LOCUS AY598048 5992 bp DNA linear INV 12-JUL-2005 DEFINITION Plasmodium vivax isolate TC22 mitochondrion, complete genome. ACCESSION AY598048 VERSION AY598048.1 GI:63022134 KEYWORDS . SOURCE mitochondrion Plasmodium vivax (malaria parasite P. vivax) ORGANISM Plasmodium vivax Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium. REFERENCE 1 (bases 1 to 5992) AUTHORS Jongwutiwes,S., Putaporntip,C., Iwasaki,T., Ferreira,M.U., Kanbara,H. and Hughes,A.L. TITLE Mitochondrial Genome Sequences Support Ancient Population Expansion in Plasmodium vivax JOURNAL Mol. Biol. Evol. 22 (8), 1733-1739 (2005) PUBMED 15901839 REFERENCE 2 (bases 1 to 5992) AUTHORS Jongwutiwes,S. TITLE Direct Submission JOURNAL Submitted (13-APR-2004) Parasitology, Faculty of Medicine, Chulalongkorn University, Rama 4, Pathumwan, Bangkok 10330, Thailand FEATURES Location/Qualifiers source 1..5992 /organism="Plasmodium vivax" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="TC22" /db_xref="taxon:5855" /country="Thailand" gene complement(1998..2789) /gene="cox3" CDS complement(1998..2789) /gene="cox3" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 3" /protein_id="AAY26615.1" /db_xref="GI:63022135" /translation="MLTAHKITVLINIFFIFSNYNNIKAHLVSYPSLTSLYGTSLKYF SVGILFTFNPIIFIIFVYSIRESFYSIFSSLVSGMLSIIISEAILFITYFWGILHFSL SPYPLYNEGIILTSSRMLILTITFILASASCMTACLQFLIEKGMSLEISSIVFIIYLL GECFASLQTTEYLHLGYCINDAISGTLFYCVTGLHFSHVIVGLLLLLIYFIRIVEMYD TNSEWSYSLYGISYIVLPHTDQITILYWHFVEIVWLFIEFFFYSE" gene <3330..4763 /gene="cox1" CDS <3330..4763 /gene="cox1" /note="start codon not determined" /codon_start=1 /transl_table=4 /product="cytochrome oxidase subunit 1" /protein_id="AAY26616.1" /db_xref="GI:63022136" /translation="FFVFNRYTLITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTEL YSSSLRIIAQENVNLYNMIFTLHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFILVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIVGLLVS GIASIMSSLNFITTVMHLRSKGLTLGILSVSTWSLIITSVMLLLTLPVLTGGVLMLLS DLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRSLFGN QSMILAMSCIAILGSVVWAHHMYTTGLEVDTRAFFTSTTILISIPTGTKIFNWICTYM GSNFGITHSSSLLSLLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIGLFTLVSSFQENFFGKHLRENSIIILWSILFFIGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGLFIFK" gene 4785..5915 /gene="cytb" CDS 4785..5915 /gene="cytb" /codon_start=1 /transl_table=4 /product="cytochrome b" /protein_id="AAY26617.1" /db_xref="GI:63022137" /translation="MNYYSINLAKAHLLNYPCPLNINFLWNYGFLLGIIFFIQILTGV FLASRYTPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHILRGLNYSYL YLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSSIPVLVIWLCGGYT VSDPTIKRFFVLHFILPFVALCIVFIHIFFLHLHGSTNPLGYDTALKIPFYPNLLSLD VKGFNNIFILFLLQSIFGIIPLSHPDNAILVNTYVTPIQIVPEWYFLPFYAMLKTIPS KTAGLLIVLASLQLLFLLAEQRSLTTIIQFKMTFGAREYSVPMIWFMCSFYALLWIGC QLPQDIFILYGRLFIISFFSSGLFALVHYKRTHYDYSSQANI" ORIGIN 1 aagttaggat aatgaaatta tagttaccat agctgtagat ggatgcttcg atatattata 61 tatttaagta ttaatcgaga ttacatgctc agccgccaaa aatataacga tattattacc 121 gtacaagccg ttagcaagac atgataggga gttgacaagt taaagaagtt ctggtttata 181 gtagatacgt ttttaaagtt aggatgtatg ggataatagt agtacacctt aattggtttc 241 actttatttg gtttatagat attatgttcg gtattgcatg cctggtgttt ttaattaaga 301 cgctgacttc ctggctaaac ttcccaatga tatatcttcc aaatagattt cgcagaaaac 361 cgtctatatt catgtttgat tgacctttaa ccgctaatta cgaatcttcc aagaatattt 421 caagagtcca aggttcggtc tataattttc ctgttctgta attagatcac atgttttata 481 gttcatggag atatgactat accactattc atagagacaa ctaatggcat ctctctcgat 541 ttccagatgt tgagttacta agaggattct ctccacactt caattcgtac ttccactacc 601 aaaatataat ctcctgttct aatgttctag ggtttttcgc gttttttcag gagaaatccg 661 tatatcgatg tttttaaaat ctacgctatt ggattcaacg tccaggactt cctgacgttt 721 aataacgatt tctacttcca gcagccattt tggttcagct acaagttcac tgtcaactac 781 catgttacga cttcgcaccg actgttttct tttacctcac gagtcgatca ggaaggtttc 841 atccttaaat ctcgtaacca tgccaacaca taagaacttt ttagggaagt taaggtgctc 901 agggtcttac cgtcgggccg tatgattcca catattcatg gataattcta tttattagga 961 gtctcacact agcgacaatg gggaagtcgt tacaccgttc atgcaggacg gagattaccc 1021 gacaaggaat tttgctacct taggaccgtt tacgatacag ccgccgttta tcattgatgc 1081 cgggcagatg tcagtaactt gaactattca tcggaattat cagtgacttg tgttgtaacc 1141 ttacagacgc ttccagaata taacttctta taaatggtag cgccggtttc ccgggtatcc 1201 aatccagtgc tccattcaag gcatagagac tcagcctgtg ttcaactttg taggatatat 1261 aatatagctt ttggtatctc gtaatgtaga acaataatgg gttgaccgtc aaatcctttt 1321 cattaaaaga gtggactaat gcccagccaa caccatccaa tttgattggg aataatctgt 1381 gttacaatac tttttgatcc caggctggta aaaaatgtaa acttttagcc caaaagaata 1441 gaaacagatg ccaggccaaa aacccaaaaa tagagctatg acgctatcaa tttgacaagg 1501 cagataaatt ctttcataga acttaacgtt tcatcctcca tacataaata aaacggtaga 1561 tagggaacaa actgcctcaa gacgttctta acccagctca cgcatcgctt ctaacggtga 1621 actctcattc caatggaacc ttgttcaagt tcaaatagat tggtaaggta tagcgtttac 1681 tatcgaatga aacaatgtat tccaccgcta gtgtttgctt ctaacattcc acttgcttat 1741 aactgtatgg acgtaacctc caggcaaaga aaatgaccgg tcaaaacgga atcagttaac 1801 tatggatagc tgatactaac aatttatcat tactcaagtc agcatagtct atatgaaggt 1861 ttctatggaa acacacttcc cttctcgcca tttgatagcg gttaaccttt ctttttcctt 1921 acgtactcta gcttttaaca caatattatt gtctatacta gatactatag ttgaaacagg 1981 acatatacat atattcatta ttctgaatag aaaaagaact ctataaataa ccatacaatt 2041 tcaacaaaat gccagtataa tattgtaatt tgatcagtat gaggtaatac aatataagat 2101 ataccatata atgaatatga ccattcacta ttagtatcat acatttcaac tattcttata 2161 aaatatatta ataataataa taaaccaact ataacatgtg aaaaatgtaa acctgtaaca 2221 caataaaata atgtaccaga tatagcatca tttatacaat atcctaaatg taagtattca 2281 gttgtttgaa gtgatgcaaa acattctcca agtaagtata ttataaatac aatactagaa 2341 atttctaaac tcattccttt ttctattaga aattgtaaac atgctgtcat acatgatgca 2401 cttgctaaaa taaatgtaat agttagaatt aacattcttg atgatgttaa aataattcct 2461 tcattatata atggatatgg agataaacta aaatgtaaaa taccccaaaa atatgtaata 2521 aataatattg cttcagatat aattatagat aacattcctg atactaatga tgaaaatata 2581 gaataaaaac tttctctaat agaatataca aatattataa aaataatagg attgaatgta 2641 aataagatac ccacagaaaa atattttaaa gatgttccat ataatgatgt taatgaagga 2701 taagatacta aatgtgcttt aatattatta tagttactaa atataaaaaa tatatttata 2761 agaacggtga ttttgtgtgc cgttaacata taacggtaag aaggttcgcc ggggataaca 2821 ggttatagta tatatagagc tcaaatcttt atatactatt ggcacctcca tgtcgtctca 2881 tcgcagcctt gcaataaatt aatattattt agcgtgtatt gttgccttgt acacaccgct 2941 cgtcacgcaa atttatatta ctaagataaa gaactccagg cgttaacctg tagagttgag 3001 atggaaacag ccggaaagga aatattacgt ccaaatgata agaatatata tgaaatatac 3061 tagcatggga ctaaaaaatg ttatgttgtt ggtttaagcc cttttaccat acaagagatc 3121 gcgtactttg gactgaaaaa agctgtgagg aaactacatt aaaggaactc gactggccta 3181 caatataaga acgaacgctt ttaacgcctg acatggatgg ataatactcg acttttccaa 3241 agtataaccg ctgtcgctgg gactgtatgg atcgaatctt acttattcat atccaagcct 3301 cacttattgt taattatata ttatattttt tttttgtttt caatagatat acacttatta 3361 caaattgcaa tcataaaact ttaggtctat actatttatg gttttcattt ttatttggta 3421 gttatggttt tttattatct gttattttac gtacagaatt atattcttct tctttaagaa 3481 taattgcaca agaaaatgtt aacttatata atatgatatt tacattacat ggaattatta 3541 tgatattctt taatataatg ccaggattat ttggaggatt cggtaattac ttcctaccaa 3601 ttttatgtgg ttctccagaa cttgcatatc caagaattaa tagtatatct ttattattac 3661 aaccaatagc ttttatatta gtcattttat ctacagcagc agaatttgga ggaggtactg 3721 gatggacttt atatccacca ttaagtacat cacttatgtc tttatctcct gttgcagtag 3781 atgttatcat tgttggtctt ttagtatctg gtattgctag tattatgtct tctttaaatt 3841 ttattactac tgtaatgcat ctaagatcta aaggtttaac acttggtata ttaagtgtat 3901 ctacatggtc attaataatt acatctgtaa tgctattatt aacattacct gttttaacag 3961 gtggtgtttt aatgttatta tcagatttac attttaatac attatttttt gatcctacat 4021 ttgctggaga tcctatttta tatcaacatc tattttggtt ttttggacat cctgaagtgt 4081 atattttaat attaccagca tttggtgtta ttagtcatgt aatatctaca aattattgta 4141 gaagtttatt tggtaatcaa tctatgattt tagcaatgag ttgtattgct atattaggaa 4201 gtgttgtatg ggctcatcat atgtatacta caggtttaga agtagataca agagcatttt 4261 ttacatctac aactatatta atatctatac ctactggaac aaaaatattt aattggatat 4321 gtacatatat gggtagtaat tttggtataa ctcatagttc atctttatta tcattactat 4381 ttatatgtac atttactttt ggtggtacta caggagtaat attaggtaat gcagctattg 4441 atattgcatt acatgatact tactatgtaa tcgctcattt ccattttgta ttatctatag 4501 gtgcaattat tggattgttt acattagtaa gtagttttca agaaaacttt tttggtaaac 4561 atttacgtga aaattctata ataatattat ggtcaatctt attttttatt ggagttgtat 4621 taacattctt acctatgcat tttcttggat ttaatgtaat gcctagacgt attcctgatt 4681 atccagacgc tttaaatgga tggaatatga tttgttcaat tggatcaaca atgactttat 4741 ttggtttatt tatttttaaa taatataaaa tattttttgt ttatatgaat tattattcta 4801 ttaatttagc aaaagcacat ttattaaatt acccatgccc attaaatatt aatttcttat 4861 ggaattatgg atttctttta ggtattatat tctttataca aatattaaca ggtgtatttt 4921 tagcaagtcg ttatactcca gaaatatctt atgcatatta tagtatacaa catattttaa 4981 gagaattatg gagtggatgg tgttttagat atatgcatgc tacaggtgca tctcttgtat 5041 tcttattaac ttatttacac attttaagag gattaaatta ttcatattta tatttaccat 5101 tatcatggat atcaggatta atcatatttg cattatttat agttacagct tttataggtt 5161 acgttttacc ttggggacaa atgagttatt ggggtgcaac tgttataact aatttattat 5221 cttcaattcc agtattagta atttggttat gtggaggata tactgtaagt gatcctacaa 5281 ttaaaagatt ttttgtatta cattttatac ttccttttgt agcattatgt attgtattta 5341 tacatatatt ctttttacat ttacatggta gcacaaatcc tttagggtat gatacagctt 5401 taaaaatacc cttctatcca aatctattaa gtcttgatgt aaaaggattt aataatatat 5461 ttatattatt cttattacaa agtatttttg gtataattcc attatctcat ccagataatg 5521 ctatattagt taatacatat gttacaccaa ttcaaattgt tcctgaatgg tactttttac 5581 cattttatgc aatgttaaaa acaataccta gtaaaacagc aggtttatta attgttttag 5641 catctttaca attattattt ttattagctg aacaaagaag tttaactact ataatacaat 5701 ttaaaatgac atttggtgct agagaatatt cagtaccaat gatatggttt atgtgttcat 5761 tctatgcttt attatggatt ggatgtcagt taccacaaga tatttttatt ttatatggtc 5821 gtttatttat aatatcattc ttctctagtg gattatttgc acttgttcat tataaaagaa 5881 cacattatga ttacagctcc caagcaaaca tttaaattac aaggctacga taagacgata 5941 tctctgaata ttgagcagaa caatacagac cgtaaggtta taattatgtt aa // Disclaimer | Write to the Help Desk NCBI | NLM | NIH   Aug 17 2005 15:39:53