LOCUS AY733087 5970 bp DNA circular INV 30-NOV-2004 DEFINITION Haemoproteus sp. jb2.SEW5141 mitochondrion, complete genome. ACCESSION AY733087 VERSION AY733087.1 GI:52222050 KEYWORDS . SOURCE mitochondrion Haemoproteus sp. jb2.SEW5141 ORGANISM Haemoproteus sp. jb2.SEW5141 Eukaryota; Alveolata; Apicomplexa; Haemosporida; Haemoproteus; unclassified Haemoproteus. REFERENCE 1 (bases 1 to 5970) AUTHORS Beadell,J.S. and Fleischer,R.C. TITLE A restriction enzyme-based assay to distinguish between avian hemosporidians JOURNAL Unpublished REFERENCE 2 (bases 1 to 5970) AUTHORS Beadell,J.S. and Fleischer,R.C. TITLE Direct Submission JOURNAL Submitted (24-AUG-2004) Genetics Program, Smithsonian, 3001 Connecticut Ave., NW, Washington, DC 20008, USA COMMENT Sequence indels compared to Plasmodium falciparum and probable use of non-traditional start and stop codons make annotation without experimental evidence unreliable. FEATURES Location/Qualifiers source 1..5970 /organism="Haemoproteus sp. jb2.SEW5141" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="jb2.SEW5141" /specific_host="Lichenostomus frenatus" /db_xref="taxon:292794" /country="Australia" ORIGIN 1 agcttttggt atctcgtagt gtagaacaat aatgggttga ccgtcaaatc cttttcatta 61 aaagagtggg ttaaatgccc agccaacacc atccaatttg attgggaaaa tctgtgttac 121 aaaacttttt gatcccaggc tggtaaaaaa tgtaaacttt tagccaaaag aatagaaaca 181 gatgccaggc caataaccca ataatataga gctatgacgc tatcgatttt gacaaggcgg 241 gtgaattctt tcatagaact taacgtatca tcttccatac atagataaaa cggtagatag 301 ggaacaaact gcctcaagac gttcttaacc cagctcacgc atcgcttcta acggtgaact 361 ctcattccaa tggaaccttg ttcaagttca aatagattgg taaggtatag cgtttactat 421 cgaatgaaac tatgtgttcc accgctagtg tttgcttcta acattccact tgcattataa 481 ctgtatggac gtaacctcca ggcaaagaaa atgaccggtc aaaacggaat cagttaacta 541 tggatagctg atactagcaa tttatcatta ctcaagtcag catagtctat atgaaggttt 601 ctattgaaaa cacacttccc ttctcgccat ttatttttga tagcggttaa cctttccttt 661 tccttacgta ctctagctat gaacacaatt atccatcgtc taacttagcc atatacttga 721 aacaggacat aatttgttca cattattctg agtagaatag gaactcaata aataaccaaa 781 caatttctac aaaatgccag tataataaag taatttgatc tgaatgaggt aaagtaatat 841 atgatattcc aaataaagaa tatgaccatt cactatttgt atcataaact tcaattattc 901 ttataaagta tgttaataga aataataaac caactataac atgtgtaaaa tgtaaaccag 961 taacacaata aaataatgaa cctaatatag catcatttat acaatactct aagtgtaagt 1021 attctgtagt ttgtagtgat gcaaaacatt caccgattaa gaatataata caaacaatgc 1081 ttgatatttc aaaactcatt cctttttcta ttagaaattg aacacatgca gtcatacaag 1141 atgcacttgc taaaataaat gtaatagtta aaattaacat tctagatgat gttaaaatta 1201 taccttcatt agataaagga taaggagata atgaaaagtg taaaataccc cagaaatatg 1261 taataaataa taatgcttct gaaacaatta tagctaaaat accagatgct aatgatgaaa 1321 atgtagaata taaactttct cttatagagt aaacaaatat taataataaa ataggattaa 1381 atgagaataa aattcctaca gaaaaatatt ttaaagatgt tgcatataat gatgttaatg 1441 aagaatatga tactaaatgt gcttttatat tactataaac tctaaatata aagaatatta 1501 tttataagaa cggttttatt tgtgtgccgt aaacatataa cggtaaaaag gttcgccggg 1561 gataacaggt tatagtatat atggagctct aatccttata tactattggc acctccatgt 1621 cgtctcatcg cagccttgca ataaaaaata aatagcgtgt attgttgcct tgcacacacc 1681 gctcgtcacg caagaattat tcaatttaga tgaagaactc caggcgttaa cctgttgagt 1741 tgagatggaa acagccggaa aggaaatatt acgcccaaac gataagatca tatatgaaat 1801 atactagcat gggactaaaa aatgttatgc tgttggttta agcccttttt taccatacaa 1861 gagatcgcgt actttggacc gaaaaaagct gtgaggaaac taaattaaag gaactcgact 1921 ggcctacata acaagaacga acgcttttaa cgcctgacat ggatggataa tactcggctt 1981 ttccaaggta taaccgctgt cgctgggact gtatggatcg aatcttactc attcatatcc 2041 aagcctcaat tattttttat tgttttacaa agatatgctc ttattacaaa ttgtaatcat 2101 aaaactctgg gtttatacta tttatggttt tcatttctat ttggtacata tggtttctta 2161 ttatctgtta taatacgtac agaattatat tcctcatcat taagaataat tgctcaagag 2221 aatgttaatt tttataatat gatttttaca attcacggta ttattatgat attctttaat 2281 ataatgcctg gattattcgg tggttttggt aattactttt taccaatact atgtggttct 2341 tctgaactag cttaccctag aataaatagt atatctttat tattacaacc tgtagcattt 2401 ggactagtta tattatcaac agcagcagaa tttggaggtg gtactggatg gaccttatac 2461 ccacctttaa gtacatcttt aatgtcccta tctcctgtag ctgtagatgt tattataata 2521 ggtcttttag tatctggtgt agcaagtata atgtcttcta taaatttcct taccacagta 2581 gtacacttac gtgctaaagg attaacactt ggtatattaa gtgtatctac atggtcaata 2641 cttttaacag ctattatgtt attactaaca ttacctgtat taactggtgg agtattaatg 2701 ttattatcag atttacactt taatacttta ttctatgatc ctacattttc tggagatcct 2761 gttttatatc aacatttatt ctggtttttt ggtcatcccg aagtatatat tttaatatta 2821 ccagcttttg gtgttattag tcatgtaata tctactaatt attgtagaag tttatttgga 2881 aatcaatcta tgatattagc tatggcttgt atagctgtat taggaagtat agtatgggct 2941 catcatatgt atacaactgg tttagaaatt gatactagag cttattttac ttctacaact 3001 attttaatat ctattccaac tggtacaaaa gtatttaact ggttatgtac atatatgagt 3061 agtaattttg gaataacaca taattcatct ttattagcat tattatttgt atgtacattc 3121 acttttggtg gtactacagg agtaatacta ggaaatgctg ctatagacat agctttacac 3181 gatacatact atgtaatagc tcatttccat tttgtattat ctattggagc tataattgga 3241 ttatttacaa cagtaagtgc ttttcaagaa aattattttg gtaaaccttt acgtgaaaat 3301 acaataattg tattatggat aatgttattc ttcgtaggag taatttttac attcttacct 3361 atgcatttcc ttggatttaa tgtaatgcct agacgtattc ctgattatcc agacgcttta 3421 aatggttgga atatgatctg ttctttagga tcaacaatga ctttatttgg tttattaatt 3481 tttaaataag attaaattca ttttttgttt atattaatta taattctata aatttagcta 3541 aagcacattt aataaattac ccatgtccat taaatattaa ttttttatgg aattatggat 3601 tcctattagg aatagtattt tttattcaaa ttttaactgg tgtattatta gcaacttgtt 3661 atactccaga aatttcttat gcatattata gtgtacaaca tatattaaga gaattatgga 3721 gtggatggtg ttttagatat atgcacgcta ctggtgctac atttgtattt attctaactt 3781 acttacatat tttaagagga ttaaattatt catactcata tttaccttta tcatggataa 3841 ctggattaat aatattttta atttctattg ttactgcttt tatgggttat gtattacctt 3901 ggggtcaaat gagtttctgg ggtgcaaccg ttattactaa tttattatat ttcatacctg 3961 gacttgtttc atggatctgt ggaggatata caattagtga tccaacttta aaaagatttt 4021 ttgtattaca ttttattttc ccatttatag ctctatgtat tgtattcata catatattct 4081 tcttacactt acaaggtagc tctaatcctt taggatatga tacagcttta aaaatacctt 4141 tctatccaag tctattatgt ctagatatta aagggtttaa taatgtatta gtcctatttt 4201 tagcacaaag tttatttggt attctaccat tagctcatcc tgataatgca attgtagtag 4261 atagatatgt tactcctcta catattgttc cagaatggta ttttctacct ttctatgcta 4321 tgttaaaaac aattcctaat aaaacagctg gtttattagt tatgatagca tcattacaat 4381 tattattctt actagcagaa caaagaaatc taacatcact tatacaattt aaatttgctt 4441 ttggtgcaag agaatattct gttcctacaa tctggtttat atgttcattc tatgctttat 4501 tatggattgg atgtcaatta ccacaatcta ttttcatttt atatggtcgt ttatttatta 4561 tattattctt ttttagtggg ttttttacac ttgttcaatc aagaagagta cattatgatt 4621 acagctcaca agcaaacata aatattacaa ggctgcgatg agacgacatt tctgagtatt 4681 gagcggaaca aaacagaccg taaggttata attatgaaat atagttacca tagctgttga 4741 tggatgcttc gatcataaat ttttgaagta tcaatcgagt taacatgctc agccgccaaa 4801 aacgatatta ttaccgtaca agctgttagc aagacatggc tgggagttgg caagtcaaag 4861 aagttctggt ttataataga tacgttatta aagttaagat gtatgggata attgtagtac 4921 accttgattg gtttaacttt tattggtaca tagaagtact tatatgttcg gtattgcatg 4981 cctggtgttt ttaataagac gctaacttcc tggataaact tcccaatgat atatcttcca 5041 aatagatttc gcagaaaacc gtctatattc atgtttgttt gacctttaac cactaattac 5101 gaatcttcca agaatatttc aagagtccaa ggttcggtct attattttcc tgttctgtaa 5161 ttagatcaca tgctttatag ttcatggagc catggctata aaccactatt catagagaca 5221 acttgtggca tctctctcga tttccagatg ttgagttact aagaggattc tctccacact 5281 tcaattcgta cttccactac caaaatattc tctcctgttc caacattcta gggtttttcg 5341 cgttttttca ggagaaatcc gtatatcgat gtctttaaaa actacgctat tggattcaac 5401 gtccaggact tcctgacgct tagtaacgat ttctacttcc agcagccatt ttggttcagc 5461 tactagttca ctgtcaacta ccatgttacg acttcgcacc gactgtttct tttacctcac 5521 gagtcgatta tcaaggtttg atcctttaat ctcgtaacca tgccaacaca taagaacttt 5581 tagggaagtt aaggtgctca gggtcttacc gtcgggccgt agtgttccac atattcatgg 5641 ataattctat ttattaggag tctcaaacta gcgacaatgg ggaagtcgtt acaccattca 5701 tgcaggtcgg agattacccg acaaggaatt tcgctacctt aggaccgttt acgatacagc 5761 cgccgtttat cattaatgcc gggcagatgt cagtaacttg aactcttcat cggagttatc 5821 agtgacttgt gttgtaacct tacagacgct tccagattat taacttctta taaatgatag 5881 cgccgatttc ctgggtatcc aatccagtgc tccatttaag gcatagagac tcagcctgtg 5941 ttcaactttg tagggtatta tttataatat // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Dec 8 2004 11:02:33