LOCUS AY722799 5977 bp DNA circular INV 12-JUL-2005 DEFINITION Plasmodium fragile mitochondrion, complete genome. ACCESSION AY722799 VERSION AY722799.1 GI:57547688 KEYWORDS . SOURCE mitochondrion Plasmodium fragile ORGANISM Plasmodium fragile Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5977) AUTHORS Jongwutiwes,S., Putaporntip,C., Iwasaki,T., Ferreira,M.U., Kanbara,H. and Hughes,A.L. TITLE Mitochondrial Genome Sequences Support Ancient Population Expansion in Plasmodium vivax JOURNAL Mol. Biol. Evol. 22 (8), 1733-1739 (2005) PUBMED 15901839 REFERENCE 2 (bases 1 to 5977) AUTHORS Jongwutiwes,S. and Putaporntip,C. TITLE Direct Submission JOURNAL Submitted (13-AUG-2004) Parasitology, Faculty of Medicine, Chulalongkorn University, Rama4, Pathumwan, Bangkok 10330, Thailand FEATURES Location/Qualifiers source 1..5977 /organism="Plasmodium fragile" /organelle="mitochondrion" /mol_type="genomic DNA" /db_xref="taxon:5857" /note="type strain of Plasmodium fragile" gene complement(1987..>2736) /gene="cox3" CDS complement(1987..>2736) /gene="cox3" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 3" /protein_id="AAW52537.1" /db_xref="GI:57547689" /translation="FIFSNYNNIKAHLISYPSLTSLYGTSLKYFSVGILFTFNPIMLI IFVYSIRESFYSIFSSLVSGMLSIIISEALLFITYFWGILHFSLSPYPLYNEGIILTS SRMLILTITFILASASCMTACLQFLIEKGMSLEISSIIFIIYLLGECFASLQTTEYLH LGYCINDAISGTLFYCVTGLHFSHVIVGLLLLLIYFIRIVEVYDTNCEWSYSLYGISY IVLPHTDQITILYWHFVEIVWLFIEFFFYSE" gene <3315..4748 /gene="cox1" CDS <3315..4748 /gene="cox1" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 1" /protein_id="AAW52538.1" /db_xref="GI:57547690" /translation="FFVLNRYTLITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTEL YSSSLRVIAQENVNLYNMIFTLHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFILVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIVGLLVS GIASIMSSLNFITTVMHLRSKGLTFGILSVSTWSLIITSVMLLLTLPVLTGGVLMLLS DLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRSLFGN QSMILAMSCIAILGSVVWAHHMYTTGLEVDTRAFFTSTTILISIPTGTKIFNWICTYM GSNFGITHSSSLLSLLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIALFTLVSSFQENFFGKHLRENSIIILWSILFFIGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGLFIFK" gene 4770..5900 /gene="cytb" CDS 4770..5900 /gene="cytb" /codon_start=1 /transl_table=4 /product="cytochrome B" /protein_id="AAW52539.1" /db_xref="GI:57547691" /translation="MNYYSINLAKAHLLNYPCPLNINFLWNYGFLLGIIFFIQILTGV FLASRYTPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYL YLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSSIPVLVIWLCGGYT VSDPTIKRFFVLHFILPFVALCIVFIHIFFLHLHGSTNPLGYDTALKIPFYPNLLSLD VKGFNNIFILFLLQSIFGIIPLSHPDNAILVNTYVTPIQIVPEWYFLPFYAMLKTIPS KTAGLLIVLASLQLLFLLAEQRSLTTIIQFKMTFGAREYSVPMIWFMCSFYALLWIGC QLPQDIFILYGRLFIILFFSSGLFTLVHYKRTHYDYSSQANI" ORIGIN 1 aagttaggat aatatttatt atagttacca tagctgtaga tggatgcttc gatatgttat 61 atttaagtat caatcgagat tacatgctca gccgccaaaa atataacgat attattaccg 121 tacaagccgt tagcaagaca tgatagggag ttgacaagtt aaagaagttc tggtttataa 181 tagatacgtt ttaaaagtta ggatgtatgg gataattgta gtacacctta attggtttta 241 ctatatttgg tttatagata ttatgttcgg tattgcatgc ctggtgttaa tatttaagac 301 gctgacttcc tggctaaact tcccaatgat atatcttcca aatagatttc gcagaaaacc 361 gtctatattc atgtttgttt gacctttaac cactaattac gaatcttcca agaatatttc 421 aagagtccaa ggttcggtct attattttcc tgttctgtaa ttagatcaca tgttttatag 481 ttcatggaga tatgactata ccactattca tagagacaac ttatggcatc tctctcgatt 541 tccagatgtt gagttactaa gaggattctc tccacacttc aattcgtact tccactacca 601 aaatatattc tcctgttcta atgttctagg gtttttcgcg ttttttcagg agaaatccgc 661 atatcgatgt gtttaaattc tacgctattg gattcaacgt ccaggacttc ctgacgttta 721 ataacgattt ctacttccag cagccatttt ggttcagcta caagttcact gtcaactacc 781 atgttacgac ttcgcaccga ctgttttctt ttacctcacg agtcgatcag gaaggtttca 841 tccttaaatc tcgtaaccat gccaacacat aagaactttt tagggaagtt aaggtgctca 901 gggtcttacc gtcgggccgt atgattccac atattcatgg ataattctat ttattaggag 961 tctcacacta gcgacaatgg ggaagtcgtt acaccgttca tgcaggacgg agattacccg 1021 acaaggaatt ttgctacctt aggaccgttt acgatacagc cgccgtttat cattgatgcc 1081 gggcagatgt cagtaacttg aactattcat cggaattatc agtgacttgt gttgtaacct 1141 tacagacgct tccagaatat aacttcttat aaatggtagc gccggtttcc cgggtatcca 1201 atccagtgct ccattcaagg catagagact cagcctgtgt tcaactttgt aggatataaa 1261 tatagctttt ggtatctcgt aatgtagaat aataatgggt tgaccgtcaa atccttttca 1321 ttaaaagagt ggattaatgc ccagccaaca ccatccaatt tgattgggaa taatctgtgt 1381 tacaatactt tttgatccca ggctggtaat aaatgtaaac ttttagctca aaagaataga 1441 aacagatgcc aggccaaaaa ccaaaataga gctatgacgc tatcattata acaaggcaga 1501 taaattcttt catagaactt aacgtttcat cttccataca taaataaaac ggtagatagg 1561 gaacaaactg cctcaagacg ttcttaaccc agctcacgca tcgcttctaa cggtgaactc 1621 tcattccaat ggaaccttgt tcaagttcaa atagattggt aaggtataac gtttactatc 1681 gaatgaaaca atgtattcca ccgctagtgt ttgcttctaa cattccactt gcttataact 1741 gtatggacgt aacctccagg caaagaaaat gaccggtcaa aacggaatca gttaactatg 1801 gatagctgat actaacaatt tatcattact caagtcagca tagtctatat gaaggtttct 1861 atggaaacac acttcccttc tcgccatttg atagcggtta acctttcttt ttccttacgt 1921 actctagctt ttatcacaat aaattatcta tactagaaac tatagatgaa acaggacata 1981 tattcattat tctgaataga agaagaactc tataaataac catacaattt caacaaaatg 2041 ccaatataat attgtaattt gatcagtatg aggtaataca atataagata taccatataa 2101 tgaatatgac cattcacaat ttgtatcata aacttctact attcttataa aatatattaa 2161 taataataat aaaccaacta taacatgtga aaaatgtaaa cctgtaacac aataaaataa 2221 tgtaccagat atagcatcat ttatacaata tcctaaatgt aaatattcgg ttgtttgaag 2281 tgatgcaaaa cattctccaa gtaagtatat tataaatata atactagaaa tttctaaact 2341 cattcctttt tctattagaa attgtaaaca tgctgtcata catgatgcac ttgctaaaat 2401 aaatgtaata gttaaaatta acattcttga tgatgttaaa attatacctt cattatataa 2461 cggatatgga gataaactaa aatgtaaaat accccaaaaa tatgtaataa ataataatgc 2521 ttcagatatt attatagata acattcctga tactaatgaa gaaaatatag aataaaaact 2581 ttctctaatt gaatatacaa atattattaa cataatagga ttgaatgtaa ataaaatacc 2641 aacagaaaaa tattttaaag atgttccata taatgatgtt aatgaaggat aagatattaa 2701 atgtgcttta atattattat agttactaaa tataaaaaat atatttataa gaacggtgat 2761 tttgtgtgcc gttaacatat aacggtaaga aggttcgccg gggataacag gttatagtat 2821 atatagagct caaatcttta tatactattg gcacctccat gtcgtctcat cgcagccttg 2881 caataaataa atacgattta gcgtgtattg ttgccttgta cacaccgctc gtcacgcaaa 2941 tttatatgat taagataaag aactccaggc gttaacctgt agagttgaga tggaaacagc 3001 cggaaaggta atattacgtc caaatgataa gattacatat gaaatatatt agcatgggac 3061 taaaaaatgt tatgttgttg gtttaagccc tttttaccat acaagagatc gcgtactttg 3121 gactgaaaat agctgtgaga aaactacatt aaaggaactc gactggccta caatataaga 3181 acgaacgctt ttaacgcctg acatggatgg ataatactcg acttttccaa agtataaccg 3241 ctgtcgctgg gactgtatgg atcaaatctt acttattcat atccaagcct catttattat 3301 taattatata tatttttttt gttttaaata gatatacact tattacaaat tgcaatcata 3361 aaactttagg tctatactat ttatggtttt catttttatt tggtagttac ggttttttat 3421 tatctgttat tttacgtaca gaattatatt cttcttcttt aagagttatc gcacaagaaa 3481 atgttaattt atacaatatg attttcacat tacacggaat tattatgata ttctttaata 3541 tcatgccagg attatttgga ggattcggta actatttttt accaatttta tgtggttctc 3601 cagaacttgc atatcctaga attaatagta tatctttatt attacaacca atagctttta 3661 tattagtaat tctatctaca gcagcagaat ttggaggagg tactggatgg actttatatc 3721 caccattaag tacatcactt atgtctttat ctcctgttgc agtagatgta atcattgttg 3781 gtcttttagt atctggtatt gctagtatta tgtcctcttt aaattttatt actacagtaa 3841 tgcatttaag atctaaaggt ttaacatttg gaatattaag tgtatctaca tggtcattaa 3901 taataacatc tgtaatgtta ttattaacat tacctgtatt aacaggtggt gttttaatgt 3961 tattatcaga tttacatttt aatacattat tttttgatcc tacatttgct ggagatccta 4021 ttttatatca acatctattt tggttttttg gacatcctga agtatacatt ttaatattac 4081 cagcatttgg tgttattagt catgtaatat ctacaaatta ttgtagaagt ttatttggta 4141 atcaatctat gattttagca atgagttgta ttgctatatt aggaagtgtt gtgtgggctc 4201 atcacatgta tactacaggt ttagaagtag atacaagagc attttttaca tctacaacta 4261 tattaatatc tatacctact ggaacaaaaa tatttaattg gatatgtaca tatatgggta 4321 gtaattttgg tataactcat agttcatctt tattatcatt actatttata tgtacattta 4381 cttttggtgg tactacagga gtaatattag gtaatgcagc tattgatatt gcattacatg 4441 acacttatta tgtcattgct cacttccatt ttgtattatc tataggtgca attattgcat 4501 tgtttacatt agtaagtagt tttcaagaaa acttttttgg taaacattta cgtgaaaatt 4561 ctataattat attatggtca atcttatttt ttattggagt tgttttaaca tttttaccta 4621 tgcattttct tggatttaat gtaatgccta gacgtattcc tgattatcca gacgctttaa 4681 atggatggaa tatgatttgt tctattggat caacaatgac tttatttggt ttatttattt 4741 ttaaataata taaaatattt tttgtttata tgaattatta ttctattaat ttagcaaaag 4801 cacatttatt aaattaccca tgcccattaa acattaattt cttatggaat tatggatttc 4861 ttttaggaat tatatttttt atacaaatat taacaggtgt atttttagct agtcgttata 4921 ctccagaaat atcttatgca tattatagta tacaacatat tttaagagaa ttatggagtg 4981 gatggtgttt tagatatatg catgctacag gtgcatctct tgtattctta ttaacttatt 5041 tacatatttt aagaggatta aattattcat atttatattt acctttatca tggatatcag 5101 gattaataat atttgcatta tttatcgtta cagcttttat aggttatgtt ttaccttggg 5161 gacaaatgag ttattggggt gcaactgtta ttactaactt attatcttca attccagtat 5221 tagtcatttg gttatgtgga ggatatacag taagtgatcc tacaataaaa agattttttg 5281 tattacattt tatacttcct tttgtagcat tatgtattgt atttatacat atattctttt 5341 tacacttaca tggtagcact aatcctttag ggtatgatac agctttaaaa atacccttct 5401 atccaaatct attaagtctt gatgtaaaag gatttaataa tatatttata ttatttttat 5461 tacaaagtat ttttggtata attccattat ctcatccaga taatgctata ttagttaata 5521 catatgttac accaattcaa attgttcctg aatggtactt tttaccattt tatgcaatgt 5581 taaaaacaat acctagtaaa accgcaggtt tattaattgt tttagcatct ttacaactat 5641 tatttttatt agcagaacaa agaagtttaa ctactataat acaatttaaa atgacatttg 5701 gtgctagaga atattctgta ccaatgatat ggtttatgtg ttcattctat gctttattat 5761 ggattggatg tcaattacca caagatattt tcattttata tggtcgttta tttataatat 5821 tattcttctc tagtggatta tttacacttg ttcattataa aagaacacat tatgattaca 5881 gctcccaagc aaacatttaa attacaaggc tacgataaga cgatatctct gaatattgag 5941 cagaacaata cagaccgtaa ggttataatt atgttaa // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Aug 17 2005 15:39:53