LOCUS AY598054 5991 bp DNA linear INV 12-JUL-2005 DEFINITION Plasmodium vivax isolate TC137 mitochondrion, complete genome. ACCESSION AY598054 VERSION AY598054.1 GI:63022158 KEYWORDS . SOURCE mitochondrion Plasmodium vivax (malaria parasite P. vivax) ORGANISM Plasmodium vivax Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5991) AUTHORS Jongwutiwes,S., Putaporntip,C., Iwasaki,T., Ferreira,M.U., Kanbara,H. and Hughes,A.L. TITLE Mitochondrial Genome Sequences Support Ancient Population Expansion in Plasmodium vivax JOURNAL Mol. Biol. Evol. 22 (8), 1733-1739 (2005) PUBMED 15901839 REFERENCE 2 (bases 1 to 5991) AUTHORS Jongwutiwes,S. TITLE Direct Submission JOURNAL Submitted (13-APR-2004) Parasitology, Faculty of Medicine, Chulalongkorn University, Rama 4, Pathumwan, Bangkok 10330, Thailand FEATURES Location/Qualifiers source 1..5991 /organism="Plasmodium vivax" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="TC137" /db_xref="taxon:5855" /country="Thailand" gene complement(1998..2789) /gene="cox3" CDS complement(1998..2789) /gene="cox3" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 3" /protein_id="AAY26633.1" /db_xref="GI:63022159" /translation="MLTAHKITVLINIFFIFSNYNNIKAHLVSYPSLTSLYGTSLKYF SVGILFTFNPIIFIIFVYSIRESFYSIFSSLVSGMLSIIISEAILFITYFWGILHFSL SPYPLYNEGIILTSSRMLILTITFILASASCMTACLQFLIEKGMSLEISSIVFIIYLL GECFASLQTTEYLHLGYCINDAISGTLFYCVTGLHFSHVIVGLLLLLIYFIRIVEMYD TNSEWSYSLYGISYIVLPHTDQITILYWHFVEIVWLFIEFFFYSE" gene <3329..4762 /gene="cox1" CDS <3329..4762 /gene="cox1" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 1" /protein_id="AAY26634.1" /db_xref="GI:63022160" /translation="FFVFNRYTLITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTEL YSSSLRIIAQENVNLYNMIFTLHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFILVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIVGLLVS GIASIMSSLNFITTVMHLRSKGLTLGILSVSTWSLIITSVMLLLTLPVLTGGVLMLLS DLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRSLFGN QSMILAMSCIAILGSVVWAHHMYTTGLEVDTRAFFTSTTILISIPTGTKIFNWICTYM GSNFGITHSSSLLSLLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIGLFTLVSSFQENFFGKHLRENSIIILWSILFFIGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGLFIFK" gene 4784..5914 /gene="cytb" CDS 4784..5914 /gene="cytb" /codon_start=1 /transl_table=4 /product="cytochrome b" /protein_id="AAY26635.1" /db_xref="GI:63022161" /translation="MNYYSINLAKAHLLNYPCPLNINFLWNYGFLLGIIFFIQILTGV FLASRYTPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYL YLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSSIPVLVIWLCGGYT VSDPTIKRFFVLHFILPFVALCIVFIHIFFLHLHGSTNPLGYDTALKIPFYPNLLSLD VKGFNNIFILFLLQSIFGIIPLSHPDNAILVNTYVTPIQIVPEWYFLPFYAMLKTIPS KTAGLLIVLASLQLLFLLAEQRSLTTIIQFKMTFGAREYSVPMIWFMCSFYALLWIGC QLPQDIFILYGRLFIISFFSSGLFALVHYKRTHYDYSSQANI" ORIGIN 1 aagttaggat aatgaaatta tagttaccat agctgtagat ggatgcttcg atatattata 61 tatttaagta ttaatcgaga ttacatgctc agccgccaaa aatataacga tattattacc 121 gtacaagccg ttagcaagac atgataggga gttgacaagt taaagaagtt ctggtttata 181 atagatacgt ttttaaagtt aggatgtatg ggataattgt agtacacctt aattggtttc 241 actttatttg gtttatagat attatgttcg gtattgcatg cctggtgttt ttaattaaga 301 cgctgacttc ctggctaaac ttcccaatga tatatcttcc aaatagattt cgcagaaaac 361 cgtctatatt catgtttgat tgacctttaa ccgctaatta cgaatcttcc aagaatattt 421 caagagtcca aggttcggtc tataattttc ctgttctgta attagatcac atgttttata 481 gttcatggag atatgactat accactattc atagagacaa ctaatggcat ctctctcgat 541 ttccagatgt tgagttacta agaggattct ctccacactt caattcgtac ttccactacc 601 aaaatataat ctcctgttct aatgttctag ggtttttcgc gttttttcag gagaaatccg 661 tatatcgatg tttttaaaat ctacgctatt ggattcaacg tccaggactt cctgacgttt 721 aataacgatt tctacttcca gcagccattt tggttcagct acaagttcac tgtcaactac 781 catgttacga cttcgcaccg actgttttct tttacctcac gagtcgatca ggaaggtttc 841 atccttaaat ctcgtaacca tgccaacaca taagaacttt ttagggaagt taaggtgctc 901 agggtcttac cgtcgggccg tatgattcca catattcatg gataattcta tttattagga 961 gtctcacact agcgacaatg gggaagtcgt tacaccgttc atgcaggacg gagattaccc 1021 gacaaggaat tttgctacct taggaccgtt tacgatacag ccgccgttta tcattgatgc 1081 cgggcagatg tcagtaactt gaactattca tcggaattat cagtgacttg tgttgtaacc 1141 ttacagacgc ttccagaata taacttctta taaatggtag cgccggtttc ccgggtatcc 1201 aatccagtgc tccattcaag gcatagagac tcagcctgtg ttcaactttg taggatatat 1261 aatatagctt ttggtatctc gtaatgtaga acaataatgg gttgaccgtc aaatcctttt 1321 cattaaaaga gtggactaat gcccagccaa caccatccaa tttgattggg aataatctgt 1381 gttacaatac tttttgatcc caggctggta aaaaatgtaa acttttagcc caaaagaata 1441 gaaacagatg ccaggccaaa aacccaaaaa tagagctatg acgctatcaa tttgacaagg 1501 cagataaatt ctttcataga acttaacgtt tcatcctcca tacataaata aaacggtaga 1561 tagggaacaa actgcctcaa gacgttctta acccagctca cgcatcgctt ctaacggtga 1621 actctcattc caatggaacc ttgttcaagt tcaaatagat tggtaaggta tagcgtttac 1681 tatcgaatga aacaatgtat tccaccgcta gtgtttgctt ctaacattcc acttgcttat 1741 aactgtatgg acgtaacctc caggcaaaga aaatgaccgg tcaaaacgga atcagttaac 1801 tatggatagc tgatactaac aatttatcat tactcaagtc agcatagtct atatgaaggt 1861 ttctatggaa acacacttcc cttctcgcca tttgatagcg gttaaccttt ctttttcctt 1921 acgtactcta gcttttaaca caatattatt gtctatacta gatactatag ttgaaacagg 1981 acatatacat atattcatta ttctgaatag aaaaagaact ctataaataa ccatacaatt 2041 tcaacaaaat gccagtataa tattgtaatt tgatcagtat gaggtaatac aatataagat 2101 ataccatata atgaatatga ccattcacta ttagtatcat acatttcaac tattcttata 2161 aaatatatta ataataataa taaaccaact ataacatgtg aaaaatgtaa acctgtaaca 2221 caataaaata atgtaccaga tatagcatca tttatacaat atcctaaatg taagtattca 2281 gttgtttgaa gtgatgcaaa acattctcca agtaagtata ttataaatac aatactagaa 2341 atttctaaac tcattccttt ttctattaga aattgtaaac atgctgtcat acatgatgca 2401 cttgctaaaa taaatgtaat agttagaatt aacattcttg atgatgttaa aataattcct 2461 tcattatata atggatatgg agataaacta aaatgtaaaa taccccaaaa atatgtaata 2521 aataatattg cttcagatat aattatagat aacattcctg atactaatga tgaaaatata 2581 gaataaaaac tttctctaat agaatataca aatattataa aaataatagg attgaatgta 2641 aataagatac ccacagaaaa atattttaaa gatgttccat ataatgatgt taatgaagga 2701 taagatacta aatgtgcttt aatattatta tagttactaa atataaaaaa tatatttata 2761 agaacggtga ttttgtgtgc cgttaacata taacggtaag aaggttcgcc ggggataaca 2821 ggttatagta tatatagagc tcaaatcttt atatactatt ggcacctcca tgtcgtctca 2881 tcgcagcctt gcaataaatt aatattattt agcgtgtatt gttgccttgt acacaccgct 2941 cgtcacgcaa atttatatta ctaagataaa gaactccagg cgttaacctg tagagttgag 3001 atggaaacag ccggaaagga aatattacgt ccaaatgata agaatatata tgaaatatac 3061 tagcatggga ctaaaaaatg ttatgttgtt ggtttaagcc cttttaccat acaagagatc 3121 gcgtactttg gactgaaaaa agctgtgagg aaactacatt aaaggaactc gactggccta 3181 caatataaga acgaacgctt ttaacgcctg acatggatgg ataatactcg acttttccaa 3241 agtataaccg ctgtcgctgg gactgtatgg atcgaatctt acttattcat atccaagcct 3301 cacttattgt taattatata ttatattttt ttttgttttc aatagatata cacttattac 3361 aaattgcaat cataaaactt taggtctata ctatttatgg ttttcatttt tatttggtag 3421 ttatggtttt ttattatctg ttattttacg tacagaatta tattcttctt ctttaagaat 3481 aattgcacaa gaaaatgtta acttatataa tatgatattt acattacatg gaattattat 3541 gatattcttt aatataatgc caggattatt tggaggattc ggtaattact tcctaccaat 3601 tttatgtggt tctccagaac ttgcatatcc aagaattaat agtatatctt tattattaca 3661 accaatagct tttatattag tcattttatc tacagcagca gaatttggag gaggtactgg 3721 atggacttta tatccaccat taagtacatc acttatgtct ttatctcctg ttgcagtaga 3781 tgttatcatt gttggtcttt tagtatctgg tattgctagt attatgtctt ctttaaattt 3841 tattactact gtaatgcatc taagatctaa aggtttaaca cttggtatat taagtgtatc 3901 tacatggtca ttaataatta catctgtaat gctattatta acattacctg ttttaacagg 3961 tggtgtttta atgttattat cagatttaca ttttaataca ttattttttg atcctacatt 4021 tgctggagat cctattttat atcaacatct attttggttt tttggacatc ctgaagtgta 4081 tattttaata ttaccagcat ttggtgttat tagtcatgta atatctacaa attattgtag 4141 aagtttattt ggtaatcaat ctatgatttt agcaatgagt tgtattgcta tattaggaag 4201 tgttgtatgg gctcatcata tgtatactac aggtttagaa gtagatacaa gagcattttt 4261 tacatctaca actatattaa tatctatacc tactggaaca aaaatattta attggatatg 4321 tacatatatg ggtagtaatt ttggtataac tcatagttca tctttattat cattactatt 4381 tatatgtaca tttacttttg gtggtactac aggagtaata ttaggtaatg cagctattga 4441 tattgcatta catgatactt actatgtaat cgctcatttc cattttgtat tatctatagg 4501 tgcaattatt ggattgttta cattagtaag tagttttcaa gaaaactttt ttggtaaaca 4561 tttacgtgaa aattctataa taatattatg gtcaatctta ttttttattg gagttgtatt 4621 aacattctta cctatgcatt ttcttggatt taatgtaatg cctagacgta ttcctgatta 4681 tccagacgct ttaaatggat ggaatatgat ttgttcaatt ggatcaacaa tgactttatt 4741 tggtttattt atttttaaat aatataaaat attttttgtt tatatgaatt attattctat 4801 taatttagca aaagcacatt tattaaatta cccatgccca ttaaatatta atttcttatg 4861 gaattatgga tttcttttag gtattatatt ctttatacaa atattaacag gtgtattttt 4921 agcaagtcgt tatactccag aaatatctta tgcatattat agtatacaac atattttaag 4981 agaattatgg agtggatggt gttttagata tatgcatgct acaggtgcat ctcttgtatt 5041 cttattaact tatttacaca ttttaagagg attaaattat tcatatttat atttaccatt 5101 atcatggata tcaggattaa tcatatttgc attatttata gttacagctt ttataggtta 5161 cgttttacct tggggacaaa tgagttattg gggtgcaact gttataacta atttattatc 5221 ttcaattcca gtattagtaa tttggttatg tggaggatat actgtaagtg atcctacaat 5281 taaaagattt tttgtattac attttatact tccttttgta gcattatgta ttgtatttat 5341 acatatattc tttttacatt tacatggtag cacaaatcct ttagggtatg atacagcttt 5401 aaaaataccc ttctatccaa atctattaag tcttgatgta aaaggattta ataatatatt 5461 tatattattc ttattacaaa gtatttttgg tataattcca ttatctcatc cagataatgc 5521 tatattagtt aatacatatg ttacaccaat tcaaattgtt cctgaatggt actttttacc 5581 attttatgca atgttaaaaa caatacctag taaaacagca ggtttattaa ttgttttagc 5641 atctttacaa ttattatttt tattagctga acaaagaagt ttaactacta taatacaatt 5701 taaaatgaca tttggtgcta gagaatattc agtaccaatg atatggttta tgtgttcatt 5761 ctatgcttta ttatggattg gatgtcagtt accacaagat atttttattt tatatggtcg 5821 tttatttata atatcattct tctctagtgg attatttgca cttgttcatt ataaaagaac 5881 acattatgat tacagctccc aagcaaacat ttaaattaca aggctacgat aagacgatat 5941 ctctgaatat tgagcagaac aatacagacc gtaaggttat aattatgtta a // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Aug 17 2005 15:39:53