LOCUS MICEGEN2 4316 bp DNA 17-SEP-1999 DEFINITION Chlorogonium elongatum partial mitochondtial genome, 4316bp. ACCESSION Y13643 NID g3483052 VERSION Y13643.1 GI:3483052 KEYWORDS introninc ORF1; introninc ORF2; nad5 gene; NADH dehydrogenase. SOURCE Chlorogonium elongatum. ORGANISM Mitochondrion Chlorogonium elongatum Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Volvocales; Haematococcaceae; Chlorogonium. REFERENCE 1 (bases 1 to 4316) AUTHORS Kroymann,J. and Zetsche,K. TITLE The mitochondrial genome of Chlorogonium elongatum inferred from the complete sequence JOURNAL J. Mol. Evol. 47 (4), 431-440 (1998) MEDLINE 98440760 REFERENCE 2 (bases 1 to 4316) AUTHORS Kroymann,J. JOURNAL Thesis (1997) Universitaet Giessen, Tectum Verlag, Marburg, FRG REFERENCE 3 (bases 1 to 4316) AUTHORS Kroymann,J. TITLE Direct Submission JOURNAL Submitted (02-SEP-1996) J. Kroymann, Institut fuer Pflanzenphysiologie, Justus-Liebig-Universitaet Giessen, Heinrich-Buff-Ring 54-62, D-35392 Giessen, Hessen, FRG FEATURES Location/Qualifiers source 1..4316 /organism="Chlorogonium elongatum" /organelle="mitochondrion" /strain="2e" /db_xref="taxon:52029" misc_feature 83..113 /note="GC-rich element" mRNA join(<163..594,2023..2304,3397..>4316) /gene="nad5" gene 163..4316 /gene="nad5" exon <163..594 /gene="nad5" /number=1 CDS join(<163..594,2023..2304,3397..>4316) /gene="nad5" /EC_number="1.6.99.3" /codon_start=1 /product="NADH dehydrogenase" /protein_id="CAA73986.1" /db_xref="PID:g3483053" /db_xref="GI:3483053" /db_xref="SPTREMBL:O79860" /translation="MFLFPLVSTGLSSLISGSMIARYLGHRGSVVISLFCLFVSFFSS VLIWIEVCLGSSETYIDLFGSWFTVGSFNVSWTVYIDLYSAHMLLTVTSVSTAVHCYA VVYMRSDPHLNLFLSYLSLFTFFMLVLVCSESLINMLVGWEGIGVCSYLLIGYYSHRL SATKSAQKAILVNRVSDGLLLWGIVMIWWHTGSLEYDIILLSEVPYVSTFLSLAIMIG AMGKSAQILFHVWLADAMEGPTPVSALIHAATLVTSGVYVMARLSPFYDDLIIVVGSL TALMAGIFGFFQSDLKRVIAFSTCSQLGYMMVSIGLGEHGADAAMCHLMTHASFKAAL FLAAGVIIMAAAGNQHMGRYGGLSASHCSLYCFVTLLIGCLCLMGLPETSGFYSKETI INLSYVFFNPLADYAHTLLVIAAFITCTYTVKLFIQSFFYDFSGNDYSVSSASPNTSM LIFVAFTILLLDIVAKIWVGTNLLSGILFFVPWGVKTLPVGLMLAGFLTATAAVYPGN SSMALSLVRFNATRWGFDQLYARTLVLLVLDWGRIT" intron 595..2022 /gene="nad5" /number=1 CDS 896..1438 /gene="nad5" /note="intronic ORF1" /codon_start=1 /transl_except=(pos:1397..1399,aa:OTHER) /protein_id="CAA73987.1" /db_xref="PID:g3483054" /db_xref="GI:3483054" /db_xref="SPTREMBL:O79861" /translation="MHQIVVGCLLGDGHLERRGNTRLGKIFDFSVGISFKHVYKDVAD WYLTMFYGLGYQDNIAFENYSTRTYPSGRVYKYYQVRTRSYSNFNILYERWYPSRVKV VPAYIVEFLTPLALALWCMGDGSAMDCGGFKLSTHGFTYEDNLFLARTLKELYGLEVT LHRDPAAXPWAEAANIIIFM" misc_feature 1387..1414 /gene="nad5" /note="GC-rich element" misc_feature 1649..1680 /gene="nad5" /note="GC-rich element" exon 2023..2304 /gene="nad5" /number=2 intron 2305..3396 /gene="nad5" /number=2 CDS <2305..3156 /gene="nad5" /note="unnamed protein product" /codon_start=1 /transl_except=(pos:2593..2595,aa:OTHER) /transl_except=(pos:2611..2613,aa:OTHER) /transl_except=(pos:2620..2622,aa:OTHER) /protein_id="CAA73988.1" /db_xref="PID:g3646347" /db_xref="GI:3646347" /db_xref="SPTREMBL:O79862" /translation="KYTFKRGFRQWRTYFGYVPFYIIVAFFYIFFSLHAANTPLKVLG EYSYVALAFAPAVAPVGQPSSYQKEAIAGLMFSDGHIRNPNKGAPSWWQLSFXIYFCR XGTXFYSLASARGLAAGLKFVVLGTLSSLTLPSPQPKARPDQYWFATRNNIYFTQLHP LWYQTVNGATVKVIPPNSYLDENFSDVSLAFAIMGDGYWENDGGAKNLRFFGKVLICT ENFSPEEIDRFILFLDTKFGLKAGKKARNNSYRVRFSSVGDNLDRLRALVYPHMHPTM LYKLNLP" misc_feature 2634..2661 /gene="nad5" /note="GC-rich element" exon 3397..>4316 /gene="nad5" /number=3 BASE COUNT 1165 a 759 c 840 g 1552 t ORIGIN 1 gactgcttat ttttgagcca agtacaaaaa atagtggaag gaagaagagg gaaagcgaga 61 gaaaatctaa gggctcagtt cctaaccctg accctaaccc ttcgggtaag ggttaggatt 121 cgggtcagta ttagcccttg gaaacgatgc cctaaataac aaatgttttt atttccttta 181 gttagtacag gtttaagtag tttaattagt ggttctatga ttgctcgtta tttagggcat 241 cgtggtagcg tagtaattag tttattttgc ttatttgtaa gtttttttag cagcgtatta 301 atttggattg aagtatgttt aggttccagt gaaacttata tcgatctttt tggttcttgg 361 tttacagtag gttcttttaa cgtatcttgg acagtatata ttgatttata tagtgctcat 421 atgttattaa ccgtaacttc tgttagtact gctgttcatt gttatgcagt agtatacatg 481 cgtagtgatc ctcatttaaa cttattttta agttatttat ctttatttac cttctttatg 541 ttagtactcg tatgtagcga aagcctaatt aatatgttag ttgggtggga aggtattaca 601 ccccaatgcc ttagtagtgc aagtaattta ttatcttatg tagataacgt gtgcttgttt 661 ggatattacc cagtccaata tgtaaataat atcatgcaaa attccttttt tgtaagtaat 721 tcgcttaaca ttctgaatta tgtgcaaaat gtttataatt tcctttgtag tcattacgtc 781 aaaaaaatct tcgatttttt tgtaagtgtc gtttagtgcc acttccattt tatttagttc 841 ttttattgcc ggccccgcgc gtgcttataa tactgatgta cctttatccc ctcttatgca 901 tcaaattgtc gtcggttgct tattaggaga tggtcactta gagcgccgcg gcaatactcg 961 actaggaaaa atcttcgatt tttccgtagg tatttctttt aaacacgtgt ataaagacgt 1021 tgctgattgg tacttaacca tgttttatgg tttaggttat caagacaata ttgcttttga 1081 aaattactca acacgaactt atccttctgg tcgtgtttat aagtattatc aagttcgtac 1141 ccgcagctat tctaatttta atattcttta tgaacgctgg tacccatctc gcgtaaaagt 1201 agtaccagct tatattgttg aattcctaac tccactcgct ttagctctgt ggtgtatggg 1261 tgacggctcg gcaatggatt gtggtggttt taaattatca acacatggct ttacttatga 1321 agacaattta tttctagccc gtaccttaaa agaattatac gggctagaag ttactttaca 1381 ccgtgacccc gcggcgaggc cttgggccga agccgcaaat attatcatct ttatgtaaca 1441 gccggctcta cttacaaaaa aatcttcgat ttttttgact aaactttttg ctttagtaaa 1501 accatatctg ttaccttctt gtttttataa attcgaaaca ttcatttccc cttcggggtc 1561 gaaataattc ctaatttttg gcttagccgc atggtatttt tgtataacta agtcgtatac 1621 gtgtgaaagt ttaactaaat tattcggctt acccagaccc tgacccttcg ggtaaaggta 1681 aaggtataag cgcttaactt agccaacgaa cacagtaaat ttatgatttt tgaacggcct 1741 tggtcctttt ggggcagagc cccaaacagc caaagggcga aaggttaaaa atcataaatt 1801 tggaataaac ttttgcaatt tattgcgtat tttaacaata aatagcgtat attaacgctg 1861 acaggcgttt atttgcttag attattttta agtgaagggc aatgacggtg aaaacgatca 1921 aagtatacac tagatcgtcg gattttactg tgttagttcg cgacagactg ggtcaccgtt 1981 gggtgcctga aaaggtgctt aatgcacagt cgacagtatt tgattggggt ttgtagttac 2041 ctattaattg gttactatag ccatcgttta tccgctacta aaagtgctca aaaagccatt 2101 ctagttaatc gtgttagtga tggtttatta ttatggggta ttgttatgat ctggtggcat 2161 actggctcat tagaatatga tattattctc ttaagtgaag ttccttatgt tagcactttt 2221 ttaagtttag caattatgat tggtgctatg ggtaaaagtg cacaaatttt atttcatgtg 2281 tggcttgccg atgccatgga gggtaaatac acattcaaac gcggctttcg ccaatggcga 2341 acatactttg gttacgtgcc attctatatt attgttgctt ttttttatat ttttttctct 2401 ttacatgctg caaatactcc cttaaaagtt ttaggggaat attcttacgt tgcgctggct 2461 tttgctccgg cggtggctcc agtgggtcaa ccttcttcgt atcaaaaaga agcgattgcg 2521 ggtttaatgt ttagtgacgg tcatattcgt aatcctaata aaggggcgcc gtcctggtgg 2581 caactatcgt ttagaattta cttttgccgc tgaggtacta gattttattc tttggcttcg 2641 gcccgaggcc ttgccgctgg gttaaaattt gttgtattag gaactctctc aagtcttact 2701 ctgccctctc cacaaccaaa agcacgacct gatcaatatt ggtttgcaac acgaaacaac 2761 atttatttta cccaattaca tcctctttgg tatcaaacag taaatggagc tactgttaaa 2821 gtaatccctc caaattccta tttagatgag aatttttcag acgttagttt agcgtttgct 2881 attatgggag atggttactg ggaaaatgac ggcggggcaa aaaatcttcg attttttgga 2941 aaagttttaa tttgtactga aaacttctct cctgaagaaa ttgatcgttt tattctattt 3001 ttagatacta aatttggatt aaaagctggt aaaaaagcac gcaataattc atatcgtgtt 3061 cgtttcagca gcgttgggga caatttagac cgtttacgag ccttagtcta tccccacatg 3121 catccaacta tgttatataa attaaacctt ccttaaggag gtgtgcatga tttagatttt 3181 taattagaat aaggtgttgg gccctcccta aaccccgcta tatgctggaa actcctagaa 3241 atatggataa tcagcaagaa acgcgtacaa tttcaaataa tttggaaaaa tgtgcgtgat 3301 tctccagaga ctacacgcgg gggtgttaag caatcttaac atatcatata gtccaccctc 3361 tttatcttaa aataaaagaa agagggataa aaaaagccaa ctcctgtatc agctttaatt 3421 cacgctgcta ctcttgtaac tagtggtgta tacgtaatgg cacgcttaag tcccttttat 3481 gatgatctaa tcattgttgt aggttcatta acagcattaa tggctggtat tttcggtttc 3541 tttcaaagtg atctaaaacg tgtcattgcc ttcagtactt gtagtcaatt aggttatatg 3601 atggtttcca ttggcttagg tgaacacggt gcggacgctg ctatgtgtca cttaatgact 3661 cacgctagtt ttaaagctgc tttattctta gcagcaggtg tcattattat ggctgcggcc 3721 ggtaatcaac atatgggacg ttacggtggt ttaagtgcat cacattgttc cttatattgc 3781 tttgtcaccc tattaattgg ttgcttatgc ttaatgggtt taccagaaac ttctggtttc 3841 tactccaaag aaaccattat taacctatct tatgtatttt ttaacccatt agctgattat 3901 gcacatacct tattagtaat tgctgcattt attacttgca catataccgt taaattattt 3961 attcaatcat tcttctatga cttcagtggt aatgattatt cagtaagcag cgctagccca 4021 aatacaagca tgttaatttt tgttgctttc actatcctat tattagatat cgtagctaaa 4081 atttgggtag gtactaattt actttcaggt attttattct ttgttccttg gggcgttaaa 4141 acacttccag tgggtttaat gttagctggt ttcttaactg ctacagctgc cgtataccct 4201 ggtaattcgt caatggcttt aagtttagta cgttttaatg ctactcgttg gggttttgac 4261 caattatatg cccgtacatt agtgttactt gtgttagatt ggggacgaat tacttg //