LOCUS NCMIDRPM 7052 bp DNA linear PLN 18-APR-2005 DEFINITION N. crassa mitochondrial linear plasmid (maranhar) DNA for putative RNA and DNA polymerase. ACCESSION X55361 S48690 VERSION X55361.1 GI:3023 KEYWORDS DNA polymerase; RNA polymerase. SOURCE mitochondrion Neurospora crassa ORGANISM Neurospora crassa Eukaryota; Fungi; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora. REFERENCE 1 (bases 1 to 7052) AUTHORS Court,D.A. and Bertrand,H. TITLE A method for sequencing uncloned termini of linear plasmids JOURNAL Nucleic Acids Res. 19 (7), 1714 (1991) PUBMED 2027782 REFERENCE 2 (bases 1 to 7052) AUTHORS Court,D.A. and Bertrand,H. TITLE Genetic organization and structural features of maranhar, a senescence-inducing linear mitochondrial plasmid of Neurospora crassa JOURNAL Curr. Genet. 22 (5), 385-397 (1992) PUBMED 1423726 REFERENCE 3 (bases 1 to 7052) AUTHORS Betrand,H. TITLE Direct Submission JOURNAL Submitted (08-NOV-1990) Betrand H., University of Guelph, Dept of Microbiology, Guelph Ontario, N1G 2W1 Candad COMMENT On Jun 9, 2005 this sequence version replaced gi:259486. May encode a DNA & RNA polymerase similar to phage polymerases. FEATURES Location/Qualifiers source 1..7052 /organism="Neurospora crassa" /organelle="mitochondrion" /mol_type="genomic DNA" /strain="Aarey-1e" /isolate="fungal genetic stock centre number 2499" /db_xref="taxon:5141" /plasmid="Mitochondrial plasmid" repeat_region 1..349 /rpt_type=INVERTED /rpt_type=TERMINAL gene 291..2981 /gene="ORF1" CDS 291..2981 /gene="ORF1" /codon_start=1 /transl_table=4 /product="putative RNA polymerase" /protein_id="CAA39045.1" /db_xref="GI:1449393" /db_xref="GOA:P33540" /db_xref="HSSP:1ARO" /db_xref="UniProt/Swiss-Prot:P33540" /translation="MIKFYFTTFHMKFPARLFSTSFTLNNTNIINEKDVKYITKNFLL ENSNGFNLIKNIINSDETSEVKQNKIEVELNNIWHTEITDILQKKRSLGLDAIGSSIL AKDFHNLIGDIENFINKGRTNKLPGVEYLKPSLIISIVLGKVIPFSLRHSDIFNQPTH SLFAEIGKILKYQSIFELHHRIGLIQNRVEEIKNYTEKKLVSEFNKLTKVLDEYKNTL KNLEELSGESIIKVGLGFTALLSETSEFYSLEEQIIAKNKSIRYIIPKNKLKTLINNI TLMDTIELPMIIPPLEWKIDDNEKIIEYGGTILNNKHRIRPLRTKSVENSDANDMTYN KELVDAVNFKSKIPYTINLKLLDFITRDEFINRDKKDNVIIYKHIHPDSALLGEYMKD RKNPKISEITTHNSKFLYHSSIISIAKLMKDVKEFYMTVFIDWRGRFYTSSCALNIQG GELARSLLLFKEGQKLNDIGLKALKIYTANAFGLDKRSKEERLDWVEQNLHKIIDIDN YEIWREADEPLLFLACALELKGYNEDPNFISHLPILMDATCNGLQHLSAMVNDFVLAE KVNLLKSTENDNPRDLYSEVIPHIKQEILEASKSYEHTNLERINVERCLVKRGLMTIT YGATERGIYDQIVSKFFQKDEWNKTVGLHFVCIDSDIAPKDVVFTQKNILLLSKIIYN SLFKIHPNLNTLMVYFNSIVKVLCELDLPVNWVTPYGLVIQQKYNKFTKYNETTYVAS KRYKLVLRKADTTSISKQKQIQAFIPNFVHSMDGSNIVLLINTIRDEGRKINFASIHD CFATHANDTAWLSWYVKQSFIRIYSDSSFLRRFHNYIQLRIQAKYGEDAHFDKDGVLT HVTIDNGTDIPDRIDIPKPLVVNKDNKIYKEILHSEYFIN" gene complement(3697..6762) /gene="ORF2" CDS complement(3697..6762) /gene="ORF2" /codon_start=1 /transl_table=4 /product="putative DNA polymerase" /protein_id="CAA39046.1" /db_xref="GI:578156" /db_xref="GOA:P33537" /db_xref="InterPro:IPR004868" /db_xref="InterPro:IPR006172" /db_xref="UniProt/Swiss-Prot:P33537" /translation="MIKFYFTTFHMKFPARLFSTSGNRANFEENSSNEVQNQIKYLKD FKKENPKFNWESTTEPKHMILSNIGEYEKNDFNLKSLLNINEFNINVELLRQLFMKLD KNFTYALGVILRNVDSNTNISVDRHFLVNFNTDPVIILQQIYDRIIFLSEKYYLVPVD KLFIKLRKLNFKVKNPVFHPIAKEKTNIHTTIPKGKSKLSRAEFVPHTMDLKFYGVET KHDKEKNIRIFDNGKVILKVKIIKDGVYHLIDVISRDNRLLYQFEDVKHGDGLKRYWI NDNMYYYYYDNTLVNVETPQKVGNIEPAKRDKTQDKKILAFDIETFQVPTGNGDSTMI AYACGFYDGKKSLTYYISDFISQREMLLACIKDMLKYDKHTVYCHNFSKFDINFIIKI LVQEFVVEKIISKDLDILSIKISYKFEPKKKGGKAERHTITIADSCRLLPGSLDKLAK DHNIITKKGKFPYKFVNKDNLEYVGLLPDYEYYIDPKKGEMITLFEWAAMYTNKWSMR KETIIYLEKDIKALYQLMMEMSNNTYSTFRINITRVKTASALAFLVYRTIFLPNEVEE ENETNSPNNILSLFDKKEEKKLTPKYFLPKLKGRLERAVRAAYFGGRNEIFIPIINNI FSFDFNSLYPTAMMMPMPVGIPVHTFCKNLNEIFGFVRAKIITPAINIPVLPCRVKVN GVQKLIFPIGEWTGWYFSEELKLAVEYGYKIEVLESYVFEKRDDPFKEYIEHFASIKD NTKGSKKQMAKLLLNTLYGRTGMNDSAAEIKMLTTNELDNIQLTNNVIHEFEVDDDKH YVRYDKKPCPVLCAQSEKNYELLSYLDGEKDDGFIINSTSIAAATASWSRILMYKHII NSAYTDTDSIFVEKPLDSAFIGEGCGKFKAEYNGQLIKRAIFISGKLYLLDFGGKLEI KCKGITKNKDNTTHNLDINDFEALYNGESRVLFQERWGRSLELGTVTVKYQKYNLISG YDKREKLYSLGKWVNTSPLCINENFEVISKALVSDVGESWYRKRIHYNK" repeat_region complement(6704..7052) /rpt_type=INVERTED /rpt_type=TERMINAL ORIGIN 1 ggggggatcg ggtaaagccc ttctttttaa tatgaacatc ccccttatag aggaaatagc 61 ctatataaca ctatgagtga tcattagatc agtctatagt gttttactat ttcctcaatg 121 tataacatgc gttttacctt tcccgcttat gcggctcttg acagagttgg ggcagatcca 181 aagactacag tacgcacatc tccagacaga tccgggagcg aagcctacta ttacctgtca 241 agaggagagc tgaaaaatag taggaatcgg ggtcacagaa tattttttta atgattaaat 301 tttattttac cacatttcac atgaaatttc ctgcacgttt attttccact tcattcacat 361 tgaataatac gaatataata aatgaaaaag atgttaaata tattactaaa aacttcttat 421 tagaaaattc aaatggtttt aatttaatta aaaatataat taattctgat gaaacatctg 481 aagttaaaca aaataaaatt gaagttgaat taaataatat ttggcatact gaaataactg 541 acattttaca gaaaaaaaga agcttagggt tggatgcaat aggaagttct attttagcta 601 aagattttca taatttaata ggagatatag agaattttat taataaagga agaacaaata 661 agttaccagg cgttgaatac ttgaaaccat cattaattat ttctattgtc ttaggaaaag 721 ttattccttt cagtcttaga cattcagata tttttaacca acctactcat tctttatttg 781 cagaaatagg aaaaatatta aaatatcaat ctatttttga attacatcat agaattggtc 841 ttattcaaaa tcgtgttgaa gaaattaaaa attatactga aaaaaaatta gtatctgaat 901 ttaataaatt aaccaaagta ctagatgaat ataaaaacac tttaaaaaac ttagaagaat 961 taagcgggga aagtattata aaagtaggat taggatttac agcactttta agtgaaacta 1021 gtgaatttta ctctctcgaa gaacaaatta tagctaaaaa taaatcaata agatatataa 1081 tacctaaaaa taaattaaaa acattaatta ataatataac attaatggat acaattgaac 1141 tcccaatgat tataccacca cttgaatgaa aaattgatga taatgagaaa attattgaat 1201 atggtggaac tatacttaat aataaacaca ggattagacc attaagaaca aaatcagtag 1261 agaattcaga tgcaaatgat atgacatata ataaagagtt agttgatgcc gttaacttta 1321 aatcaaaaat accatatact attaatttaa aacttttaga ttttattact agagatgaat 1381 ttattaatcg tgataaaaaa gataatgtta ttatttataa acatattcat cctgactcgg 1441 ctttattggg tgagtatatg aaggatcgta aaaacccaaa gattagtgaa ataacgactc 1501 ataatagtaa atttctttat cattcttcta taatttcaat agcaaaatta atgaaagatg 1561 ttaaggagtt ctatatgacg gtatttatag attgaagagg aagattttat acttcaagct 1621 gtgcgcttaa catacaaggt ggggaattgg ctagaagttt acttctattt aaagaaggac 1681 agaaattaaa tgatattgga ttaaaagctt taaaaatata tactgcaaat gctttcggtc 1741 ttgataaaag atctaaagaa gaaagattgg attgagtcga acaaaatttg cataaaatta 1801 ttgatataga caattatgaa atatgaagag aagctgatga accattacta tttttagcct 1861 gtgccttgga gttgaaaggg tataatgagg accccaattt tatttcacat ttaccaattc 1921 ttatggatgc aacatgtaat ggattacaac atttaagtgc aatggtaaat gattttgttt 1981 tagcagaaaa agttaattta cttaagagta ctgaaaatga taatcctagg gatttatatt 2041 ctgaagtaat tcctcatata aaacaagaaa ttttagaagc atcaaaatcg tacgaacaca 2101 caaaccttga gcgtataaat gtagagagat gtctagttaa aaggggactt atgactatta 2161 catatggagc aactgaaaga ggaatttatg atcaaattgt atctaaattc tttcaaaaag 2221 atgaatgaaa caaaactgta gggcttcatt ttgtatgtat agattcggat attgctccaa 2281 aagatgttgt atttactcaa aagaatatac ttcttttgag taaaattatt tataattctt 2341 tatttaaaat tcatcctaat ttaaatactc taatggtata ttttaatagt atagttaaag 2401 tattatgtga attagattta cctgttaatt gagtaactcc ttatggttta gtaatacaac 2461 aaaaatataa taaatttact aaatataatg aaacaactta tgttgcatct aaacgatata 2521 aattagtatt aagaaaagca gatactactt ctatttctaa gcagaaacaa atacaagcgt 2581 ttatacccaa ttttgttcac tcaatggatg gaagtaatat tgttttatta ataaatacaa 2641 taagagatga aggacgcaaa attaactttg caagtattca tgattgtttt gcaactcatg 2701 caaatgatac tgcatgacta tcatgatatg taaagcaaag ttttatacgt atttattctg 2761 attctagttt tttaagaaga tttcataatt atatccaatt aagaatccaa gctaaatatg 2821 gagaagatgc tcattttgat aaagatggtg tattaaccca tgtaactatt gataatggta 2881 cagatattcc tgatcgtatt gatataccta aacctcttgt agtaaataaa gataataaaa 2941 tatataaaga aattcttcat tctgagtatt ttattaacta aatgataaat aatgattgta 3001 aataatataa atatagtggg atttaacaaa aagggacaac acaaatagtg tatacccttt 3061 tttaaaggga atacacaaat ttgtgtattc cctttttttt tttaaattat tatacggtta 3121 agtaaataca catgtaataa caaagtaatg tttgtttatg ataggtagta cgtgcattgc 3181 acccatgatc tacttcctct caaaatctta tattctactg aaggttaaat catagaaaaa 3241 tacctatatt taatactgtt aagtatataa tttataatta taatatttaa tattaaataa 3301 accaaaatta cacctgtcca gctcgtgaca agtactgtaa cgagataggt aaaaccctcg 3361 aagggagaaa aataaaaaaa aagggaatgc aaaacctgca ttcccataaa aaaaaatagg 3421 aatacacaat tcttttgtgt attccatttt tttttctttt ttaaaggttt acacaaatac 3481 tgtgtatacc ttttttttaa agtatacaca aatactgtgt ataccttata gcgaaaagta 3541 ttaatcaagg ttaaccaaat aacatttata atatattaaa ctaaataaca atcattacct 3601 catattgtaa ataatggtgt gaggaaaata aaatgtaata ttagttgtta tactttagaa 3661 tacttttaga taatcatata gacgcctggg ggggctctat ttattataat gtattctttt 3721 tctatatcaa ctttcaccca catctgatac caaggctttt gaaattacct caaaattttc 3781 gtttatacat aatggtgaag tattaactca tttacctaaa gagtatagtt tttcacgttt 3841 atcatatccc gatataagat tatatttttg atatttaact gtaactgttc ctaattccaa 3901 gctacgtcct catctttctt gaaatagtac cctactttct ccattataca gtgcttcgaa 3961 atcattaata tctagattat gtgtggtatt atctttgttt ttagttattc ctttacattt 4021 aatttctaat ttaccaccaa aatctaatag atataatttt cctgatatga aaattgcacg 4081 tttaattaat tgtccgttat attcagcttt aaatttccca catccttctc caataaaagc 4141 actatctaat ggtttttcca caaatattga atcagtatca gtatatgctg aattaattat 4201 atgtttatac atcagaattc tagatcatga tgctgttgct gcagcaatgg atgtagagtt 4261 tatgataaat ccatcatctt tctctccatc taggtaagat aaaagttcgt aatttttttc 4321 tgattgtgca cacaatacag gacatggttt tttatcgtat ctcacgtaat gtttatcatc 4381 atctacttca aattcgtgaa taacgttatt agttaattga atattatcta attcattagt 4441 agttagcatt ttaatttcag cggcgctatc attcatacct gttcgaccat ataaagtgtt 4501 caaaagcaat ttagccatct gtttctttga acctttagta ttatctttaa ttgaggcaaa 4561 atgctcaata tattccttaa aaggatcatc tcttttttcg aaaacgtaac tctcaagtac 4621 ttctatttta tatccgtact caactgctaa ttttaattct tcagaaaaat atcaccctgt 4681 tcattcacca atgggaaaaa ttaatttttg tactccattg actttaactc tgcaaggtaa 4741 tactggaata tttattgctg gagtaataat ttttgctctt acaaatccaa atatttcatt 4801 taagttttta caaaaagtat ggactggtat accaacaggc attggcatca tcatggcagt 4861 agggtaaaga ctattaaaat caaatgagaa aatattattt ataattggaa taaaaatttc 4921 attacgtcca ccgaaataag cagctctaac ggctctttca agtcttcctt ttagtttagg 4981 taaaaaatat ttaggagtta attttttctc ctcttttttg tcaaacaatg ataaaatgtt 5041 attaggtgaa ttagtttcat tttcttcttc tacttcattt ggtaaaaata tcgttctata 5101 aactaagaag gccaatgcag atgcggtttt aactctagta atatttattc taaaagttga 5161 atatgtatta ttactcattt ccatcattaa ttgatataaa gcctttatat ctttttctaa 5221 atagataatg gtttcttttc tcatcgatca tttattagta tacatagcag ctcactcaaa 5281 tagtgtaatc atttcacctt ttttgggatc aatataatac tcataatcag gtaataatcc 5341 aacatattct aaattatctt tattaacaaa tttgtaagga aattttcctt ttttagtaat 5401 gatattatga tctttagcta atttatctag agatcccggt aggagtctac atgaatcggc 5461 aattgttata gtatgccgct cagcttttcc tccttttttt ttaggttcaa atttatatga 5521 aatttttatt gaaagaatat caagatcttt agatattatt ttttctacaa caaattcttg 5581 aactaatatt ttgataataa aattaatatc aaatttggaa aaattatggc aatatactgt 5641 atgtttgtca tattttaaca tatcttttat acatgctagt aacatttcac gttgagaaat 5701 aaaatcagaa atgtaataag taagagattt ttttccatca taaaatccac aagcataagc 5761 aatcatcgtt gaatcaccat tcccagtagg aacttgaaat gtttcaatat caaatgctaa 5821 tattttttta tcttgtgttt tatctctttt cgctggctct atattaccaa ctttttgagg 5881 tgtttcaaca ttgactaaag tattatcata gtaataataa tacatattat cattaattca 5941 atatctttta agaccatcac catgcttaac atcttcaaac tggtacaata atctattatc 6001 acgtgaaata acatctataa gatgatatac accatctttg ataattttca ctttaagaat 6061 aacttttcca ttatcaaaaa tacgaatgtt tttttcttta tcatgttttg tttcaacacc 6121 ataaaattta agatccattg tgtgtggaac aaattctgct ctagaaagtt tagactttcc 6181 tttaggaata gtagtgtgta tattagtttt ttcttttgct ataggatgaa aaactggatt 6241 tttaacttta aaattaagct ttcttaattt tataaaaagt ttatcaactg gcactaaata 6301 gtatttttca gaaagaaaaa taattctatc ataaatttgt tgtaagatta taactggatc 6361 agtattaaaa ttgactaaaa agtgtctgtc tactgatata ttagtattac tatcaacatt 6421 tctaagtata accccaagtg cgtatgtaaa atttttatct aatttcatga atagttgacg 6481 tagtaattca acattaatat tgaattcatt aatatttaaa agtgatttta aattaaaatc 6541 atttttttca tattcaccaa tgttacttaa aatcatatgt ttaggttcgg tagtactttc 6601 tcaattaaat ttagggtttt ctttcttaaa atctttcaaa tatttaattt gattttgtac 6661 ttcatttgaa gaattttctt caaaattggc tcgatttcca ctcgtggaaa ataaacgtgc 6721 aggaaatttc atgtgaaatg tggtaaaata aaatttaatc attaaaaaaa tattctgtga 6781 ccccgattcc tactattttt cagctctcct cttgacaggt aatagtaggc ttcgctcccg 6841 gatctgtctg gagatgtgcg tactgtagtc tttggatctg ccccaactct gtcaagagcc 6901 gcataagcgg gaaaggtaaa acgcatgtta tacattgagg aaatagtaaa acactataga 6961 ctgatctaat gatcactcat agtgttatat aggctatttc ctctataagg gggatgttca 7021 tattaaaaag aagggcttta cccgatcccc cc // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Feb 9 2005 14:31:10