LOCUS AY598066 5985 bp DNA linear INV 12-JUL-2005 DEFINITION Plasmodium vivax isolate TFF30 mitochondrion, complete genome. ACCESSION AY598066 VERSION AY598066.1 GI:63022206 KEYWORDS . SOURCE mitochondrion Plasmodium vivax (malaria parasite P. vivax) ORGANISM Plasmodium vivax Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5985) AUTHORS Jongwutiwes,S., Putaporntip,C., Iwasaki,T., Ferreira,M.U., Kanbara,H. and Hughes,A.L. TITLE Mitochondrial Genome Sequences Support Ancient Population Expansion in Plasmodium vivax JOURNAL Mol. Biol. Evol. 22 (8), 1733-1739 (2005) PUBMED 15901839 REFERENCE 2 (bases 1 to 5985) AUTHORS Jongwutiwes,S. TITLE Direct Submission JOURNAL Submitted (13-APR-2004) Parasitology, Faculty of Medicine, Chulalongkorn University, Rama 4, Pathumwan, Bangkok 10330, Thailand FEATURES Location/Qualifiers source 1..5985 /organism="Plasmodium vivax" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="TFF30" /db_xref="taxon:5855" /country="Thailand" gene complement(1992..2783) /gene="cox3" CDS complement(1992..2783) /gene="cox3" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 3" /protein_id="AAY26669.1" /db_xref="GI:63022207" /translation="MLTAHKITVLINIFFIFSNYNNIKAHLVSYPSLTSLYGTSLKYF SVGILFTFNPIIFIIFVYSIRESFYSIFSSLVSGMLSIIISEAILFITYFWGILHFSL SPYPLYNEGIILTSSRMLILTITFILASASCMTACLQFLIEKGMSLEISSIVFIIYLL GECFASLQTTEYLHLGYCINDAISGTLFYCVTGLHFSHVIVGLLLLLIYFIRIVEMYD TNSEWSYSLYGISYIVLPHTDQITILYWHFVEIVWLFIEFFFYSE" gene <3323..4756 /gene="cox1" CDS <3323..4756 /gene="cox1" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 1" /protein_id="AAY26670.1" /db_xref="GI:63022208" /translation="FFVFNRYTLITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTEL YSSSLRIIAQENVNLYNMIFTLHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFILVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIVGLLVS GIASIMSSLNFITTVMHLRSKGLTLGILSVSTWSLIITSVMLLLTLPVLTGGVLMLLS DLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRSLFGN QSMILAMSCIAILGSVVWAHHMYTTGLEVDTRAFFTSTTILISIPTGTKIFNWICTYM GSNFGITHSSSLLSLLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIGLFTLVSSFQENFFGKHLRENSIIILWSILFFIGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGLFIFK" gene 4778..5908 /gene="cytb" CDS 4778..5908 /gene="cytb" /codon_start=1 /transl_table=4 /product="cytochrome b" /protein_id="AAY26671.1" /db_xref="GI:63022209" /translation="MNYYSINLAKAHLLNYPCPLNINFLWNYGFLLGIIFFIQILTGV FLASRYTPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYL YLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSSIPVLVIWLCGGYT VSDPTIKRFFVLHFILPFVALCIVFIHIFFLHLHGSTNPLGYDTALKIPFYPNLLSLD VKGFNNIFILFLLQSIFGIIPLSHPDNAILVNTYVTPIQIVPEWYFLPFYAMLKTIPS KTAGLLIVLASLQLLFLLAEQRSLTTIIQFKMTFGAREYSVPMIWFMCSFYALLWIGC QLPQDIFILYGRLFIISFFSSGLFALVHYKRTHYDYSSQANI" ORIGIN 1 aagttaggat aatgaaatta tagttaccat agctgtagat ggatgcttcg atatattata 61 tatttaagta ttaatcgaga ttacatgctc agccgccaaa aatataacga tattattacc 121 gtacaagccg ttagcaagac atgataggga gttgacaagt taaagaagtt ctggtttata 181 atagatacgt ttttaaagtt aggatgtatg ggataattgt agtacacctt aattggtttc 241 actttatttg gtttatagat attatgttcg gtattgcatg cctggtgttt ttaattaaga 301 cgctgacttc ctggctaaac ttcccaatga tatatcttcc aaatagattt cgcagaaaac 361 cgtctatatt catgtttgat tgacctttaa ccgctaatta cgaatcttcc aagaatattt 421 caagagtcca aggttcggtc tataattttc ctgttctgta attagatcac atgttttata 481 gttcatggag atatgactat accactattc atagagacaa ctaatggcat ctctctcgat 541 ttccagatgt tgagttacta agaggattct ctccacactt caattcgtac ttccactacc 601 aaaatataat ctcctgttct aatgttctag ggtttttcgc gttttttcag gagaaatccg 661 tatatcgatg tttttaaaat ctacgctatt ggattcaacg tccaggactt cctgacgttt 721 aataacgatt tctacttcca gcagccattt tggttcagct acaagttcac tgtcaactac 781 catgttacga cttcgcaccg actgttttct tttacctcac gagtcgatca ggaaggtttc 841 atccttaaat ctcgtaacca tgccaacaca taagaacttt ttagggaagt taaggtgctc 901 agggtcttac cgtcgggccg tatgattcca catattcatg gataattcta tttattagga 961 gtctcacact agcgacaatg gggaagtcgt tacaccgttc atgcaggacg gagattaccc 1021 gacaaggaat tttgctacct taggaccgtt tacgatacag ccgccgttta tcattgatgc 1081 cgggcagatg tcagtaactt gaactattca tcggaattat cagtgacttg tgttgtaacc 1141 ttacagacgc ttccagaata taacttctta taaatggtag cgccggtttc ccgggtatcc 1201 aatccagtgc tccattcaag gcatagagac tcagcctgtg ttcaactttg taggatatat 1261 aatatagctt ttggtatctc gtaatgtaga acaataatgg gttgaccgtc aaatcctttt 1321 cattaaaaga gtggactaat gcccagccaa caccatccaa tttgattggg aataatctgt 1381 gttacaatac tttttgatcc caggctggta aaaaatgtaa acttttagcc caaaagaata 1441 gaaacagatg ccaggccaaa aacccaaaaa tagagctatg acgctatcaa tttgacaagg 1501 cagataaatt ctttcataga acttaacgtt tcatcctcca tacataaata aaacggtaga 1561 tagggaacaa actgcctcaa gacgttctta acccagctca cgcatcgctt ctaacggtga 1621 actctcattc caatggaacc ttgttcaagt tcaaatagat tggtaaggta tagcgtttac 1681 tatcgaatga aacaatgtat tccaccgcta gtgtttgctt ctaacattcc acttgcttat 1741 aactgtatgg acgtaacctc caggcaaaga aaatgaccgg tcaaaacgga atcagttaac 1801 tatggatagc tgatactaac aatttatcat tactcaagtc agcatagtct atatgaaggt 1861 ttctatggaa acacacttcc cttctcgcca tttgatagcg gttaaccttt ctttttcctt 1921 acgtactcta gcttttaaca caatattatt gtctatacta gatactatag ttgaaacagg 1981 acatatattc attattctga atagaaaaag aactctataa ataaccatac aatttcaaca 2041 aaatgccagt ataatattgt aatttgatca gtatgaggta atacaatata agatatacca 2101 tataatgaat atgaccattc actattagta tcatacattt caactattct tataaaatat 2161 attaataata ataataaacc aactataaca tgtgaaaaat gtaaacctgt aacacaataa 2221 aataatgtac cagatatagc atcatttata caatatccta aatgtaagta ttcagttgtt 2281 tgaagtgatg caaaacattc tccaagtaag tatattataa atacaatact agaaatttct 2341 aaactcattc ctttttctat tagaaattgt aaacatgctg tcatacatga tgcacttgct 2401 aaaataaatg taatagttag aattaacatt cttgatgatg ttaaaataat tccttcatta 2461 tataatggat atggagataa actaaaatgt aaaatacccc aaaaatatgt aataaataat 2521 attgcttcag atataattat agataacatt cctgatacta atgatgaaaa tatagaataa 2581 aaactttctc taatagaata tacaaatatt ataaaaataa taggattgaa tgtaaataag 2641 atacccacag aaaaatattt taaagatgtt ccatataatg atgttaatga aggataagat 2701 actaaatgtg ctttaatatt attatagtta ctaaatataa aaaatatatt tataagaacg 2761 gtgattttgt gtgccgttaa catataacgg taagaaggtt cgccggggat aacaggttat 2821 agtatatata gagctcaaat ctttatatac tattggcacc tccatgtcgt ctcatcgcag 2881 ccttgcaata aattaatatt atttagcgtg tattgttgcc ttgtacacac cgctcgtcac 2941 gcaaatttat attactaaga taaagaactc caggcgttaa cctgtagagt tgagatggaa 3001 acagccggaa aggaaatatt acgtccaaat gataagaata tatatgaaat atactagcat 3061 gggactaaaa aatgttatgt tgttggttta agccctttta ccatacaaga gatcgcgtac 3121 tttggactga aaaaagctgt gaggaaacta cattaaagga actcgactgg cctacaatat 3181 aagaacgaac gcttttaacg cctgacatgg atggataata ctcgactttt ccaaagtata 3241 accgctgtcg ctgggactgt atggatcgaa tcttacttat tcatatccaa gcctcactta 3301 ttgttaatta tatattatat ttttttttgt tttcaataga tatacactta ttacaaattg 3361 caatcataaa actttaggtc tatactattt atggttttca tttttatttg gtagttatgg 3421 ttttttatta tctgttattt tacgtacaga attatattct tcttctttaa gaataattgc 3481 acaagaaaat gttaacttat ataatatgat atttacatta catggaatta ttatgatatt 3541 ctttaatata atgccaggat tatttggagg attcggtaat tacttcctac caattttatg 3601 tggttctcca gaacttgcat atccaagaat taatagtata tctttattat tacaaccaat 3661 agcttttata ttagtcattt tatctacagc agcagaattt ggaggaggta ctggatggac 3721 tttatatcca ccattaagta catcacttat gtctttatct cctgttgcag tagatgttat 3781 cattgttggt cttttagtat ctggtattgc tagtattatg tcttctttaa attttattac 3841 tactgtaatg catctaagat ctaaaggttt aacacttggt atattaagtg tatctacatg 3901 gtcattaata attacatctg taatgctatt attaacatta cctgttttaa caggtggtgt 3961 tttaatgtta ttatcagatt tacattttaa tacattattt tttgatccta catttgctgg 4021 agatcctatt ttatatcaac atctattttg gttttttgga catcctgaag tgtatatttt 4081 aatattacca gcatttggtg ttattagtca tgtaatatct acaaattatt gtagaagttt 4141 atttggtaat caatctatga ttttagcaat gagttgtatt gctatattag gaagtgttgt 4201 atgggctcat catatgtata ctacaggttt agaagtagat acaagagcat tttttacatc 4261 tacaactata ttaatatcta tacctactgg aacaaaaata tttaattgga tatgtacata 4321 tatgggtagt aattttggta taactcatag ttcatcttta ttatcattac tatttatatg 4381 tacatttact tttggtggta ctacaggagt aatattaggt aatgcagcta ttgatattgc 4441 attacatgat acttactatg taatcgctca tttccatttt gtattatcta taggtgcaat 4501 aattggattg tttacattag taagtagttt tcaagaaaac ttttttggta aacatttacg 4561 tgaaaattct ataataatat tatggtcaat cttatttttt attggagttg tattaacatt 4621 cttacctatg cattttcttg gatttaatgt aatgcctaga cgtattcctg attatccaga 4681 cgctttaaat ggatggaata tgatttgttc aattggatca acaatgactt tatttggttt 4741 atttattttt aaataatata aaatattttt tgtttatatg aattattatt ctattaattt 4801 agcaaaagca catttattaa attacccatg cccattaaat attaatttct tatggaatta 4861 tggatttctt ttaggtatta tattctttat acaaatatta acaggtgtat ttttagcaag 4921 tcgttatact ccagaaatat cttatgcata ttatagtata caacatattt taagagaatt 4981 atggagtgga tggtgtttta gatatatgca tgctacaggt gcatctcttg tattcttatt 5041 aacttattta cacattttaa gaggattaaa ttattcatat ttatatttac cattatcatg 5101 gatatcagga ttaatcatat ttgcattatt tatagttaca gcttttatag gttacgtttt 5161 accttgggga caaatgagtt attggggtgc aactgttata actaatttat tatcttcaat 5221 tccagtatta gtaatttggt tatgtggagg atatactgta agtgatccta caattaaaag 5281 attttttgta ttacatttta tacttccttt tgtagcatta tgtattgtat ttatacatat 5341 attcttttta catttacatg gtagcacaaa tcctttaggg tatgatacag ctttaaaaat 5401 acccttctat ccaaatctat taagtcttga tgtaaaagga tttaataata tatttatatt 5461 attcttatta caaagtattt ttggtataat tccattatct catccagata atgctatatt 5521 agttaataca tatgttacac caattcaaat tgttcctgaa tggtactttt taccatttta 5581 tgcaatgtta aaaacaatac ctagtaaaac agcaggttta ttaattgttt tagcatcttt 5641 acaattatta tttttattag ctgaacaaag aagtttaact actataatac aatttaaaat 5701 gacatttggt gctagagaat attcagtacc aatgatatgg tttatgtgtt cattctatgc 5761 tttattatgg attggatgtc agttaccaca agatattttt attttatatg gtcgtttatt 5821 tataatatca ttcttctcta gtggattatt tgcacttgtt cattataaaa gaacacatta 5881 tgattacagc tcccaagcaa acatttaaat tacaaggcta cgataagacg atatctctga 5941 atattgagca gaacaataca gaccgtaagg ttataattat gttaa // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Aug 17 2005 15:39:53