LOCUS AB250415 6014 bp DNA linear INV 16-JAN-2007 DEFINITION Plasmodium juxtanucleare mitochondrial DNA, complete genome. ACCESSION AB250415 VERSION AB250415.1 GI:111036411 KEYWORDS . SOURCE mitochondrion Plasmodium juxtanucleare ORGANISM Plasmodium juxtanucleare Eukaryota; Alveolata; Apicomplexa; Haemosporida; Plasmodium; Plasmodium (Novyella). REFERENCE 1 AUTHORS Omori,S., Sato,Y., Isobe,T., Yukawa,M. and Murata,K. TITLE Complete nucleotide sequences of the mitochondrial genomes of two avian malaria protozoa, Plasmodium gallinaceum and Plasmodium juxtanucleare JOURNAL Parasitol. Res. 100 (3), 661-664 (2007) PUBMED 17047998 REFERENCE 2 (bases 1 to 6014) AUTHORS Sato,Y. TITLE Direct Submission JOURNAL Submitted (15-FEB-2006) Yukita Sato, Nihon University College of Bioresource Sciences, Laboratory of Biomedical Science, Department of Veterinary Medicine; Kameino 1866, Fujisawa, Kanagawa 252-8510, Japan (E-mail:yukita@brs.nihon-u.ac.jp, Tel:81-466-84-3378, Fax:81-466-84-3445) FEATURES Location/Qualifiers source 1..6014 /organism="Plasmodium juxtanucleare" /organelle="mitochondrion" /mol_type="genomic DNA" /db_xref="taxon:111598" gene 329..507 /gene="LS1" rRNA 329..507 /gene="LS1" /note="similar to prokaryotic large subunit ribosomal RNA" gene 702..756 /gene="SS4" rRNA 702..756 /gene="SS4" /note="similar to prokaryotic small subunit ribosomal RNA" gene 760..838 /gene="SS6" rRNA 760..838 /gene="SS6" /note="similar to prokaryotic small subunit ribosomal RNA" gene 895..1083 /gene="LS7" rRNA 895..1083 /gene="LS7" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1087..1165 /gene="LS6" rRNA 1087..1165 /gene="LS6" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1306..1378 /gene="SS3" rRNA 1306..1378 /gene="SS3" /note="similar to prokaryotic small subunit ribosomal RNA" gene 1402..1510 /gene="LS3" rRNA 1402..1510 /gene="LS3" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1574..1670 /gene="LS9" rRNA 1574..1670 /gene="LS9" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1674..1792 /gene="SS2" rRNA 1674..1792 /gene="SS2" /note="similar to prokaryotic small subunit ribosomal RNA" gene 1838..1872 /gene="LS4" rRNA 1838..1872 /gene="LS4" /note="similar to prokaryotic large subunit ribosomal RNA" gene 1879..1903 /gene="LS5" rRNA 1879..1903 /gene="LS5" /note="similar to prokaryotic large subunit ribosomal RNA" gene complement(2025..>2774) /gene="coxIII" CDS complement(2025..>2774) /gene="coxIII" /function="component of mitochondrial electron transport chain" /note="Start codon is not identified." /codon_start=1 /transl_table=4 /product="cytochrome c oxidose subunit III" /protein_id="BAF02534.1" /db_xref="GI:111036412" /translation="FVFSNFSNIKAHLVSYPSITTLYATSLKYFSVGILFTFNPIILM IFIYSIRESFYSTFSSLTSGMLSIIISEALLFITYFWGILHFALSPYPLSNEGIVLTS SRMLILTITFILASASCMTACLQFLIEKGMSFEISSIVCILYLIGECFGSLQATEYLH LEYCINDAILGTLFYCVTGLHFTHVIVGLLLLLTYFIRIVEVYDVNTEWSYSLFGISY VVLPHSDQITILYWHFVEIVWLFIEFLFYSE" gene 2810..2919 /gene="LS8" rRNA 2810..2919 /gene="LS8" /note="similar to prokaryotic large subunit ribosomal RNA" gene 2954..2981 /gene="SS5" rRNA 2954..2981 /gene="SS5" /note="similar to prokaryotic small subunit ribosomal RNA" gene 3227..3336 /gene="SS1" rRNA 3227..3336 /gene="SS1" /note="similar to prokaryotic small subunit ribosomal RNA" gene <3350..4783 /gene="coxI" CDS <3350..4783 /gene="coxI" /function="component of mitochondrial electron transport chain" /note="Start codon is not identified." /codon_start=1 /transl_table=4 /product="cytochorom c oxidase subunit I" /protein_id="BAF02535.1" /db_xref="GI:111036413" /translation="FFVFQRYALITNCNHKTLGLYYLWFSFIFGTYGFLLSVILRTEL YSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPR INSISLLLQPIAFGLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVSVDVIVIGLLVS GIASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSAMLLLTLPVLTGGVLMLLS DLHFNTLFYDPTFAGDPVLYQHLFWFFGHPEVYILILPGFGVISHVISTNYSRSLFGN QSMILAMSCIAILGSLVWAHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYM GSNFGITHSSSLLALLFICTFTFGGTTGVILGNAAIDIALHDTYYVIAHFHFVLSIGA IIALFTTVSAFQENFFGKHLRENSIIILWSMLFFVGVVLTFLPMHFLGFNVMPRRIPD YPDALNGWNMICSIGSTMTLFGLLIFK" gene 4806..5936 /gene="cytb" CDS 4806..5936 /gene="cytb" /function="component of mitochondrial electron transport chain" /codon_start=1 /transl_table=4 /product="apocytochrome b" /protein_id="BAF02536.1" /db_xref="GI:111036414" /translation="MNYYSINLAKAHLIHYPCPLNINFLWNYGFLLGIVFFIQILTGV LLATCYTPEISYAYYSVQHILRELWSGWCFRYMHATGASFVFILTYLHILRGLNYSYS YLPLSWISGLIIFLISIVTAFMGYVLPWGQMSFWGATVITNLLYFIPGLVSWICGGYL VSDPTLKRFFVLHFIFPFIALCIVFIHIFFLHLQGSTNPLGYDTALKIPFYPNLLSLD IKGFNNVLVLFLSQSLFGILPLSHPDNAITVDRYATPLHIVPEWYFLPFYAMLKTIPN KTAGLLVMLASLQILFLLAEQRNLTTLIQLKFAFGVREYSVPIIWFICSFYALLWIGC QLPQDIFILYGRLFIILFFCSGLFSLVQSKRNSYDYSSQANI" gene 5906..5998 /gene="LS2" rRNA 5906..5998 /gene="LS2" /note="similar to prokaryotic large subunit ribosomal RNA" ORIGIN 1 aagttaggat aataaattat agttaccata gctgttgatg gatgcttcga tcattaaata 61 tgtttaagta tcaatcgaaa taacatgctc agccgccaaa aataatataa cgatattatt 121 accgtacaag ccgttagcaa gacatgacag ggagttggca agtttaaaga agttctggtt 181 taaaatagat acgttattaa cgttaggatg tatgggataa ttgtagtaca ccttgattgg 241 tttaactatt tttggtattt tgaaataaaa tgtgttcggt attgcatgcc tggtgttttt 301 tatttagacg ctgacttcct ggctaaactt cccaatgata tatcttccaa atagatttcg 361 tagaaaaccg tctatattca tgtttgattg acctttaacc actaattacg aatcttccaa 421 gaatatttca agagtccaag gttcggtcta ttattttcct gttctgtaat tagatcacat 481 gctttatagt tcatggagac atggctataa aaccactatt catagagaca acttgtggca 541 tctctctcga tttccagatg ttgagttact aagaggattc tctccacact tcaattcgta 601 cttccactac caaaatattc tctcatgttc aaacattcta gggtttttcg cgttttttca 661 gaaaaaatcc gtatatcgat gtctttaaaa actacgctat tggattcaac gtccaggact 721 tcctgacgct taataacgat ttctacttcc agcagccatt ttggttcagc tacaagttca 781 ctgtcaacta ccatgttacg acttcgcacc gactgtttct tttacctcac gagtcgatca 841 ggaaggtttc atccttaaat ctcgtaacca tgccaacaca taagaacttt ttagggaagt 901 taaggtgctc agggtcttac cgtcgggccg tagtattcca catattcatg gataattcta 961 tttattagga gtctcacact agcgacaatg gggaagtcgt tacaccgttc atgcaggacg 1021 gagattaccc gacaaggaat tttgctacct taggaccgtt tacgatacag ccgccgttta 1081 tcattgatgc cgggcagatg tcagtaactt gaactattca tcggaattat cagtgacttg 1141 tgttgtaacc ttacagacgc ttccagataa ttaacttctt ataaatggta gcgccggttt 1201 cccgggtatc aaatccagtg ctccattcaa ggcatagaga ctcagcctgt gttcaacttt 1261 gtagggttat ttataatata gcttttggta tctcgtaatg tagaacaata atgggttgac 1321 cgtcaaatcc ttttcattaa aagagtggat ttaatgccca gccaacacca tccaatttga 1381 ttgggaacta tctgtgttac aattcttttt gatcccaggc tggtaaaaaa tgtaaacttt 1441 tagcccaaaa gaatagaaac agatgccagg ccaaaaaccc aaataatttt tagagctatg 1501 acgctatcga ttttgacaag gcgggtaaat tctttcatag aacttaacgt atcatcttcc 1561 atacaaaaat aaaacggtag atagggaaca aactgcctca agacgttctt aacccagctc 1621 acgcatcgct tctaacggtg aactctcatt ccaatggaac cttgttcaag ttcaaataga 1681 ttggtaaggt atagcgttta ctatcgaatg aaacaatgtg ttccaccgct agtgtttgct 1741 tctaacattc catttgctta taactgtatg gacgtaacct ccaggcaaag aaaatgaccg 1801 gtcaaaacgg aatcagttaa ctatggatag ctgatactat caatttatca ttactcaagt 1861 cagcatagta tatatgaagg ttttctatgg aaacacactt cccttctcgc catttatttt 1921 tgatagcggt taacctttct ttttccttac gtactctagc tatgaacaca atataattcg 1981 tccatattag caaaatactt gaaacaggac atattatgtt ctcattattc tgaatagaat 2041 aggaactcaa taaataacca aacaatttca acaaaatgcc agtataaaat agtaatttga 2101 tcagaatgag gtaaaactac atatgatatt ccaaataaag aatatgacca ttcagtatta 2161 acgtcataaa cttcaactat tcttataaag tatgttaata ataataataa acctacaata 2221 acgtgtgtaa aatgtaaacc tgttacacaa taaaataatg tacctaatat tgcatcatta 2281 atacaatatt ctaaatgtaa atattcagta gcttgtaatg atccaaaaca ttcaccaatt 2341 agatataata tacatactat actagatatt tcaaaactca ttcctttttc tattagaaat 2401 tgtaaacatg cagtcataca agatgcactt gctaaaataa atgtaattgt taatattaac 2461 attcttgatg atgttaaaac tataccttca tttgataatg gatatggtga taaagcaaaa 2521 tgtaaaatac cccaaaaata tgttataaat aataatgctt ctgatataat tatacttaac 2581 attccagatg ttagtgatga aaatgtagaa taaaaacttt ctcttattga ataaataaat 2641 atcattaaaa taataggatt aaaagtgaat aaaataccta cagaaaaata ttttaaagat 2701 gttgcatata atgttgttat agatggataa gatactaaat gtgcttttat atttgaaaaa 2761 ttactaaata caaaaaatat tatttataag aacggtttat ttttgtgccg taaacatata 2821 acggtaagaa ggttcgccgg ggataacagg ttatagtata tatagagctc aaatctttat 2881 atactattgg cacctccatg tcgtctcatc gcagccttgc aatatttaca taataaaaac 2941 atagcgtgta ttgttgcctt gtacacaccg ctcgtcacgc aaaattataa ttattttgat 3001 aatgaactcc aggcgttaac ctgtagagtt gagatggaaa cagccggaaa ggaaatatta 3061 cgcccaaacg ataagatcat atatgaaata tactagcatg ggacaaaaaa atgttatgct 3121 gttggtttaa gccctttttt accatacaag agatcgcgta ctttggaccg aaaaaagctg 3181 tgaggaaact acattaaagg aactcgactg gcctacaaaa taagaacgaa cgcttttaac 3241 gcctgacatg gatggataat actcggcttt tccaaagtat aaccgctgtc gctgggactg 3301 tatggatcga atcttactca ttcatatcca agcctcaatt atttataatt tttttgtttt 3361 tcaaagatat gcattaatta caaattgtaa ccataaaact ttaggtttat actatttatg 3421 gttttcattc atatttggta cttatggatt cttattatct gttattttac gtacagaatt 3481 atattcatca tcattaagaa ttatagcaca agaaaatgtt aacttatata atatgatatt 3541 cacaatacat ggtattatta tgatattctt taatataatg cctggattat ttggtggatt 3601 tggaaattac tttttaccaa ttttatgtgg ttcaccagaa ttagcatatc caagaataaa 3661 tagtatatca ttattattac aacctattgc atttggatta gtcatcttat caacagctgc 3721 agaatttggt ggtggtacag gatggacatt atatccacct ttaagtacat ctctaatgtc 3781 attatcacca gtatcagtag acgttattgt aattggactt ttagtatctg gtatagctag 3841 tataatgtct tctttaaact ttattacaac agtaatgcac ttacgtgcaa aaggattaac 3901 acttggtata ctaagtgttt caacatggtc attaattata acatcagcta tgttattatt 3961 aacattacct gtattaactg gtggagtttt aatgttatta tctgatttac attttaatac 4021 attattttat gatcctacat tcgctggtga tccagtatta tatcaacatt tattctggtt 4081 ctttggtcat ccagaagtat atattttaat tctaccagga tttggtgtaa ttagtcatgt 4141 catatctact aattactcta gaagtttatt tggtaatcaa tctatgattt tagctatgag 4201 ttgtattgct atattaggaa gtttagtatg ggctcatcat atgtacacaa caggtttaga 4261 agtagataca agagcatatt ttacatctac aacaatttta atttctattc caactggtac 4321 aaaagtattc aattggatat gtacatatat gggtagtaat tttggtatta ctcatagttc 4381 atctttatta gcattattat ttatatgtac atttacattt ggtggtacaa caggagtaat 4441 tcttggtaac gctgcaattg atattgcttt acatgataca tactatgtaa ttgctcattt 4501 tcactttgtt ttatcaattg gagctattat agcattattt acaacagtaa gtgcatttca 4561 agaaaatttc tttggaaaac atttacgtga aaactcaata attatattat ggtcaatgtt 4621 attcttcgta ggagtagttt taacattttt acctatgcat ttccttggat ttaatgtaat 4681 gcctagacgt attccagatt atccagacgc tttaaatggt tggaatatga tttgttctat 4741 cggatcaact atgactttat ttggactatt aatttttaaa taataagtaa ctattttttg 4801 tttatatgaa ttattattct attaatttag caaaagcaca tttaattcat tatccatgtc 4861 cattaaacat aaatttttta tggaattatg gtttcctttt aggaatagta ttttttatac 4921 aaattttaac tggtgtacta ttagcaactt gttatactcc tgaaatatca tatgcttatt 4981 atagtgttca acatatatta agagaattat ggagcggatg gtgttttaga tatatgcatg 5041 caacaggtgc atcatttgta tttattctta cttatttaca tattttaaga ggattaaatt 5101 actcatactc atatttacct ttatcatgga tatctggatt aataatattt ttaatatcaa 5161 tagtaacagc ttttatggga tatgtattac cttggggtca aatgagcttt tggggtgcaa 5221 ctgttataac aaatttacta tactttattc ctggtcttgt ttcatggatt tgtggtggat 5281 atcttgtaag tgacccaaca ttaaaaagat tttttgtatt acattttata ttcccattca 5341 tagccttatg tattgtattt atacatattt tctttttaca tttacaaggt agcacaaatc 5401 ctttagggta tgatacagct ttaaaaatac ccttctatcc aaatctatta agtcttgata 5461 ttaaaggatt taataatgta ttagttttat ttttatcaca aagcttattt ggaatattac 5521 cattatcaca tccagataat gcaattacag tagatagata tgctactcct ttacatattg 5581 ttccagaatg gtatttctta cctttttatg ctatgttaaa aacaattcct aataaaacag 5641 caggtttatt agttatgtta gcatcattac aaatattatt tttattagct gaacaaagaa 5701 acttaacaac actaatacaa ttaaaattcg cctttggtgt tagagaatat tcagttccta 5761 ttatttggtt tatatgttca ttctatgctt tattatggat tggatgtcaa ttaccacaag 5821 atattttcat tttatatggt cgtttattta ttattttatt cttttgtagt ggtttatttt 5881 cacttgttca atcaaaaaga aatagttatg attacagctc ccaagcaaac atttaatatt 5941 acaaggctgc gataagacga tatttctgag cattgagcgg aacaatacag accgtaaggt 6001 tataattatg atta //