LOCUS MITPCOCB 5895 bp DNA INV 30-MAR-1994 DEFINITION T.parva mitochondrion DNA for cytochrome oxidase subunits I and III, cytochrome b, and ribosomal RNA. ACCESSION Z23263 NID g437862 KEYWORDS cytochrome b; cytochrome oxidase; cytochrome oxidase subunit I; cytochrome oxidase subunit III; large subunit ribosomal RNA; ribosomal RNA. SOURCE Theileria parva. ORGANISM Mitochondrion Theileria parva Eukaryotae; mitochondrial eukaryotes; Alveolata; Apicomplexa; Piroplasmida; Theileriidae; Theileria. REFERENCE 1 (bases 1 to 5895) AUTHORS Kairo,A., Fairlamb,A.H., Gobright,E. and Nene,V. TITLE A 7.1 kb linear DNA molecule of Theileria parva has scrambled rDNA sequences and open reading frames for mitochondrially encoded proteins JOURNAL EMBO J. 13 (4), 898-905 (1994) MEDLINE 94155854 REFERENCE 2 (bases 1 to 5895) AUTHORS Nene,M. TITLE Direct Submission JOURNAL Submitted (06-JUL-1993) Nene V. M., International Laboratory for Research on Animal Diseases Nairobi Kenya FEATURES Location/Qualifiers source 1..5895 /organism="Theileria parva" /mitochondrion /isolate="Muguga" /germline repeat_region 1..60 /partial /evidence=experimental /standard_name="inverted terminal repeat" /citation=[1] /rpt_type=TERMINAL gene 38..1489 /gene="coI" CDS 38..1489 /partial /evidence=experimental /gene="coI" /function="electron transport" /note="The coordinates given is where an open reading frame starts. This ORF starts at the codon AGT." /citation=[1] /codon_start=1 /product="cytochrome oxidase subunit I" /db_xref="PID:g437863" /transl_table=4 /translation="SFIKFEGLFLVFNSVSGNHKIIGISYLWLAYWFGMIGFYMSVLI RTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDV VYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVGIDFIIFGLLA AGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVF LDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLSTYTTKEMFG NQTMILAMGFNSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTL QCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLSIG AIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISVLLTFLPMHFTGFSPLPRRIP DYPDEMWGWNFICTLGATMMLVLKLAILFIISL" CDS complement(2301..3068) /evidence=experimental /gene="coIII" /function="electron transport" /citation=[1] /codon_start=1 /product="cytochrome oxidase subunit III" /db_xref="PID:g437864" /transl_table=4 /translation="MRNSAQSYLKYINIINIFETLYLFYSTGLDTLEYIDSTYKNFII MYVNQYLLYGTTLKYLSVGEFFMNSLTIFINSIREIMTSTTMVMYAIFGMFIFSEILV FSTFIWGYFHLRLSNPILLAELNVEAYLQISDVLNTGSILVSIILHRVQESANFETDF FMEQLLLIGFIFLSLQNDEYSLILSYVNNYWMTLYFFILTGLHSLHVCAGGIFVLIQS YFYEGDGSQRDEEFNAGVYWHFVEMIWIALTMLLFLA" gene complement(2301..3068) /gene="coIII" rRNA 3093..3393 /partial /note="Fragmented rRNA sequence; codes for part of domain IV and V of LSU rRNA." /citation=[1] /product="large subunit ribosomal RNA (LSU1)" rRNA complement(3404..3514) /partial /note="Fragmented rRNA gene; codes for part of domain V of LSU rRNA." /citation=[1] /product="large subunit ribosomal RNA (LSU3)" rRNA complement(4365..4403) /partial /note="Fragmented rRNA gene; codes for part of domain V of LSU rRNA" /citation=[1] /product="large subunit ribosomal RNA (LSU2)" CDS complement(4423..5583) /evidence=experimental /gene="cob" /standard_name="cob" /function="electron transport" /note="Partial cDNA sequenced; extends from nucleotide 5506 to the end of the open reading frame - poly A addition on cDNA starts at nucelotide 4368." /citation=[1] /codon_start=1 /product="cytochrome b" /db_xref="PID:g437865" /transl_table=4 /translation="MFYKKVIKIKLGNRALTYKLTFIMNMFNAHIPSYLVPKNLNSNW NVGFILGILLILQILSGLLLTFFYVPCKEGAFESLSRLVTETQFGWFVRLYHSVGVSF YFFFMFIHIIKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATVIS NLLEWFGKAKVITFGGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLHREGSSNPL TLAEAVALLKFYQLILFSDVKFLVIISMFIGPQVGYGIWTLFQADNDNSILSSSENTP AHIIPEWYLLLFYATLKVFPTKVSGLVAMVVVLKLLIILVESRSKSQAVSTAHHHRVW TTTSVPLVPALFLLGCIGRMVINLDLIIIGIYGVLLSTTFVQKLLDSSRVRA" gene complement(4423..5583) /gene="cob" rRNA complement(5552..5619) /partial /note="Fragmented rRNA gene; codes for part of domain IV of LSU rRNA." /citation=[1] /product="large subunit ribosomal RNA (LSU5)" rRNA 5691..5770 /partial /note="Fragmented rRNA gene; codes for part of domain V of LSU rRNA." /citation=[1] /product="large subunit ribosomal RNA (LSU4)" repeat_region complement(5783..5895) /partial /evidence=experimental /standard_name="inverted terminal repeat" /note="Contains 12 bp direct and inverted sub-repeats." /citation=[1] /rpt_type=TERMINAL BASE COUNT 2018 a 889 c 879 g 2109 t ORIGIN 1 gacatatatt tgtttgtcgt ttaaagaaag tttttaaagt tttattaaat ttgaaggttt 61 gtttttggtt tttaattctg tgtcaggaaa tcataaaatt attggtatat cttatctgtg 121 gctggcttat tggttcggta tgatagggtt ttatatgagt gtgctgatta gaactgaatt 181 aagtatgagc gggttgaaaa taataactat ggatacttta gaaatttata atctattgtt 241 tacattacat ggtcttatta tggtattttt taatattatg actggtcttt ttggaggaat 301 tggaaattat ttgtatcctg ttcttttggg atattgtgat gttgtatatc caagagttaa 361 tctttatagt ttgttgtttc agccaattgg ttttgtgtta gtggtttctt ctatttattt 421 agaaattggt agtggtacag gatggacatt gtatccgcct ctttcaactt ctctttcaaa 481 tgttggtata gattttataa tatttggttt gttagcagct ggaattgcaa gtacattaag 541 cagtgtaaac tttataacta cttttacttc tgtaaaaaca ataggttttg tcattgatag 601 aatttcacct gccgcatggt caattgtttt aacttctttt ttgttattat tatctttacc 661 tgttgttact gcagtttttc ttatggtatt tttggacaga cattataata ctatgttttt 721 tgaatcttct aattctggag atccagtgtt gtatcagcat ttattttggt tttttggaca 781 tcctgaggtt tatattatga tattgccagg atttggtatt ataagtttgt tgttatcaac 841 atatactact aaagaaatgt tcggtaatca aactatgata ttagctatgg gtttcaatag 901 ctttgttagg ttgtttggtt tggggacatc atatgtacac atcaggtttg gaagcagata 961 ctcgcggtat tttacaacag ttacaatatt aattgccctt cccacaggta ataaaatatt 1021 caattgggta acaacattac aatgtgtcga atcaataaaa tctctcggac tagtattatt 1081 tacagtgtta tttatcgtta actttgttat aggaggtaca actggtgtgg tgttaggaaa 1141 cgccggaata gacttggcat tacacgatac tgtttatgta gttggacatt ttcatttcgt 1201 cctttcaata ggcgctataa tatcaatgat atgttttata atttatattc aaagaatgtt 1261 gttgtttgga attatactct caaatagatt atcatcgtta attgctccta tttttatgat 1321 atctgttttg ctaacttttc tacctatgca ttttactgga ttttcacccc ttccaagaag 1381 aataccagat tatcctgatg aaatgtgggg atggaatttt atttgtacac ttggagcaac 1441 gatgatgttg gtactaaaac ttgcaatatt attcattata tcattataaa aaatacacta 1501 ggcatgcaat accgaacagg gccaatttaa tttcattttc ttgcatcact gccattttgt 1561 tagctaaaca gaacttttta aaccataact tcaacttatt aatatatttt tcttgttaac 1621 tatttgtgcg ataattacat caaataccta aagagtcatc aatgatttaa tcctttggat 1681 ttttaatggg accatgaata gatatgtacc attttagtaa ttcaaaagag aattcataag 1741 taacctttgt gaaagtgata gcgagatggg aattgtgcct tctatagttt aatgtaattt 1801 ttgaattcgt aaaatagaaa agagatagcg ttatagctct tacagtcagt acgaagtcga 1861 aacaaggtag ttgacagtga acttgtagct gaacaaagta aagaaacaga tcgcatagtc 1921 aattagcttt ttttataaca atattttaaa atattcgaat acaattatat cgtcctttgt 1981 tttttagcat agatgatatt cttttataga aattagagtt ctattagcat acgtatataa 2041 cattgaaggt tataaatacg tgtcgagcag tgtgttcaaa gtagttatta cgcgaggaaa 2101 tgttaaatta ttaaaattca agatgaatcc gatttgatga tattataaga aatggctaat 2161 gatattattt aatatcagca tgggattata aaacagtata ttatgtattt taatttactg 2221 tcagctaaaa cgtatcaaat tctctactct gttaccttaa aaaattttca tttatttcaa 2281 atctatacag tacacattcg ttaagctaga aataacaaca ttgttaaagc tatccaaatc 2341 atttctacaa aatgccagta cactccagca ttgaattctt catctctttg agatccatca 2401 ccttcataaa aatatgactg tattagtaca aaaatgcctc cggcacatac atgtaacgaa 2461 tgaagtcctg ttaaaatgaa aaaatataat gtcatccaat aattgttcac ataagataga 2521 attaatgaat attcatcatt ttgtaacgat aaaaatataa accctattaa tagcaattgt 2581 tccataaaaa agtctgtttc aaagttggca ctttcttgaa ctctatgaag aattattgat 2641 actaaaatac ttccagtatt taaaacgtca gagatttgaa gataggcttc tacatttaat 2701 tcagctagta aaattggatt cgataatctt aaatgaaaat atccccatat aaatgtcgaa 2761 aacactaata tttctgaaaa tataaacatt ccaaatatag cgtacattac catagttgta 2821 gaagtcatta tctctctaat actatttata aatattgtta aactgttcat aaaaaattca 2881 ccaacactta aatatttaag tgtagttccg tataataaat attgatttac atacattata 2941 ataaagttct tatatgtgga atcaatatat tccagggtat ctaatcctgt actataaaac 3001 agatatagag tttcaaatat gttaattata ttaatgtact ttaaatatga ttgtgcgctg 3061 tttcgcattt gactacatag gttaacttac atagtccatt ttttaacgat aaatgaggag 3121 cgtctgttga atacctacac aagataatgc taagatttat atcgatgtat attatctgat 3181 acctgttcag tggtttctag ccaaacaaca gggatctctt ttaaagtaag aattgactat 3241 ctaaataata gtcatgtgaa tggtataacg acttctctat tgtctccact aaatgttcta 3301 tgaaatagac ttagctttga ataggaagct tgatatactg ggacggtaag accctgtgca 3361 ccttcacttc cctccgaaaa aaacaagttt tgcaaaacaa aaaggtatgg tgagacgaca 3421 tggaggtgtc aatagattaa ttacatgagt actataatta atctttaacc tgttatccct 3481 ggcgtacctt attaccaata gtagttatta gctctatatt tatatttatg tagaatatga 3541 tgtattgcct aatcttctca aacatgaact cgtttttcgc ctaacatgaa tttactatac 3601 tcgaattata cagtattgcc gcggctgctg gcactgcatg attttacaat ataatatcca 3661 atccttatgt atgcttgaat gctgtaatca ctttttataa caagtttgaa atactttatg 3721 tagttatata taatactgct agaatattta acgtctagta ctctttgacg tttaatatca 3781 attcctacgg ccatcatctc tttatactct taaatatttt aataatataa taactataag 3841 tttccttctg gaattatgtt aattttagta atgaaaatat cagtatatac agtaacttat 3901 tataggtcat tactcttcat aaaagatttc acagagaaca atctataatt gttcaattgg 3961 aatttatcta ttaactttat ttcgtccaac accgtttaag ggtgtaaggt tcgtaccaat 4021 gtattaaata aagttagatt acaattttta ctgaaatatt taattacgtt aattatcagt 4081 aagatatagt gcgtgaaatc aaattaaaca acatgttcca ctgatttcac tacttataac 4141 atttcaacat gtatgttacg tactaactga catccaaggc aaagaattgt aacacattaa 4201 tgtactgata aattagatga ttctgactta gtgtaattat aaaaaatata caaattaatg 4261 tatttaaaaa ttttctaaca tccaaatttt aaagtcctga tagcggttaa tctttcctat 4321 tccttacgta ctctggctag aacactttta catataaaac aaaactcttt caagacgcaa 4381 acttcccggc taaacttccc tccaccaggt gtttttcaac acctaggcac ggactctcga 4441 cgagtccagc aatttttgaa caaatgtagt agataacagg acgccgtaga taccaataat 4501 tatgagatcc agattaatga ccattcttcc aatacagccc aatagaaaca aggctggtac 4561 cagtggtaca cttgttgtgg tccaaactct gtgatgatgt gctgttgaga cagcttgtga 4621 tttagatctt gactctacta gtattatcaa taattttaat acaactacca tagctacaag 4681 tccagatact tttgttggaa acacttttaa tgttgcataa aacaaaagca aataccattc 4741 tggaataata tgtgcaggtg tgttttcaga gcttgataat attgaattat cattatctgc 4801 ttgaaacaat gtccaaattc cataaccaac ttgtggtcca atgaacatac ttattataac 4861 taaaaattta acatcactga ataatatcaa ttgataaaat tttaacaaag cgactgcttc 4921 agcgagtgtt aatggatttg aacttccttc tctatgaaga aaataaagat gaagaagaac 4981 aattacaagc acaacagcag gtaacacaaa atgtaaaata aaaaatcttt ttagggtctc 5041 tggacctact gtaaatccac cgaaagttat aactttggct tttccaaacc attctaacaa 5101 attcgatata actgtagctc cccaaaaact catttgacca tctggcaaca cataaccagt 5161 aaaagcaata actatactca aaattaaaat aactatgcca gagtaccaag accaaggcat 5221 atatttacta gaataccaca tacctttaat tatgtggata aacataaaaa agaaataaaa 5281 tgagacacca acagaatgat ataaacggac aaaccaacca aactgtgttt ctgtaacaag 5341 tctagaaaga ctttcaaaag ctccttcttt acaaggaaca tagaaaaagg ttagaagaag 5401 tccggataga atctgtaaaa tcaacaagat tccaagtatg aatcctacat tccaattaga 5461 atttaaattt ttaggcacta aatacgaagg tatatgtgca ttaaacatat tcattataaa 5521 cgttaatttg taggttaaag ccctatttcc taattttatt tttataactt ttttataaaa 5581 catttgtacc tgtcaagttc cttcactaaa tttaactcac agtatagaaa tatatttcaa 5641 atatgattgc aaaatggtat taaaatttaa tgcttgaata aggtttaata ggtatgagag 5701 ttctcatatt aatatggtac gtgagttggg ttaagaacgc cgcaaggctg ttcgttccct 5761 atctagatat ttaaattttt ataaccttca aatttaataa aactttaaaa actttcttta 5821 aacgaccaaa caaatatatg tctgaatttt aacgacatat atttgagtat cattattctt 5881 actcaaatat atgtc //