LOCUS AB250690 6003 bp DNA linear INV 16-JAN-2007 DEFINITION Plasmodium gallinaceum mitochondrial DNA, complete genome. ACCESSION AB250690 VERSION AB250690.1 GI:112419507 KEYWORDS . SOURCE mitochondrion Plasmodium gallinaceum ORGANISM Plasmodium gallinaceum Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium; Plasmodium (Haemamoeba). REFERENCE 1 AUTHORS Omori,S., Sato,Y., Isobe,T., Yukawa,M. and Murata,K. TITLE Complete nucleotide sequences of the mitochondrial genomes of two avian malaria protozoa, Plasmodium gallinaceum and Plasmodium juxtanucleare JOURNAL Parasitol. Res. 100 (3), 661-664 (2007) PUBMED 17047998 REFERENCE 2 (bases 1 to 6003) AUTHORS Sato,Y. TITLE Direct Submission JOURNAL Submitted (16-FEB-2006) Yukita Sato, Nihon University College of Bioresource Sciences, Laboratory of Biomedical Science, Department of Veterinary Medicine; Kameino 1866, Fujisawa, Kanagawa 252-8510, Japan (E-mail:yukita@brs.nihon-u.ac.jp, Tel:81-466-84-3378, Fax:81-466-84-3445) FEATURES Location/Qualifiers source 1..6003 /organism="Plasmodium gallinaceum" /organelle="mitochondrion" /mol_type="genomic DNA" /db_xref="taxon:5849" /country="Philippines" gene 330..508 /gene="LS1" rRNA 330..508 /gene="LS1" /note="similar to prokaryotic large subunit ribosomal RNA" gene 700..754 /gene="SS4" rRNA 700..754 /gene="SS4" /note="similar to prokaryotic small subunit ribosomal RNA" gene 758..836 /gene="SS6" rRNA 758..836 /gene="SS6" /note="similar to prokaryotic small subunit ribosomal RNA" gene 893..1081 /gene="LS7" rRNA 893..1081 /gene="LS7" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1085..1163 /gene="LS6" rRNA 1085..1163 /gene="LS6" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1305..1377 /gene="SS3" rRNA 1305..1377 /gene="SS3" /note="similar to prokaryotic small subunit ribosomal RNA" gene 1401..1503 /gene="LS3" rRNA 1401..1503 /gene="LS3" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1567..1663 /gene="LS9" rRNA 1567..1663 /gene="LS9" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1667..1785 /gene="SS2" rRNA 1667..1785 /gene="SS2" /note="similar to prokaryotic small subunit ribosomal RNA" gene 1831..1865 /gene="LS4" rRNA 1831..1865 /gene="LS4" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1872..1895 /gene="LS5" rRNA 1872..1895 /gene="LS5" /note="similar to prokaryotic large subunit ribosomal RNA" gene complement(2019..>2768) /gene="coxIII" CDS complement(2019..>2768) /gene="coxIII" /function="component of mitochondrial electron transport chain" /note="Start codon is not identified." /codon_start=1 /transl_table=4 /product="cytochrome c oxidase subunit III" /protein_id="BAF03043.1" /db_xref="GI:112419508" /translation="FIFRNYSNIKAHLVSYPSLTSLYGTSLKYFSVGILFTFNPIILM IFIYSKRESFYSTFSSLASGMLSLIISEALLFVTYFWGILHFSLSPYPLSNEGIILTS SRMLILTITFILASASCMTACLQFLIEKGMSFEISSIVCIIYLIGECFASLQTTEYLH LEYCINDAILGTLFYCVTGLHFSHVIVGLILLLTYFIRIVEVYDTNSEWSYSLFGISY IVLPHSDQITLLYWHFVEIIWLFIEFLFYSE" gene 2805..2914 /gene="LS8" rRNA 2805..2914 /gene="LS8" /note="similar to prokaryotic large subunit ribosomal RNA" gene 2944..2971 /gene="SS5" rRNA 2944..2971 /gene="SS5" /note="similar to prokaryotic small subunit ribosomal RNA" gene 3217..3326 /gene="SS1" rRNA 3217..3326 /gene="SS1" /note="similar to prokaryotic small subunit ribosomal RNA" gene <3339..4772 /gene="coxI" CDS <3339..4772 /gene="coxI" /function="component of mitochondrial electron transport chain" /note="Start codon is not identified." /codon_start=1 /transl_table=4 /product="cytochrome c oxidase subunit I" /protein_id="BAF03044.1" /db_xref="GI:112419509" /translation="FIVFQRYALITNCNHKTLGLYYLWFSFIFGSYGFLLSVILRTEL YSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFGFVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIIGLLIS GVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLVITSVMLLLTLPVLTGGVLMLLS DLHFNTLFYDPTFAGDPVLYQHLFWFFGHPEVYILILPGFGVISHVISTNYSWSLLGN QSMILAMSCIAILGSLVWAHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYM GSNFGITHSSSLLALLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIALFTTVSAFQENFFGKHLRENSIIILWSMLFFVGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGLLIFK" gene 4795..5925 /gene="cytb" CDS 4795..5925 /gene="cytb" /function="component of mitochondrial electron transport chain" /codon_start=1 /transl_table=4 /product="apocytochrome b" /protein_id="BAF03045.1" /db_xref="GI:112419510" /translation="MNYYSINLAKAHLIHYPCPLNINFLWNYGFLLGIVFFIQILTGV LLATCYTPEISYAYYSVQHILRELWSGWCFRYMHATGASFVFILTYLHILRGLNYSYS YLPLSWISGLMIFLISIVTAFMGYVLPWGQMSFWGATVITNLLYFIPGLVSWICGGYL VSDPTLKRFFVLHFTFPFIALCIVFIHIFFLHLQGSTNPLGYDTALKIPFYPNLLSLD IKGFNNVLVLFLAQSLFGILPLSHPDNAITVDRYATPLHIVPEWYFLPFYAMLKTIPN KTAGLLVMLASLQILFLLAEQRNLTTLIQFKFAFGAREYSVPTIWFICSFYALLWIGC QLPQDIYILYGRLFIILFFFSGLFTLVQSKRTHYDYSSQANI" gene 5895..5987 /gene="LS2" rRNA 5895..5987 /gene="LS2" /note="similar to prokaryotic large subunit ribosomal RNA" ORIGIN 1 tagttaggat aatgtaaata tagttaccat agctgttgat ggatgattcg atcattaagt 61 atgtttgagt atcaatcgag ttaacatgct cagccgccaa aaataatata acgatattat 121 taccgtacaa gccgttagca agacatgaca gggagttggc aagttaaaga agttctggtt 181 tataatagat acgttattaa agttaggatg tatgggataa ttgtagtaca ccttgattgg 241 ttttactatt tatggtatat agaagtactt atatgttcgg tattgcatgc ctggtgtttt 301 taattaagac gctgacttcc tggctaaact tcccaatgat gtatcttcca aatagatttc 361 gcagaaaacc gtctatattc atgtttgatt gacctttaac cactaattac gaatctccca 421 agaatatttc aagagtccaa ggttcggtct attattttcc tgttctgtaa ttagatcaca 481 tgctttatag ttcatggaga catggctata ccactattca tagagacaac ttgtggcatc 541 tctctcgatt tccagatgtt gagttactaa gaggattctc tccacacttc aattcgtact 601 tccactacca aaatattctc tcctgttcaa acattctagg atttttcgcg ttttttcagg 661 agaaatccgt atatcgatgt ctttataaac tacgctattg gattcaacgt ccaggacttc 721 ctgacgctca ataacgattt ctacttccag cagccatttt ggttcagcta caagttcact 781 gtcaactacc atgttacgac ttcgctccga ctgtttcttt tacctcacga gtcgatcagg 841 aaggtttcat ccttaaatct cgtaaccatg ccaacacata agaacttttt agggaagtta 901 aggtgctcag ggtcttaccg tcgggccgta gtattccaca tattcatgga taattctatt 961 tattaggagt ctcacactag cgacaatggg gaagtcgtta caccgttcat gcaggacgga 1021 gattacccga caaggaattt tgctacctta ggaccgttta cgatacagcc gccgtttatc 1081 attgatgccg ggcagatgtc agtaacttga actattcatc ggaattatca gtgacttgtg 1141 ttgtaacctt acagacgctt ccagattatt aacttcttat aaatggtagc gccggtttcc 1201 cgggtctcca atccagtgct ccattcaagg catagagact cagcctatgt tcaactttgt 1261 agggttattt ataatataag cttttggtat ctcgtaatgt agaacaataa tgggttgacc 1321 gtcaaatcct tttcattaaa agagtggatt taatgcccag ccaacaccat ccaatttgat 1381 tgggaattat ctgtgttact atactttttg atcccaggct ggtaaaaaat gtaaactttt 1441 agcccaaaag aatagaaaca gatgccaggc caataaccca ttaaagagct atgacgctat 1501 cgattttgac aaggcgggta aattctttca tagaacttaa cgtatcatct tccatacaaa 1561 gataaaacgg tagataggga acaaactgcc tcaagacgtt cttaacccag ctcacgcatc 1621 gcttctaacg gtgaactctc attccaatgg aaccttgttc aagttcaaat tgattggtaa 1681 ggtgtagcgt ttactatcga atgaaacaat gtgttccacc gctagtgttt gcttctaaca 1741 ttccatttgc ttataactgt atggacgtaa cctccaggca aagaaaatga ccggtcaaaa 1801 cggaatcagt ttactatgga tagctgatac tagcaattta tcattactca agtcagcata 1861 gtctatatga aggtttctat ggaaacacac ttcccttctc gccatttatt tttgatagcg 1921 gttaaccttt ctttttcctt acgtactcta gctatgaaca caattattag ttcgtccata 1981 ttagcaacaa tacttgaaac aggacatata tgttcaaatt attctgaata gaataagaac 2041 tctataaata accaaataat ttctacaaaa tgccaatata ataaagtaat ttgatcagaa 2101 tgaggtaaaa caatatatga tataccaaat aatgagtatg accattcact atttgtatca 2161 taaacttcaa ctattcttat aaagtatgtt aataataata ttaaaccaac aataacatgt 2221 gaaaaatgta aacctgttac acaatagaat aatgttccta aaatggcatc atttatacaa 2281 tactctaaat gtagatattc agttgtttga agagatgcaa aacattcacc aattaaatat 2341 attatacata caatacttga tatttcaaaa ctcattcctt tttctattag aaattgaaga 2401 catgcagtca tacaagatgc actagctaat ataaatgtaa ttgttaaaat taacattcta 2461 gaagaagtta aaattatacc ttcatttgat aatggataag gagataaact aaaatgtaat 2521 ataccccaaa aatatgtaac aaataataaa gcttctgaaa ttattaatga taacatacca 2581 gatgctaatg atgaaaatgt agaatagaaa ctttctcttt tagaataaat aaatatcatt 2641 aaaataattg gattaaaagt aaataaaata ccaactgaaa aatattttaa agatgttcca 2701 tataatgaag ttaatgatgg ataagaaact aagtgtgctt ttatattact ataatttcta 2761 aatataaaga atattattta taagaacggt tttttttgtg tgccgtaaac atataacggt 2821 aagaaggttc gccggggata acaggttata gtatatatgg agctcttatc cttatatact 2881 attggcacct ccatgtcgtc tcatcgcagc cttgcaatat aataaaaaat atagcgtgta 2941 ttgttgcctt gtacacaccg ctcgtcacgc aagaattatt caatttagat gaagaactcc 3001 aggcgttaac ctgtagagtt gagatggaaa cagccggaaa ggaaatatta cgcccaaacg 3061 ataagatcat atatgaaata tactagcatg ggactaaaaa atgttatgct gttggtttaa 3121 gccctttttt accatacaag agatcgcgta ctttggaccg aaaaaagctg tgaggaaact 3181 acattaaagg aactcgactg gcctacacaa taagaacgaa cgcttttaac gcctgacatg 3241 gatggataat actcggcttt tccaaagtat aaccgctgtc gctgggactg tatggatcga 3301 atcttactca ttcatatcca agcctcaaat atatattatt tattgttttt caaagatatg 3361 cacttattac aaattgtaac cataaaactt taggtttata ctatttatgg ttttcattta 3421 tatttggtag ttatggattt ttattatctg ttattttacg tactgaatta tactcttcat 3481 cattaagaat aattgctcaa gaaaatgtta atttatataa tatgatattt acaattcatg 3541 gcattattat gatattcttt aatataatgc ctggattatt tggtggtttt ggtaattatt 3601 tcttaccaat tctatgtgga tctccagaat tagcataccc aagaataaat agtatatctt 3661 tattattaca acctattgct tttgggtttg taattttatc cacagcagct gaatttggtg 3721 gtggtactgg atggacttta tatccaccat taagtacttc attaatgtct ttatctcctg 3781 ttgcagtaga tgttataata attggacttt taatttcagg tgtagcaagt ataatgtctt 3841 cattaaattt tattactaca gtaatgcatc tacgtgctaa aggattaact cttggtatat 3901 taagtgtatc tacatggtca ttagtgataa catctgttat gttattatta acattacctg 3961 tattaactgg tggagtttta atgttattat ctgatttaca ttttaatact ttattttatg 4021 atcctacatt tgcaggtgat cctgtactat atcaacattt attctggttt tttggtcatc 4081 cagaagtata tattctaata ttaccaggtt ttggtgtaat tagtcatgta atatctacta 4141 actattcctg aagcttactt ggtaatcaat ctatgatttt agctatgagc tgtattgcaa 4201 tattaggaag tttagtatgg gctcatcata tgtatacaac aggtttagaa gtagatacaa 4261 gagcatattt tacttctaca actattttaa tatctattcc aactggtaca aaagtattta 4321 attggatatg tacatatatg ggtagtaatt ttggaataac acatagttca tctcttctag 4381 cattattatt tatatgtaca tttacttttg gtggtactac tggagtaata ttaggtaatg 4441 ctgctattga catagcttta catgatacat attatgtaat tgctcatttc cactttgttc 4501 tatcaattgg agcaattatt gcattattta caacagtaag tgcattccaa gaaaatttct 4561 ttggtaaaca tttacgtgaa aactcaatta ttatattatg gtcaatgtta ttcttcgtag 4621 gtgtagtttt aacattttta cctatgcatt tccttggatt taatgtaatg cctagacgta 4681 ttcctgatta tccagacgct ttaaatggtt ggaatatgat ttgctctatc ggatcaacta 4741 tgactttatt tggtttatta atttttaaat aatatataac tattttttgt ttatatgaat 4801 tattattcta ttaatttagc taaagcacac ttaattcatt atccatgtcc actaaatatt 4861 aatttcttat ggaattatgg atttctttta ggaatagtat tttttataca aattttaaca 4921 ggtgtattat tagcaacttg ttatactcca gaaatatctt atgcatatta tagtgtacaa 4981 cacatattaa gagaattatg gagtggatgg tgttttagat atatgcatgc aacaggtgct 5041 tcatttgtat ttattttaac ttacttacat attttaagag gattaaatta ttcatattca 5101 tatttacctt tatcatggat atctggatta atgatattct taatatctat tgttacagct 5161 tttatgggtt atgtattacc ttggggtcaa atgagtttct ggggtgctac tgttataact 5221 aatttacttt attttattcc tggacttgtt tcatggattt gtggtggata tcttgtaagt 5281 gacccaactt taaaaagatt ctttgtatta cattttactt ttccatttat agctttatgt 5341 atcgtattta tacacatatt cttcttacat ctacaaggta gcactaatcc tttagggtat 5401 gatacagctt taaaaatacc cttctatcca aatcttttaa gtcttgacat taaaggattt 5461 aataatgtat tagtattatt cttagctcaa agtttatttg gaatattacc attatcacat 5521 ccagataatg caattacagt agatagatat gctacacctt tacatattgt tccagaatgg 5581 tatttcttac ctttttatgc aatgttaaaa accattccta acaaaactgc tggtttatta 5641 gttatgttag catcactaca aatattattt ctattagcag aacaaagaaa tttaacaact 5701 cttatccaat ttaaatttgc ttttggtgct agagaatatt cagttcctac aatttggttt 5761 atatgttcat tctatgcttt attatggatt ggatgtcaat taccacaaga tatttacatt 5821 ttatatggtc gtttatttat tatattattc ttttttagtg gtttatttac acttgttcaa 5881 tctaaaagaa cacattatga ttacagctcc caagcaaaca tttaatatta caaggctgcg 5941 ataagacgac atttctgagc attgagcgga acaatacaga ccgtaaggtt ataattatgt 6001 ttt //