LOCUS MICEGEN1 4537 bp DNA 17-SEP-1999 DEFINITION Chlorogonium elongatum partial mitochondrial genome, 4537bp. ACCESSION Y07814 NID g2181939 VERSION Y07814.1 GI:2181939 KEYWORDS apocytochrome b; nad5 gene; NADH dehydrogenase subunit 5; ribosomal gene fragment L3; rrnL3 gene. SOURCE Chlorogonium elongatum. ORGANISM Mitochondrion Chlorogonium elongatum Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Volvocales; Haematococcaceae; Chlorogonium. REFERENCE 1 (bases 1 to 4537) AUTHORS Kroymann,J. JOURNAL Thesis (1997) Universitaet Giessen, Tectum Verlag, Marburg, FRG REFERENCE 2 (bases 1 to 4537) AUTHORS Kroymann,J. and Zetsche,K. TITLE The mitochondrial genome of Chlorogonium elongatum inferred from the complete sequence JOURNAL J. Mol. Evol. 47 (4), 431-440 (1998) MEDLINE 98440760 REFERENCE 3 (bases 1 to 4537) AUTHORS Kroymann,J. and Zetsche,K. TITLE The apocytochrome-b gene in Chlorogonium elongatum (Chlamydomonadaceae): an intronic GIY-YIG ORF in green algal mitochondria JOURNAL Curr. Genet. 31 (5), 414-418 (1997) MEDLINE 97306270 REFERENCE 4 (bases 1 to 4537) AUTHORS Kroymann,J. TITLE Direct Submission JOURNAL Submitted (02-SEP-1996) J. Kroymann, Institut fuer Pflanzenphysiologie, Justus-Liebig-Universitaet Giessen, Heinrich-Buff-Ring 54-62, D-35392 Giessen, Hessen, FRG FEATURES Location/Qualifiers source 1..4537 /organism="Chlorogonium elongatum" /organelle="mitochondrion" /strain="2e" /db_xref="taxon:52029" mRNA <1..>55 /gene="nad5" exon <1..>55 /gene="nad5" /number=3 gene 1..55 /gene="nad5" CDS <1..55 /gene="nad5" /EC_number="1.6.99.3" /codon_start=2 /product="NADH dehydrogenase" /protein_id="CAA69147.1" /db_xref="PID:g2181940" /db_xref="GI:2181940" /db_xref="SPTREMBL:O03888" /translation="STGDKGLFIVHDQKVSL" repeat_region 67..162 /rpt_type=DIRECT mRNA join(<201..593,2179..2214,3523..>4251) /gene="cob" gene 201..4251 /gene="cob" exon <201..593 /gene="cob" /number=1 CDS join(201..593,2179..2214,3523..4251) /gene="cob" /codon_start=1 /product="apocytochrome b" /protein_id="CAA69144.1" /db_xref="PID:g2181941" /db_xref="GI:2181941" /db_xref="SPTREMBL:O03454" /translation="MRINHKLGSLKVLNNHLVIYPTPLNLNYAFKFGSLAGVVLMVQI VTGILLAMHYTAHVDHAFSSVIHLMNDVPSGMILRYTHANGASLFFTVVYLHTFRGIY YSSGNQPRELVWITGVVILLVMIITAFIGYVLPWGQMSLWGATVITSLATVIPVVGKD IVTWLWGGFSIDNPTLNRFYSFHYTLPFILAGLSIFHIAALHQYGSTNPLGVNTQTST IPFGTYFATKDLLGVLYLFLAFSILVFFYPEVLGHPDNLIPANPYVTPQHIVPEWYFL WVYAILRSIPNKAAGVIFIGLTFASLIALPFLSSVHVGSPKFRVLSERFFWVFVADVF LLTWVGAQEIMPATVLLGQVCTFVLFVYLLVIYPFLSMLESYVYLSATNKN" CDS <594..1493 /gene="cob" /note="intronic ORF3" /codon_start=1 /protein_id="CAA69145.1" /db_xref="PID:g2193888" /db_xref="GI:2193888" /db_xref="SPTREMBL:O03455" /translation="FNGQKWVLNNAIDLTDCTSFNIYLACVVGNKPIIELNTKSNSKV TITPVKSYYNLHTTETQLSILQDNKHKSGVYLVRNDINGNCYVGSAASNRINVRFRNH CIHLNNTNVRLSRAINKYGLHNFSFHILEYYSGFVHKENLSSNHLSLLALETSYINKL DPVYNILTVAGSSLGYKHTVETRNKMKVNFSQERKDFIGNLNKGKTAPEETRALMSLK AKERYSDPVFKAEFLLKNKDNFFKPAPINLVDSDGKILASFKSISAAAKHYGGCRKHL SQHVDKPNMKYKGLGYLKSVVSK" intron 594..2178 /gene="cob" /number=1 misc_feature 1966..2086 /gene="cob" /note="GC-rich element" exon 2179..2214 /gene="cob" /number=2 misc_feature 2215..3093 /gene="cob" /note="GC-rich element" intron 2215..3522 /gene="cob" /number=2 CDS <2215..3093 /gene="cob" /note="intronic ORF4" /codon_start=1 /protein_id="CAA69146.1" /db_xref="PID:g2193889" /db_xref="GI:2193889" /db_xref="SPTREMBL:O03456" /translation="EVCPKWLNLILCLFVGITHWVLPMFLLCYVDYVWASCFSPLANN LLKLANLVNSLFWPFARYFSSRRNRRGGLDTEHKAFFHPKIKAKNRHGPHRWEFVQVA VGLLLSDAHAEVHGNGVRISFQQEKTFADYFSFVYGILERLGYVTRKGVSDGTGEVSF HTRNQGARTYFRLNTFTFSSLIWLRELFYDANGVKVIRPELINYLTPISLRHAICGDG SSTDYGTSLSFNSFTYEECVLFTNMLKEKFGIIASVQSAGAPNQYRVYIQAASMNTLR AIVLPHMPKSMHYKVI" exon 3523..>4251 /gene="cob" /number=3 misc_feature 4347..4395 /note="GC-rich element" misc_feature 4417..4498 /note="GC-rich element" rRNA <4527..>4537 /gene="rrnL3" /product="ribosomal gene fragment L3" gene 4527..4537 /gene="rrnL3" BASE COUNT 1290 a 933 c 844 g 1470 t ORIGIN 1 gtcaacaggt gataaaggac tattcattgt acatgatcaa aaagtgtctt tataggaaaa 61 attagccctt tcggctcgcc tttcggctcg cctttcggct cgcctttcgg ctcgcctttc 121 ggctcgcctt tcggctcgcc tttcggctcg cctttcggct cgcccgaaac tcagggtaag 181 gggtaaaata catatattaa atgcgtatta atcacaaatt aggatcttta aaagtactaa 241 ataaccattt agtaatctat ccaactcctc tcaacctcaa ctatgctttt aaattcggtt 301 cattagctgg tgtcgtatta atggttcaaa ttgtcaccgg tattctttta gccatgcact 361 atacagcaca tgtagaccat gcctttagca gtgtaatcca tttaatgaat gacgttccca 421 gcggcatgat cttacgttac actcacgcca acggtgcttc attattcttc actgtcgtat 481 atttacacac tttccgcggt atttattaca gcagtggtaa ccaaccacgt gaacttgttt 541 ggattactgg cgtagtcatc ttattagtaa tgatcattac tgccttcatt ggttttaacg 601 gccaaaaatg ggtcttaaat aacgctattg atctaacaga ctgtacatct tttaatattt 661 atttagcttg tgtggtagga aataagccta ttattgagtt aaatacaaaa agtaatagta 721 aagttactat tactcctgtc aaatcatatt ataatctgca tacaactgaa acacagttat 781 ctattttaca agacaataaa cacaaatctg gtgtttattt agttcgaaat gatattaatg 841 gtaactgcta tgtaggtagt gctgcgtcaa atcgtattaa cgtccgattc cgcaatcact 901 gtattcattt aaataatact aatgtccgat tatctcgtgc aattaataaa tacggccttc 961 ataatttttc ttttcatatt ctagaatatt attccgggtt tgttcataaa gaaaacttaa 1021 gctcaaatca cttaagtcta ctagctctcg aaacatctta tattaacaaa ttagatccgg 1081 tctataatat tttaactgta gccggttcct ctttagggta taaacataca gtagaaactc 1141 gtaataaaat gaaggtcaat ttttcacaag aacgtaaaga ctttatcggc aatctaaata 1201 aaggcaaaac tgccccagaa gaaacccgtg ctcttatgag cctaaaagca aaagaacgtt 1261 attccgatcc tgtttttaaa gctgaattct tattaaaaaa taaagacaat ttttttaaac 1321 ctgctccaat taatttagta gactcagacg ggaaaattct agcttctttt aaatccatca 1381 gtgctgccgc taagcactat ggtggttgcc gtaaacatct cagtcaacat gtagataagc 1441 caaatatgaa atataaaggt ttgggctatc taaaatcagt cgttagtaaa tagcatattt 1501 atatctatag tgaactgcac aaaatttcaa aattttgagg cgtttgcgat gtcgatgaaa 1561 acggttaacg aaatttgttt ctatttcaag accgtcggtt ctaaaaaggt taattatact 1621 cacgtaagta tttttgatac ggatcgctac agactagttc atcgatgggt gtttctctca 1681 gccgtacccc ttcggggtca ggctgagtaa cgaaatgctt aatgtatagt cgggatatcc 1741 cattactttg taaagcttta cagagtaatg ttcaaggcca aatttcaggc ttcggccctt 1801 acccttcggg tcaggccttg ccgagggctc ggacttttct atatttgggc tacgccgttt 1861 ttggccttgt cgaggctagc ctcaacaagg ccaaacaggc tatgccgcct ttgggttccc 1921 caaaggggaa tcgaacttcg gcccaaggct gttagggggc tttgccgatt ccgattcccc 1981 ttaccccctt ctaaccccaa agggggctct ccttatttgg cctaaaaggc caaacaaggc 2041 tcgcccgaaa gtacggggct cggactgcga agccgcccaa gggcccaaag ccgcagggtc 2101 caagtctgaa ctaggcacag atctttataa tacgaaacaa tagattatga tctataatta 2161 ttataaagag gatatttgta tgtcttacct tggggtcaaa tgtcattatg gggtgaagtt 2221 tgccccaaat ggcttaatct tattctgtgt ctttttgtag ggatcaccca ttgggttctc 2281 ccaatgtttt tactttgtta cgttgactat gtctgggctt catgtttttc gcctttagcg 2341 aacaatctac ttaaactagc aaacttagtc aatagtctct tttggccttt tgctcgttac 2401 ttttcttccc gacgtaatcg tcgtgggggt ttggataccg aacataaggc gttttttcac 2461 cctaaaatca aagcaaaaaa tcgtcacggc ccccaccgct gggagttcgt acaagttgca 2521 gtcgggcttt tattatccga cgcccacgcg gaggtacacg gtaatggggt acgtatctct 2581 tttcaacaag aaaaaacatt tgctgattac ttttcatttg tatatggtat ccttgaacgc 2641 ttaggttacg ttactcgtaa aggagtaagc gatggtaccg gcgaagtaag ttttcatact 2701 cgaaatcaag gcgcccgtac ttatttccgc cttaatactt ttacttttag ttctttaatt 2761 tggctacgtg agttatttta tgacgctaac ggtgtaaaag ttattcgtcc tgaattaatt 2821 aactacctta cacctattag cttacgtcac gctatttgtg gtgacggttc cagtactgac 2881 tacggaactt ctctaagttt taacagtttt acttatgagg aatgcgtact gttcactaat 2941 atgctaaaag aaaaatttgg cattattgct agcgttcaat ctgcaggggc tcccaaccaa 3001 taccgtgtgt atattcaagc tgcgtcaatg aacacactac gcgctatcgt attaccgcat 3061 atgcccaaat caatgcacta caaagttatt taatatgccc ttgggctctt cgcccgcctc 3121 cccgcctccc cgaaggggcg ggaggcgggg aggcgaaggt tcacttaact tatttaaagg 3181 ttcttataag acaaaaatat ttaataggat taaagccata gtccagttta tgcacgtgcg 3241 caatagtatc ttaaaagcgg cttttgtaaa gattttacaa ttaatcttta tgacataaac 3301 gccggcccca aaaagcactt atacggggac tggtatatat acattatata gggcaatgct 3361 cgtgaaaacg gttaacgaat atatcttata tttaagaccg tcggcacaga tacgtgtcgc 3421 tacagactgg ttcgcgagtg ggtacctgca acggtgctta atgtacagtc gaaagcttca 3481 atattcagca taggtcattg agcctatgac ttagaagctt cggcaactgt aattacttct 3541 ttagctaccg ttattccagt agttggtaaa gatattgtaa cttggttatg gggtggtttc 3601 agtattgata acccaacttt aaaccgtttt tacagttttc actatacttt accatttatt 3661 ttagctggtt taagtatttt ccacattgct gctttacacc aatacggtag cacaaaccca 3721 ttaggtgtaa acacccaaac tagtactatt cctttcggta cttactttgc gactaaagat 3781 ttattaggag tattatactt attcttagcc tttagtattt tagttttctt ttatccagaa 3841 gtactcgggc atccagataa tctaattcct gctaaccctt acgtaacccc acaacacatc 3901 gtgcctgaat ggtatttctt atgggtatat gctatcttac gtagtattcc aaataaagct 3961 gcaggtgtta tctttattgg cttaactttt gctagcttaa tcgctttacc attcttaagc 4021 tctgtacatg ttggttctcc taaattccgt gttttaagtg aacgtttctt ttgggtattt 4081 gtagctgatg tattcttatt aacttgggta ggagcacaag aaattatgcc tgctaccgta 4141 ctattaggtc aagtttgcac ctttgtgcta tttgtttacc tcttagtaat ttacccattc 4201 ttaagcatgc ttgaaagtta tgtatactta agtgcaacaa acaaaaacta atatatatat 4261 atatatatat atatatatat tcatcctttt tatttttgcc ttatttggct tttttctttg 4321 gctattccga cccaaagggg ggttccaaaa atcttagatt tttgcccttg ggcgctttgc 4381 agcccgaacc cccgaggaat agccaaaagg gaatagcaac tcaccaagta caaaaaaata 4441 atggaaaaat aataaattac gtaggaacag ccccacggca aggccttggg ccgaagcctc 4501 tcaaaaatta atttttttga acaagtagat aatagta //