LOCUS AY598101 5989 bp DNA linear INV 12-JUL-2005 DEFINITION Plasmodium vivax isolate IBM2 mitochondrion, complete genome. ACCESSION AY598101 VERSION AY598101.1 GI:63022346 KEYWORDS . SOURCE mitochondrion Plasmodium vivax (malaria parasite P. vivax) ORGANISM Plasmodium vivax Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5989) AUTHORS Jongwutiwes,S., Putaporntip,C., Iwasaki,T., Ferreira,M.U., Kanbara,H. and Hughes,A.L. TITLE Mitochondrial Genome Sequences Support Ancient Population Expansion in Plasmodium vivax JOURNAL Mol. Biol. Evol. 22 (8), 1733-1739 (2005) PUBMED 15901839 REFERENCE 2 (bases 1 to 5989) AUTHORS Jongwutiwes,S. TITLE Direct Submission JOURNAL Submitted (13-APR-2004) Parasitology, Faculty of Medicine, Chulalongkorn University, Rama 4, Pathumwan, Bangkok 10330, Thailand FEATURES Location/Qualifiers source 1..5989 /organism="Plasmodium vivax" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="IBM2" /db_xref="taxon:5855" /country="Indonesia" gene complement(1998..2789) /gene="cox3" CDS complement(1998..2789) /gene="cox3" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 3" /protein_id="AAY26774.1" /db_xref="GI:63022347" /translation="MLTAHKITVLINIFFIFSNYNNIKAHLVSYPSLTSLYGTSLKYF SVGILFTFNPIIFIIFVYSIRESFYSIFSSLVSGMLSIIISEAILFITYFWGILHFSL SPYPLYNEGIILTSSRMLILTITFILASASCMTACLQFLIEKGMSLEISSIVFIIYLL GECFASLQTTEYLHLGYCINDAISGTLFYCVTGLHFSHVIVGLLLLLIYFIRIVEMYD TNSEWSYSLYGISYIVLPHTDQITILYWHFVEIIWLFIEFFFYSE" gene <3327..4760 /gene="cox1" CDS <3327..4760 /gene="cox1" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 1" /protein_id="AAY26775.1" /db_xref="GI:63022348" /translation="FFVFNRYTLITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTEL YSSSLRIIAQENVNLYNMIFTLHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFILVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIVGLLVS GIASIMSSLNFITTVMHLRSKGLTLGILSVSTWSLIITSVMLLLTLPVLTGGVLMLLS DLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRSLFGN QSMILAMSCIAILGSVVWAHHMYTTGLEVDTRAFFTSTTILISIPTGTKIFNWICTYM GSNFGITHSSSLLSLLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIALFTLVSSFQENFFGKHLRENSIIILWSILFFIGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGLFIFK" gene 4782..5912 /gene="cytb" CDS 4782..5912 /gene="cytb" /codon_start=1 /transl_table=4 /product="cytochrome b" /protein_id="AAY26776.1" /db_xref="GI:63022349" /translation="MNYYSINLAKAHLLNYPCPLNINFLWNYGFLLGIIFFIQILTGV FLASRYTPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYL YLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSSIPVLVIWLCGGYT VSDPTIKRFFVLHFILPFVALCIVFIHIFFLHLHGSTNPLGYDTALKIPFYPNLLSLD VKGFNNIFILFLLQSIFGIIPLSHPDNAILVNTYVTPIQIVPEWYFLPFYAMLKTIPS KTAGLLIVLASLQLLFLLAEQRSLTTIIQFKMTFGAREYSVPMIWFMCSFYALLWIGC QLPQDIFILYGRLFIISFFSSGLFALVHYKRTHYDYSSQANI" ORIGIN 1 aagttaggat aatgaaatta tagttaccat agctgtagat ggatgcttcg atatattata 61 tatttaagta ttaatcgaga ttacatgctc agccgccaaa aatataacga tattattacc 121 gtacaagccg ttagcaagac atgataggga gttgacaagt taaagaagtt ctggtttata 181 gtagatacgt ttttaaagtt aggatgtatg ggataattgt agtacacctt aattggtttc 241 actttatttg gtttatagat attatgttcg gtattgcatg cctggtgttt ttaattaaga 301 cgctgacttc ctggctaaac ttcccaatga tatatcttcc aaatagattt cgcagaaaac 361 cgtctatatt catgtttgat tgacctttaa ccgctaatta cgaatcttcc aagaatattt 421 caagagtcca aggttcggtc tataattttc ctgttctgta attagatcac atgttttata 481 gttcatggag atatgactat accactattc atagagacaa ctaatggcat ctctctcgat 541 ttccagatgt tgagttacta agaggattct ctccacactt caattcgtac ttccactacc 601 aaaatataat ctcctgttct aatgttctag ggtttttcgc gttttttcag gagaaatccg 661 tatatcgatg tttttaaaat ctacgctatt ggattcaacg tccaggactt cctgacgttt 721 aataacgatt tctacttcca gcagccattt tggttcagct acaagttcac tgtcaactac 781 catgttacga cttcgcaccg actgttttct tttacctcac gagtcgatca ggaaggtttc 841 atccttaaat ctcgtaacca tgccaacaca taagaacttt ttagggaagt taaggtgctc 901 agggtcttac cgtcgggccg tatgattcca catattcatg gataattcta tttattagga 961 gtctcacact agcgacaatg gggaagtcgt tacaccgttc atgcaggacg gagattaccc 1021 gacaaggaat tttgctacct taggaccgtt tacgatacag ccgccgttta tcattgatgc 1081 cgggcagatg tcagtaactt gaactattca tcggaattat cagtgacttg tgttgtaacc 1141 ttacagacgc ttccagaata taacttctta taaatggtag cgccggtttc ccgggtatcc 1201 aatccagtgc tccattcaag gcatagagac tcagcctgtg ttcaactttg taggatatat 1261 aatatagctt ttggtatctc gtaatgtaga acaataatgg gttgaccgtc aaatcctttt 1321 cattaaaaga gtggactaat gcccagccaa caccatccaa tttgattggg aattatctgt 1381 gttacaatac tttttgatcc caggctggta aaaaatgtaa acttttagcc caaaagaata 1441 gaaacagatg ccaggccaaa aacccaaaaa tagagctatg acgctatcaa tttgacaagg 1501 cagataaatt ctttcataga acttaacgtt tcatcctcca tacataaata aaacggtaga 1561 tagggaacaa actgcctcaa gacgttctta acccagctca cgcatcgctt ctaacggtga 1621 actctcattc caatggaacc ttgttcaagt tcaaatagat tggtaaggta tagcgtttac 1681 tatcgaatga aacaatgtat tccaccgcta gtgtttgctt ctaacattcc acttgcttat 1741 aactgtatgg acgtaacctc caggcaaaga aaatgaccgg tcaaaacgga atcagttaac 1801 tatggatagc tgatactaac aatttatcat tactcaagtc agcatagtct atatgaaggt 1861 ttctatggaa acacacttcc cttctcgcca tttgatagcg gttaaccttt ctttttcctt 1921 acgtactcta gcttttaaca caatattatt gtctatacta gatactatag ttgaaacagg 1981 acatatacat atattcatta ttctgaatag aaaaagaact ctataaataa ccatataatt 2041 tcaacaaaat gccagtataa tattgtaatt tgatcagtat gaggtaatac aatataagat 2101 ataccatata atgaatatga ccattcacta ttagtatcat acatttcaac tattcttata 2161 aaatatatta ataataataa taaaccaact ataacatgtg aaaaatgtaa acctgtaaca 2221 caataaaata atgtaccaga tatagcatca tttatacaat atcctaaatg taagtattca 2281 gttgtttgaa gtgatgcaaa acattctcca agtaagtata ttataaatac aatactagaa 2341 atttctaaac tcattccttt ttctattaga aattgtaaac atgctgtcat acatgatgca 2401 cttgctaaaa taaatgtaat agttagaatt aacattcttg atgatgttaa aataattcct 2461 tcattatata atggatatgg agataaacta aaatgtaaaa taccccaaaa atatgtaata 2521 aataatattg cttcagatat aattatagat aacattcctg atactaatga tgaaaatata 2581 gaataaaaac tttctctaat agaatataca aatattataa aaataatagg attgaatgta 2641 aataagatac ccacagaaaa atattttaaa gatgttccat ataatgatgt taatgaagga 2701 taagatacta aatgtgcttt aatattatta tagttactaa atataaaaaa tatatttata 2761 agaacggtga ttttgtgtgc cgttaacata taacggtaag aaggttcgcc ggggataaca 2821 ggttatagta tatatagagc tcaaatcttt atatactatt ggcacctcca tgtcgtctca 2881 tcgcagcctt gcaataaatt aatattattt agcgtgtatt gttgccttgt acacaccgct 2941 cgtcacgcaa atttatatta ctaagataaa gaactccagg cgttaacctg tagagttgag 3001 atggaaacag ccggaaagga aatattacgt ccaaatgata agaatatata tgaaatatac 3061 tagcatggga ctaaaaaatg ttatgttgtt ggtttaagcc cttttaccat acaagagatc 3121 gcgtactttg gactgaaaaa agctgtgagg aaactacatt aaaggaactc gactggccta 3181 caatataaga acgaacgctt ttaacgcctg acatggatgg ataatactcg acttttccaa 3241 agtataaccg ctgtcgctgg gactgtatgg atcgaatctt acttattcat atccaagcct 3301 cacttattgt taattatata ttatattttt ttgttttcaa tagatataca cttattacaa 3361 attgcaatca taaaacttta ggtctatact atttatggtt ttcattttta tttggtagtt 3421 atggtttttt attatctgtt attttacgta cagaattata ttcttcttct ttaagaataa 3481 ttgcacaaga aaatgttaac ttatataata tgatatttac attacatgga attattatga 3541 tattctttaa tataatgcca ggattatttg gaggattcgg taattacttc ctaccaattt 3601 tatgtggttc tccagaactt gcatatccaa gaattaatag tatatcttta ttattacaac 3661 caatagcttt tatattagtc attttatcta cagcagcaga atttggagga ggtactggat 3721 ggactttata tccaccatta agtacatcac ttatgtcttt atctcctgtt gcagtagatg 3781 ttatcattgt tggtctttta gtatctggta ttgctagtat tatgtcttct ttaaatttta 3841 ttactactgt aatgcatcta agatctaaag gtttaacact tggtatatta agtgtatcta 3901 catggtcatt aataattaca tctgtaatgc tattattaac attacctgtt ttaacaggtg 3961 gtgttttaat gttattatca gatttacatt ttaatacatt attttttgat cctacatttg 4021 ctggagatcc tattttatat caacatctat tttggttttt tggacatcct gaagtgtata 4081 ttttaatatt accagcattt ggtgttatta gtcatgtaat atctacaaat tattgtagaa 4141 gtttatttgg taatcaatct atgattttag caatgagttg tattgctata ttaggaagtg 4201 ttgtatgggc tcatcatatg tatactacag gtttagaagt agatacaaga gcatttttta 4261 catctacaac tatattaata tctataccta ctggaacaaa aatatttaat tggatatgta 4321 catatatggg tagtaatttt ggtataactc atagttcatc tttattatca ttactattta 4381 tatgtacatt tacttttggt ggtactacag gagtaatatt aggtaatgca gctattgata 4441 ttgcattaca tgatacttac tatgtaatcg ctcatttcca ttttgtatta tctataggtg 4501 caattattgc attgtttaca ttagtaagta gttttcaaga aaactttttt ggtaaacatt 4561 tacgtgaaaa ttctataata atattatggt caatcttatt ttttattgga gttgtattaa 4621 cattcttacc tatgcatttc cttggattta atgtaatgcc tagacgtatt cctgattatc 4681 cagacgcttt aaatggatgg aatatgattt gttcaattgg atcaacaatg actttatttg 4741 gtttatttat ttttaaataa tataaaatat tttttgttta tatgaattat tattctatta 4801 atttagcaaa agcacattta ttaaattacc catgcccatt aaatattaat ttcttatgga 4861 attatggatt tcttttaggt attatattct ttatacaaat attaacaggt gtatttttag 4921 caagtcgtta tactccagaa atatcttatg catattatag tatacaacat attttaagag 4981 aattatggag tggatggtgt tttagatata tgcatgctac aggtgcatct cttgtattct 5041 tattaactta tttacacatt ttaagaggat taaattattc atatttatat ttaccattat 5101 catggatatc aggattaatc atatttgcat tatttatagt tacagctttt ataggttacg 5161 ttttaccttg gggacaaatg agttattggg gtgcaactgt tataactaat ttattatctt 5221 caattccagt attagtaatt tggttatgtg gaggatatac tgtaagtgat cctacaatta 5281 aaagattttt tgtattacat tttatacttc cttttgtagc attatgtatt gtatttatac 5341 atatattctt tttacattta catggtagca caaatccttt agggtatgat acagctttaa 5401 aaataccctt ctatccaaat ctattaagtc ttgatgtaaa aggatttaat aatatattta 5461 tattattctt attacaaagt atttttggta taattccatt atctcatcca gataatgcta 5521 tattagttaa tacatatgtt acaccaattc aaattgttcc tgaatggtac tttttaccat 5581 tttatgcaat gttaaaaaca atacctagta aaacagcagg tttattaatt gttttagcat 5641 ctttacaatt attattttta ttagctgaac aaagaagttt aactactata atacaattta 5701 aaatgacatt tggtgctaga gaatattcag taccaatgat atggtttatg tgttcattct 5761 atgctttatt atggattgga tgtcagttac cacaagatat ttttatttta tatggtcgtt 5821 tatttataat atcattcttc tctagtggat tatttgcact tgttcattat aaaagaacac 5881 attatgatta cagctcccaa gcaaacattt aaattacaag gctacgataa gacgatatct 5941 ctgaatattg agcagaacaa tacagaccgt aaggttataa ttatgttaa // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Aug 17 2005 15:39:53