LOCUS AY722797 5957 bp DNA circular INV 12-JUL-2005 DEFINITION Plasmodium knowlesi isolate Malayan MRA-487 mitochondrion, complete genome. ACCESSION AY722797 VERSION AY722797.1 GI:57547680 KEYWORDS . SOURCE mitochondrion Plasmodium knowlesi ORGANISM Plasmodium knowlesi Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5957) AUTHORS Jongwutiwes,S., Putaporntip,C., Iwasaki,T., Ferreira,M.U., Kanbara,H. and Hughes,A.L. TITLE Mitochondrial Genome Sequences Support Ancient Population Expansion in Plasmodium vivax JOURNAL Mol. Biol. Evol. 22 (8), 1733-1739 (2005) PUBMED 15901839 REFERENCE 2 (bases 1 to 5957) AUTHORS Jongwutiwes,S. and Putaporntip,C. TITLE Direct Submission JOURNAL Submitted (13-AUG-2004) Parasitology, Faculty of Medicine, Chulalongkorn University, Rama4, Pathumwan, Bangkok 10330, Thailand FEATURES Location/Qualifiers source 1..5957 /organism="Plasmodium knowlesi" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="Malayan MRA-487" /db_xref="taxon:5850" gene complement(1987..>2736) /gene="cox3" CDS complement(1987..>2736) /gene="cox3" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 3" /protein_id="AAW52531.1" /db_xref="GI:57547681" /translation="FIFSNYNNIKAHLVSYPSLTSLYGTSLKYFSVGILFTFNPIIFI IFVYSIRESFYSVFSSLVSGMLSIIISEALLFITYFWGILHFSLSPYPLYSEGIIFTS SRMLILTITFILASASCMTACLQFLIEKGMSLEISSIIFIIYLLGECFASLQTTEYLH LGYCINDAISGTLFYCVTGLHFSHVIVGLLLLLIYFIRIIEVYDTNCEWSYSLYGISY ILLPHTDQITILYWHFVEIVWLFIEFFFYSE" gene <3298..4731 /gene="cox1" CDS <3298..4731 /gene="cox1" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 1" /protein_id="AAW52532.1" /db_xref="GI:57547682" /translation="LFFFNRYTLITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTEL YSSSLRIIAQENVNLYNMIFTLHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFILVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIIGLLVS GIASIMSSLNFITTVMHLRSKGLTLGILSVSTWSLIITSVMLLLTLPVLTGGVLMLLS DLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRSLFGN QSMILAMSCIAILGSVVWAHHMYTTGLEVDTRAFFTSTTILISIPTGTKIFNWICTYM GSNFGITHSSSLLSLLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIGLFTLVSSFQENFFGKHLRENSIIILWSILFFIGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGFLIFK" gene 4750..5880 /gene="cytb" CDS 4750..5880 /gene="cytb" /codon_start=1 /transl_table=4 /product="cytochrome B" /protein_id="AAW52533.1" /db_xref="GI:57547683" /translation="MNYYSINLAKAHLLNYPCPLNINFLWNYGFLLGIIFFIQILTGV FLASRYTPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYL YLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSSIPVLVIWLCGGYT VSDPTIKRFFVLHFILPFVALCIVFIHIFFLHLHGSTNPLGYDTALKIPFYPNLLSLD VKGFNNIFILFLLQSIFGIIPLSHPDNAILVNTYVTPIQIVPEWYFLPFYAMLKTIPS KTAGLLIVLASLQLLFLLAEQRSLTTIIQFKMTFGAREYSVPMIWFMCSFYALLWIGC QLPQDIFILYGRLFIILFFFSGLFTLVHYKRTHYDYSSQANI" ORIGIN 1 aagttaggat aataaaataa tagttaccat agctgtagat ggatgcttcg atatatatta 61 tatttaagta ttaatcgaga ttacatgctc agccgccaaa aataaaacga tattattacc 121 gtacaagccg ttagcaagac atgataggga gttgacaagt taaagaagtt ctggtttata 181 atagatacgt tataaaagtt aggatgtatg ggataattgt agtacacctt aattggttta 241 acaatatttg gtttatagat attatgttcg gtattgcatg cctggtgttt ttaaattaag 301 acgctgactt cctggctaaa cttcccaatg atatatcttc caaatagatt tcgtagaaaa 361 ccgtctatat tcatgtttga ttgaccttta accgctaatt acgaatcttc caagaatatt 421 tcaagagtcc aaggttcggt ctattatttt cctgttctgt aattagatca catgttttat 481 agttcatgga gatatgacta taccactatt catagagaca acttatggca tctctctcga 541 tttccagttg ttgagttact aagaggattc tctccacact tcaattcgta cttccactac 601 cagaatataa tcacctgtta taatgttcta ggttttttcg cgttttttca ggagaaatcc 661 gtatatcgat gtttttaaaa tctacgctat tggattcaac gtccaggact tcctgacgtt 721 taataacgat ttctacttcc agcagccatt ttggttcagc tacaagttca ctgtcaacta 781 ccatgttacg acttcgcacc gactgttttc ttttacctta cgagtcgatc aggaaggttt 841 catccttaaa tctcgtaacc atgccaacac ataagaactt tttagggaag ttaaggtgct 901 cagggtctta ccgtcgggcc gtatgattcc acatattcat ggataattct atttattagg 961 agtctcacac tagcgacaat ggggaagtcg ttacaccgtt catgcaggac ggagattacc 1021 cgacaaggaa ttttgctacc ttaggaccgt ttacgataca gccgccgttt atcattgatg 1081 ccgggcagat gtcagtaact tgaattattc atcagaatta tcagtgactt gtgttgtaac 1141 cttacagacg cttccagaat ataacttctt ataaatggta gcgccggttt cccgggtatc 1201 caatccagtg ctccattcaa ggcatagaga ctcagcctgt gttcaacttt gtaggattta 1261 tagcttttgg tatctcgtaa tgtagaacaa taatgggttg accgtcaaat ccttttcatt 1321 aaaagagtgg attaatgccc agccaacacc atccaatttg attgggaata atctgtgtta 1381 caatactttt tgatcccagg ctggtaaaaa atgtaaactt ttagcccgaa agaatagaaa 1441 cagatgccag gccaaaaacc caaaaataga gctatgacgc tatcatttta acaagttaga 1501 taaattcttt catagaactt aacgtttcat cttccataca taaataaaac ggtagatagg 1561 gaacaaactg cctcaagacg ttcttaaccc agctcacgca tcgcttctaa cggtgaactc 1621 tcattccaat ggaaccttgt tcaagttcaa atagattggt aaggtatagc gtttactatc 1681 gaatgaaaca atgtattcca ccgctagtgt ttgcttctaa cattccactt gcttataact 1741 gtatggacgt aacctccagg caaagaaaat gaccggtcaa aacggaatca attaactatg 1801 gatagctgat actaacaatt tatcattact caagtcagca tagtctatat gaaggtttct 1861 atggaaacac acttcccttc tcgccatttg atagcggtta acctttcttt tccttacgta 1921 ctctagcttt ttacacaact taattgtcta tactagatac tatggacgaa acaggacata 1981 tattcattat tctgaataga aaaagaactc tataaataac catacaattt caacaaaatg 2041 ccagtataat attgtaattt gatcagtatg aggtaataat atataagata taccatataa 2101 tgaatatgac cattcacaat tagtatcgta aacttctatt attcttataa aatatattaa 2161 taataataat aaaccaacta taacatgtga aaaatgtaaa cctgtaacac aataaaataa 2221 tgtacctgat atagcatcat ttatacaata tcctaaatgt aagtattcag ttgtttgaag 2281 tgatgcaaaa cattctccaa gtaagtatat tataaatata atactagaaa tttctaaact 2341 cattcctttt tctattagaa attgtaaaca tgctgtcata catgatgcac ttgctaaaat 2401 aaatgtaata gttaaaatta acattcttga tgatgtgaaa atgattcctt cactatataa 2461 tggatatgga gataaactaa aatgtaaaat accccagaag tatgtaataa ataataatgc 2521 ttcagatata attatagata acattcctga tactaatgat gaaaatacag aataaaaact 2581 ttctctaata gaatatacaa atattataaa aataatagga ttgaatgtaa ataaaatacc 2641 aacagaaaaa tattttaaag atgttccata taaagatgtt aatgaaggat aagatactaa 2701 atgtgctttt atattattat agttactaaa tataaaaaat atatttataa gaacggtaat 2761 tttgtgtgcc gttaacatat aacggtaaga aggttcgccg gggataacag gttatagtat 2821 atatagagct caaatcttta tatactattg gcacctccat gtcgtctcat cgcagccttg 2881 caataaataa atattattta gcgtgtattg ttgccttgta cacaccgctc gtcacgcaaa 2941 tttatatcac taagataaag aactccaggc gttaacctgt agagttgaga tggaaacagc 3001 cggaaaggta tcattacgtc caaactataa gaatatatga aatatactag catgggacaa 3061 aaaaatatta tgttgttggt ttaagccctt ttaccataca agagatcgcg tactttggac 3121 tgaaaaaagc tgtgaggaaa ctacattaaa ggaactcgac tggcctacaa tataagaacg 3181 aacgctttta acgcctgaca tggatggata atactcgact tttccaaagt ataaccgctg 3241 tcgctgggac tgtatggatc gaatcttact tattcatatc caagcctcat ttatgattta 3301 ttttttttta atagatatac acttattaca aattgcaatc ataaaacttt aggtttatac 3361 tatttatggt tttcattttt atttggtagt tatggatttt tattatctgt tattttacgt 3421 acagaattat attcttcttc tttaagaata attgcacaag aaaatgttaa tttatacaat 3481 atgatattta cattacatgg aataattatg atatttttta atataatgcc aggattattt 3541 ggaggattcg gtaattattt tctaccaatt ttatgcggtt ctccagaact tgcatatcca 3601 agaattaata gtatatcttt attattacaa ccaatagctt ttatattagt cattttatct 3661 acagcagcag aatttggagg aggtactgga tggactttat atccaccatt gagtacatca 3721 cttatgtctt tatctcctgt tgcagtagat gtaatcatta ttggtctttt agtgtctggt 3781 attgctagta ttatgtcttc tttaaatttt attactactg taatgcattt aagatctaaa 3841 ggtttaacac ttggtatact aagtgtatct acatggtcat taataattac atctgtaatg 3901 ttattattga cattacctgt attaacaggt ggtgttttaa tgttattatc agatttacat 3961 tttaatacat tattttttga tcctacattt gctggagatc ctattctata tcaacatcta 4021 ttctggttct ttggacatcc tgaagtatat attttaatat taccagcatt tggagttatt 4081 agtcatgtaa tatctacaaa ttattgtaga agcttattcg gtaatcaatc tatgatttta 4141 gcaatgagtt gtattgctat attaggaagt gttgtatggg ctcatcatat gtatactaca 4201 ggtttagaag tagatacaag agcatttttt acatctacaa ctatattaat atctatacct 4261 actggaacaa aaatatttaa ttggatatgt acatacatgg gtagtaattt tggtataact 4321 catagttcat ctttattatc attactattt atatgtacat ttacttttgg tggtactaca 4381 ggagtaatat taggaaatgc agctattgat attgcattac atgatactta ttatgtaatt 4441 gctcattttc actttgtatt atctataggt gcaataattg gattgtttac attagtaagt 4501 agttttcaag aaaacttttt tggtaaacat ttacgtgaaa attctataat tatactatgg 4561 tcaatcttat tttttattgg agttgtttta acattcttac ctatgcattt tcttggattt 4621 aatgtaatgc ctagacgtat tcctgattat ccagacgctt taaatggatg gaatatgatt 4681 tgttcaattg gatcaactat gactttattt gggtttttaa tttttaaata atataaattt 4741 tttgtttata tgaattatta ttctattaat ttagctaaag cacatttatt aaattaccca 4801 tgcccattaa atattaattt cttatggaat tatggatttc ttttaggtat tatattcttt 4861 atacaaatat taacaggtgt atttttagct agtcgttata ctccagaaat ttcttacgca 4921 tactacagta tacaacatat tttaagagaa ttatggagtg gatggtgttt tagatatatg 4981 catgctacag gtgcatctct tgtattttta ttaacttatt tacatatttt aagaggatta 5041 aattactcat atttatatct accattatca tggatatcag gattaatcat atttgcatta 5101 tttatagtta cagcttttat aggttatgtt ttaccttggg gacaaatgag ttattggggt 5161 gcaactgtca taactaattt attatcttca attccagtat tagtcatttg gttatgtgga 5221 ggatatacag taagtgatcc aacaattaaa agattttttg tattacattt tatacttcct 5281 tttgtagcat tatgtattgt atttatacat atattctttt tacatttaca tggtagcact 5341 aatcctttag ggtatgatac agctttaaaa atacccttct atccaaatct attaagtctt 5401 gatgtaaaag gatttaataa tatatttata ttattcttat tacaaagtat ttttggtata 5461 attccattat ctcatccaga taatgctata ttagttaata catatgttac accaattcaa 5521 attgttcctg aatggtactt tttaccattt tatgcaatgt taaaaacaat acctagtaaa 5581 acagcaggtt tattaattgt tttagcatct ttacaattat tatttttatt agctgaacaa 5641 agaagtttaa ctactataat acaatttaaa atgacatttg gtgctagaga atattcagta 5701 ccaatgatat ggtttatgtg ttcattctat gctttattat ggattggatg tcaattacca 5761 caagatattt tcattttata tggtcgttta tttataatat tattcttctt tagtggatta 5821 tttacacttg ttcattataa aagaacacat tatgattaca gctcccaagc aaacatttaa 5881 attacaagtc tacgataaga caatatctct gtacactgat tagaacaata cagaccgtaa 5941 ggttataatt atgttaa // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Aug 17 2005 15:39:53