A.W. TITLE Origin and spread of Plasmodium falciparum malaria is traced by mitochondrial DNA JOURNAL Unpublished REFERENCE 2 (bases 1 to 5966) AUTHORS Conway,D.J. TITLE Direct Submission JOURNAL Submitted (17-DEC-1999) Conway D.J., Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, Keppel St., London, WC1E 7HT, UNITED KINGDOM FEATURES Location/Qualifiers source 1..5966 /organism="Plasmodium reichenowi" /organelle="mitochondrion" /db_xref="taxon:5854" gene complement(734..1573) /gene="coxIII" CDS complement(734..>1573) /gene="coxIII" /function="putative mitochondrial electron transport" /codon_start=1 /transl_table=4 /product="putative cytochrome oxidase III" /protein_id="CAB89848.1" /db_xref="PID:g7688281" /db_xref="GI:7688281" /translation="SSIYTITCYPRRTFLPLYVYGTLSHRSYKFILFSNLSNIKAHIV SYPALTSLYGTSLKYFSVGILFTFNPIILLIFVYSIRESFYSVFSSLTSGMLSIIISE ALLFFTYFWGILHFSLSPYPLCNEGIVITSSRMLILTITFILASASCMTACLQVFLEK GMSFEISSIVCIIYLLGECFASLQTTEYLHLSYHINDNVYTTLFYCVTGLHFSHVIVG LLLLLIYFIRIIEVYDINTEWFCNSFGISYIVIPHTDQITILYWHFVEIVWLFIEFLF YSE" gene 1933..3471 /gene="coxI" CDS <1933..3471 /gene="coxI" /function="putative mitochondrial electron transport" /codon_start=1 /transl_table=4 /product="putative cytochrome oxidase I" /protein_id="CAB89849.1" /db_xref="PID:g7688282" /db_xref="GI:7688282" /translation="RLTWMDNTRLFQSITAVAGTVWIKYFSFISEPHVIFIVLNRYSL ITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRVIAQENVNLYNMIFTIH GIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAE FGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGL TLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHL FWFFGHPEVYILILPAFGVISHVISTNYCRNLFGNQSMILAMGCIAVLGSLVWVHHMY TTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTF GGTTGVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNLFGKNLREN SIIILWSMLFFVGVILTFLPMHFLGFNVMPRRIPDYPDALNGWNMICSIGSTMTLFGL LIFK" gene 3492..4622 /gene="cytb" CDS <3492..4622 /gene="cytb" /function="mitochondrial electron transport" /codon_start=1 /transl_table=4 /product="cytochrome b" /protein_id="CAB89850.1" /db_xref="PID:g7688283" /db_xref="GI:7688283" /translation="MNFYSINLVKAHLINYPCPLNINFLWNYGFLLGIIFFIQIITGV FLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYM YLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLLSSIPVAVIWICGGYT VSDPTIKRFFVLHFILPFIGLCIVFIHIFFLHLHGSTNPLGYDTALKIPFYPNLLSLD VKGFNNVIILFLIQSLFGIIPLSHPDNAIVVNTYVTPSQIVPEWYFLPFYAMLKTVPS KPAGLVIVLLSLQLLFLLAEQRSLTTIIQFKMIFGARDYSVPIIWFMCAFYALLWIGC QLPQDIFILYGRLFIVLFFCSGLFVLVHYKRTHYDYSSQANI" BASE COUNT 1942 a 938 c 953 g 2133 t ORIGIN 1 aagcttttgg tatctcgtaa tgtagaacaa tattgagttg accgtcaaat ccttttcatt 61 aaaagagtgg atttaatgcc cagccaacac catccaattt gattgggaat tatctgtgtt 121 acaaattttt gatcccaggc tggtaacaaa tgtaaacttt tagcccataa gaatagaaac 181 agatgccagg ccaataactc aaacagagct atgacgctat caatttttag caagacggat 241 aaatttttca tagaacttaa cgtatcatca tccatgcaaa gataaaacgg tagataggga 301 acaaactgcc tcaagacgtt cttaacccag ctcacgcatc gcttctaacg gtgaactctc 361 attccaatgg aaccttgttc aagttcaaat agattggtaa ggtgtagtgt ttactatcaa 421 atgaaacaat gtgttccacc gctagtgttt gcttctaaca ttccacttgc ttataactgt 481 atggacgtaa cctccaggca aagaaaatga ccggtcaaaa cggaatcaat taactatgga 541 tagctgatac tatcaattta tcattactca agtcagcata gtatatatga aggtttctat 601 ggaaacacac ttcccttctc gccatttgat agcggttaac ctttcctttt ccttacgtac 661 tctagctatg aacacaattg tataatcgta caattattca tatatatatt tgaaacagga 721 catatctgtt cgtttattct gaatagaata agaactctat aaataaccag actatttcaa 781 caaaatgcca atataaaatt gtaatttgat cagtatgagg tataacaata tatgatatac 841 cgaaagaatt acaaaaccat tcggtattaa tatcatatac ttcgattatt cttataaagt 901 atattaataa taataataaa cctactatta catgagaaaa atgcaatcct gtaacacaat 961 agaataatgt agtatataca ttatcattta tatggtatga taagtgtaaa tactctgtag 1021 tttgtaaaga tgcaaaacat tctcctaata agtatattat acaaacaata ctagaaattt 1081 caaaactcat tcctttttct aaaaatactt gtaagcatgc agtcatacat gatgcactag 1141 ctaatataaa tgtaattgtt aagattaaca ttcttgatga agtgataaca ataccttcat 1201 tacataatgg gtatggtgat agactaaaat gcaatatacc ccaaaaatat gtaaagaata 1261 ataaagcttc tgagattata atagataaca tacctgaagt taaagatgaa aatacagaat 1321 aaaaactttc tcgaatagaa taaacaaata ttaataagat tatagggtta aatgtaaata 1381 atatacctac agaaaaatat tttaaagatg taccatataa tgatgttaat gcaggatagg 1441 aaacaatatg tgcttttata tttgataaat tactaaataa aataaattta taagaacggt 1501 gagagagtgt gccgtaaaca tataacggta agaaggttcg ccggggataa caggttatag 1561 tatatataga gctctaatct ttatatacta ttggcacctc catgtcgtct catcgcagcc 1621 ttgcaataaa gaatatttag cgtgtattgt tgccttgtac acaccgctcg tcacgcaata 1681 tttttatatt gagaatagaa ctccaggcgt taacctgtag agttgagatg gaaacagccg 1741 gaaaggtaat tttacgccct taacgtaaag attatttatg aaatagatta gcatgggact 1801 aaaaaatgtt atgttgttgg tttaagccct attaccatac aagagatcgc gtactttgga 1861 ccgaataaag ctgtgaggaa actacattaa aggaactcga ctggcctaca ctataagaac 1921 gaacgctttt aacgcctgac atggatggat aatactcgac tcttccaaag tataaccgct 1981 gtcgctggga ctgtatggat caaatatttc tcatttatat ccgagcctca tgttattttt 2041 attgttttaa atagatattc acttattaca aattgtaacc ataaaacttt aggattatac 2101 tatttatggt tttcattctt atttggtagc tatggatttt tattatcagt aatactacgt 2161 acagaattat attcttcatc tttaagagta atagctcaag aaaatgtaaa tctatataat 2221 atgatattta caatacacgg aataataatg atttttttca atataatgcc aggattattc 2281 ggaggatttg gtaattactt tttacccatt ttatgtggat ctccagaatt agcatatcct 2341 agaattaata gtatatcttt actgttacaa ccaattgctt ttgttttagt tatattatct 2401 actgcagcag aatttggtgg tggaactgga tggactttat atccaccatt aagtacatct 2461 ttaatgtcat tatctcctgt agctgtagat gtaataattt ttggtttatt agtatcagga 2521 gtagctagta ttatgtcttc attaaatttt attactacag taatgcattt aagggcaaaa 2581 ggtttaacac ttggtatatt aagtgtttca acatggtcat taatcattac atcaggtatg 2641 ttactactaa cattaccagt tttaactgga ggagtattaa tgttattatc agacttacac 2701 tttaatactt tattttttga cccaacattt gcaggagatc caatattata tcaacattta 2761 ttctggtttt ttggtcatcc tgaagtatat attttaatat tacctgcttt tggagtaatt 2821 agtcatgtaa tttctactaa ttactgtaga aatctatttg gtaatcaatc tatgatactt 2881 gctatgggat gtatagctgt tttaggaagc ttagtatggg tacatcatat gtacactaca 2941 ggtttagaag ttgatactag agcttatttt acttctacta ccatattaat atcaatacct 3001 actggtacaa aagtatttaa ctggatatgt acatatatga gtagtaattt tggtatgata 3061 catagctctt ccttattgtc attattattt atatgtacat ttacatttgg gggtactact 3121 ggggttatct taggtaatgc tgctattgat gtagcattac atgacacata ttatgttatt 3181 gctcatttcc attttgtact atcaatcggt gcaattatcg gattatttac aactgtaagt 3241 gcatttcaag ataatctctt tggtaaaaat ttacgagaaa attctatcat aatactatgg 3301 tcaatgctat tttttgtagg tgtaatatta acatttttac ctatgcattt tttaggattt 3361 aatgtaatgc ctagacgtat tcctgattat ccagacgctt taaatggatg gaatatgatt 3421 tgttctattg ggtcaacaat gactttattt ggtttactaa tttttaaata atattactat 3481 ttattgtttt aatgaacttt tactctatta atttagttaa agcacactta ataaattacc 3541 catgtccatt gaacataaac tttttatgga attatggatt cctattagga atcatatttt 3601 ttattcaaat tataactggt gtatttttag caagtcgata tacaccagat gtatcatatg 3661 catattatag tatacaacac attttaagag aattatggag tggatggtgt tttagatata 3721 tgcatgcaac aggtgcttct cttgtatttt tattaacata tttgcatatt ttaagaggat 3781 taaattattc atatatgtat ttaccattat catggatatc cggattgatt ttatttatga 3841 tattcattgt tactgctttc gttggttatg ttttaccatg gggtcaaatg agttattggg 3901 gtgcaacagt aattactaac ttattatcct ctattccagt agcagttatt tggatatgtg 3961 gaggatatac tgtgagtgat cctacaataa aacgattttt tgttttacat tttatattac 4021 catttattgg attatgtatt gtatttatac atatattttt cttacattta catggtagca 4081 caaatccttt agggtatgat acagcattaa aaataccctt ttatccaaat ctattaagtc 4141 ttgatgttaa aggatttaat aatgtaatca ttttatttct aatacaaagt ttatttggaa 4201 ttataccttt atcacatcct gataatgcta ttgtagtaaa tacatatgtt actccatctc 4261 aaatagtacc tgaatggtac tttctaccat tttatgcaat gttaaaaact gttccaagta 4321 aaccagctgg tttagtaatt gtattattat cattacaatt attattctta ttagccgaac 4381 aaagaagttt aacaactata attcaattta aaatgatttt tggtgctaga gattattctg 4441 ttcctattat atggtttatg tgtgcattct atgctttatt atggattgga tgtcaattac 4501 cacaagatat tttcatttta tatggtcgat tatttattgt attatttttc tgtagtggtt 4561 tatttgtact tgttcattat aaacgaacac attatgatta cagctcccaa gcaaacatat 4621 aatattacaa gattgtgata agatgacatt tctgagtatt gagcggaaca aagcagaccg 4681 taaggttata attatgtact atgattggaa aatataatta tagttaccat agctgtagat 4741 ggatgcttcg atatatagta tattacagta tcaatcggat ttacatgctc agccgccaaa 4801 aactataacg atattattac cgtacaagcc gttagcaaga catgataggg agttggcaag 4861 ttaaagaagt tctggtttat aatagatacg ttattaatgt taggatgtat gggatatttg 4921 tagtacacct tgattggttt tactattttt atttatcgat aaatgttcgg tattgcatgc 4981 ctggtgtttt taatatagac gctgacttcc tggctaaact tcccaatgat atatcttcca 5041 aatagatttc gcagaaaacc gtctatattc atgtttgatt gacctttaac cactaattac 5101 gaatcttcca agaatatttt aagagtccaa ggttcggtct atcattttcc ggttcggtaa 5161 taagatcaca tgttttatag ttcatggaga catggctata accactattc atagagacaa 5221 ctaatggaat ctctctcgat ttccagatgt tgagttacta agaggattct ctccacactt 5281 caattcgtac ttccactacc agaatatact ctcctgttct aaaattctag gatttttcgc 5341 gttttttcag gagaaatccg tatatcgatg tctttaaatc aatgctattg gattcaacgt 5401 ccaggacttc ctgacgctta ataacgattt ctacttccag cagccattta ggttcagcta 5461 caagttcact gtcaactacc atgttacgac ttcgcaccga ctgtttcttt tacctcacga 5521 gtcgatcagg aaggtttcat ccttaaatct cgtaaccatg ccaacacata agaactttta 5581 gggaagttaa ggtgctcagg gtcttaccgt cgggccgtat gattccacat attcatggat 5641 aattctattt attaggagtc tcacactagc gacaatgggg aagtcgttac accgttcatg 5701 caggacggag attacccgac aaggaatttt gctaccttag gaccgtttaa aatacagccg 5761 ccgtttatca ttgatgccgg gcagatgtca gtaacttgaa atattcatca gaattatcag 5821 tgacttgtgt tgtaacctta cagacgcttc cagtaatcta acttcttata aatggaagcg 5881 ccggtttccc gggtatccaa tccagtgctc cattcaaggc atagagactc agcctatgtt 5941 caactttgta gagttatatt ataata //