LOCUS AY733088 5996 bp DNA circular INV 30-NOV-2004 DEFINITION Plasmodium relictum isolate jb3.zoopeng mitochondrion, complete genome. ACCESSION AY733088 VERSION AY733088.1 GI:52222051 KEYWORDS . SOURCE mitochondrion Plasmodium relictum ORGANISM Plasmodium relictum Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5996) AUTHORS Beadell,J.S. and Fleischer,R.C. TITLE A restriction enzyme-based assay to distinguish between avian hemosporidians JOURNAL Unpublished REFERENCE 2 (bases 1 to 5996) AUTHORS Beadell,J.S. and Fleischer,R.C. TITLE Direct Submission JOURNAL Submitted (24-AUG-2004) Genetics Program, Smithsonian, 3001 Connecticut Ave., NW, Washington, DC 20008, USA COMMENT Sequence indels compared to Plasmodium falciparum and probable use of non-traditional start and stop codons make annotation without experimental evidence unreliable. FEATURES Location/Qualifiers source 1..5996 /organism="Plasmodium relictum" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="jb3.zoopeng" /specific_host="Spheniscus demersus (from zoo, not in natural habitat)" /db_xref="taxon:85471" /country="USA" ORIGIN 1 agcttttggt atctcgtaat gtagaacaat aatgggttga ccgtcaaatc cttttcatta 61 aaagagtgga ttaaatgccc agccaacacc atccaatttg attgggaatt atctgtgtta 121 caaaattttt tgatcccagg ctggtaaaaa atgtaaactt ttagcccaaa agaatagaaa 181 cagatgccag gccaataacc caaataagag ctatgacgct atcgattttg acaaggcggg 241 taaattcttt catagaactt aacgtatcat cttccataca tagataaaac ggtagatagg 301 gaacaaactg cctcaagacg ttcttaaccc agctcacgca tcgcttctaa cggtgaactc 361 tcattccaat ggaaccttgt tcaagttcaa atagattggt aaggtatagc gtttactatc 421 gaatgaaaca atgtgttcca ccgctagtgt ttgcttctaa cattccattt gcttataact 481 gtatggacgt aacctccagg caaagaaaat gaccggtcaa aacggaatca attaactatg 541 gatagctgat actagcaatt tatcattact caagtcagca tagtctatat gaaggtttct 601 atggaaacac acttcccttc tcgccattta tttttgatag cggttaacct ttctttttcc 661 ttacgtactc tagctatgaa cacaatattt ttcgtccata atagcaaaat acttgaaaca 721 ggacatatta ttcagaatag aataagaatt ctataaataa ccaaacaatt tctacaaaat 781 gccagtataa taaagttatt tgatcagaat gaggtaaaac tatatatgat aatccaaata 841 atgaatatga ccattcacta tttgtatcat aaacttctac tattcttata aagtatgtta 901 ataataatat taaaccaaca ataacatgtg aaaaatgtaa acctgtaaca caataaaata 961 atgtacctaa aattgcatca ttaatacaat attctaaatg taaatattca gttgtttgta 1021 atgatgcaaa acattcacca ataatataaa taatacatac aatacttgaa atttcaaaac 1081 tcataccttt ttctataagg aattgtaaac atgcagtcat acaagaagca cttgctaata 1141 taaatgttat tgttaaaatt aacattctag atgaagttaa aataatacct tcatttgata 1201 atggatatgg agataaacta aaatgtaaaa taccccaaaa atatgtaata aataataatg 1261 cttctgatat aataattgat aacataccag atgctaatga agaaaatgta gaataaaaac 1321 tttctcttat agaatataaa tatatcatta aaataatagg attaaaagta aataaaatac 1381 caacagagaa atattttaaa gatgttgcat ataatgatgt taatgaagga taagatacta 1441 aatgtgcttt tatattatta tagttactaa atataaagaa tattatttat aagaacggtt 1501 ttttttgtgt accgtaaaca tataacggta agaaggttcg ccggggataa caggttatag 1561 tatatatgga gctctaatcc ttatatacta ttggcacctc catgtcgtct catcgcagcc 1621 ttgcaatata ataaaaaata tagcgtgtat tgttgccttg tacacaccgc tcgtcacgca 1681 agaattattc aattttgatg aagaactcca ggcgttaacc tgtagagttg agatggaaac 1741 agccggaaag gaaatattac gtccaaacgt taagatcata tatgaaatat actagcatgg 1801 gactaaaaaa tgttatgctg ttggtttaag ccctttttta ccatacaaga gatcgcgtac 1861 tttggaccga aaaaagctgt gaggaaacta cattaaagga actcgactgg cctacataat 1921 aagaacgaac gcttttaacg cctgacatgg atggataata ctcggctttt ccaaagtata 1981 accgctgtcg ctgggactgt atggatcgaa tcttactcac tcatatccaa gcctcaatta 2041 ttatttatta ttttattttt caaagatatg cacttattac aaattgtaac cataaaactt 2101 taggtttata ctatttatgg ttctcatttc tatttggtag ttatggtttc ttattatctg 2161 ttattttacg tacagaatta tattcatcat cattaagaat tattgctcaa gaaaatgtca 2221 acttatataa tatgatattt acaattcacg gtattattat gattttcttt aatataatgc 2281 caggattatt cggtggattt ggtaattact ttttaccaat tctatgtgga tctccagaat 2341 tagcttatcc aagaattaac agtatatcac tattattaca acctattgct tttggattag 2401 taattctatc cacagctgct gaatttggtg gaggtacagg atggacatta tatccacctt 2461 taagtacttc attaatgtct ttatctcctg ttgctgtaga tgttatagtt attggtttat 2521 tagtatctgg aatagctagt ataatgtctt ctttaaattt cattactaca gtaatgcatc 2581 tacgtgcaaa aggattaaca cttggtatat taagtgtatc tacatggtca ttagtaataa 2641 catctgttat gttattatta acattacctg ttttaacagg tggagtacta atgttattat 2701 ctgatttaca tttcaatact ttattttatg atccaacatt tgcaggtgat cctgtattat 2761 atcaacactt attctggttt tttggtcatc ctgaagtata tattttaata ttaccaggtt 2821 tcggtgtaat tagtcatgta atatctacta attactctag aagcttattt ggtaatcaat 2881 ctatgatttt agcaatgagt tgtattgcta ttttaggtag tttagtttgg gctcatcata 2941 tgtatacaac aggtttagaa gtagatacta gagcatattt tacttctaca acaattttaa 3001 tatctattcc aacaggtaca aaagtattta attggatatg tacatatatg ggtagtaatt 3061 ttggtattac tcatagctca tctttattag cattattatt tatatgtaca tttactttcg 3121 gtggtacaac tggagtaatt ttaggtaatg ctgcaattga tatagcttta catgatacat 3181 attatgttat tgctcatttc catttcgttt tatcaatagg agctataatt gcattattta 3241 caacagtaag tgcatttcaa gaaaatttct ttggaaaaca tttacgtgaa aattcaataa 3301 taatattatg gtcaatgtta ttcttcgtag gtgtagtttt aacattttta cctatgcatt 3361 tccttggatt taatgtaatg cctagacgta ttcctgatta tccagacgct ttaaatggtt 3421 ggaatatgat ttgttctatc ggatcaacta tgactttatt tggtttatta atttttaaat 3481 aatattaaac tatttttttt gtttttatga attttcattc tataaatctt gcaaaagcac 3541 atttaattca ttatccatgt ccattaaata ttaatttctt atggaattat ggatttttat 3601 taggaatagt attttttatt caaattttaa caggtgtatt attagcaact tgttatactc 3661 cagaaatatc atatgcatat tatagtgtac aacatattct aagagaatta tggagtggat 3721 ggtgttttag atatatgcat gcaacaggtg cttcatttgt atttatttta acttacttac 3781 atattttaag aggattaaat tattcatatt catatttacc attatcatgg atttcaggat 3841 taataatatt cttaatatct atagtaactg cttttatggg ttatgtatta ccttggggtc 3901 aaatgagttt ctggggtgct actgtcatta ctaatttatt atattttatt ccaggacttg 3961 tatcatggat ttgtggtgga tatcttgtta gtgacccaac attaaaaaga ttctttgtat 4021 tacactttac attcccattt atagctttat gtattgtatt tatacatata ttctttttac 4081 atttacaagg tagcactaat cctttagggt atgatacagc tttaaaaata cccttctatc 4141 caaatctatt aagccttgat attaaaggat ttaataatgt attagtttta tttttatctc 4201 aaagtttatt tggaatttta ccattatctc atccagataa tgcaataaca gtagatagat 4261 atgcaactcc tttacatatt gttccagaat ggtatttctt acctttttat gcaatgttaa 4321 aaaccattcc taataaaaca gctggtttat tagttatgtt agcatcatta caaatattat 4381 ttttactagc agaacaaaga aatttaacaa ctctaataca atttaaattt gcttttggtg 4441 ctagagaata ttcagttcct actatctggt ttatatgttc attctatgct ttattatgga 4501 ttggatgtca attaccacaa gatatttaca ttttatatgg tcgtctattc attatattat 4561 tcttctttag tggtttattt acacttgttc aagcaaaaag aacacattat gattacagct 4621 cccaagcaaa catattatat tacaaggctg cgataagtcg atatttctga gcattgagcg 4681 gaacaaaaca gaccgtaagg ttataattat gattatagtt aggataatat aaatatagtt 4741 accatagctg ttgatggatg cttcgatcat taaatatatt cgagtatcaa tcgagttaac 4801 atgctcagcc gccaaaaaaa aacgatatta ttaccgtaca agccgttagc aagacatgac 4861 agggagttgg caagttaaag aagttctggt ttaaaataga tacgttttta aagttaggat 4921 gtatgggata attgtagtac accttgattg gtttaactat ttttggtaca tagaagtact 4981 tatatgttcg gtattgcatg cctggtgttt ttaattaaga cgctgacttc ctggctaaac 5041 ttcccaatga tgtatcttcc aaatagattt cgcagaaaac cgtctatatt catgtttgat 5101 tgacctttaa ccactaatta cgaatcttcc aagaatattt caagagtcca aggttcggtc 5161 tattattttc ctgttctgta attagatcac atgctttata gttcatggag acatggctat 5221 attccactat tcatagagac aacttgtggc atctctctcg atttccagat gttgagttac 5281 taagaggatt ctctccacac ttcaattcgt acttccacta ccaaaatatt ctctcctgtt 5341 caaacattct agggtttttc gcgttttttc aggagaaatc cgtatatcga tgtctttaaa 5401 aattacgcta ttggattcaa cgtccaggac ttcctgacgc ttaataacga tttctacttc 5461 cagcagccat tttggttcag ctacaagttc actgtcaact accatgttac gacttcgcac 5521 cgactgtttc ttttacctca cgagtcgatc aggaaggttt catccttaaa tctcgtaacc 5581 atgccaacac ataagaactt tttagggaag ttaaggtgct cagggtctta ccgtcgggcc 5641 gtagtattcc acatattcat ggataattct atttattagg agtctcacac tancgacaat 5701 ggggaagtcg ttacaccgtt catgcaggac ggagattacc cgacaaggaa ttttgctacc 5761 ttaggaccgt ttacgataca gccgccgttt atcattgatg ccgggcagat gtcagtaact 5821 tgaactattc atcggaatta tcagtgactt gtgttgtaac cttacagacg cttccagata 5881 attaacttct tataaatggt agcgccggtt tcccgggtct ccaatccagt gctccattca 5941 aggcatagag actcagcctg tgttcaactt tgtagggtta tttataatat aaatat // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Dec 8 2004 11:02:33