| Annotation Name | DNA-directed RNA polymerase beta' chain related cluster |
| Score | 6643&emsp |
| E-value | 0.0 |
| % Sequence Identity | 95% (1311/1372) |
| Locus | RPOC |
| EC Number | 2.7.7.6 |
| COG Function | Transcription |
| KEGG Pathway | Purine metabolism Pyrimidine metabolism RNA polymerase |
| Source | Accession | Description | Score | E-value | % Sequence Identity | Locus | EC Number | Informative Hit | Function/Pathway | GeneOntology |
| uniref90 | UniRef90_Q9RH40 | DNA-directed RNA polymerase beta' chain related cluster | 6643 | 0.0 | 95% (1311/1372) | RPOC | 2.7.7.6 | 1 | | GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0005634|nucleus|IEA; GO:0006350|transcription|IEA; GO:0006351|transcription, DNA-dependent|IEA; GO:0016740|transferase activity|IEA |
| nr | YP_067097 | DNA-directed RNA polymerase beta prime subunit; RNA nucleotidyltransferase (DNA-directed).; RNA polymerase I.; RNA polymerase II.; RNA polymerase III. [Rickettsia typhi str. Wilmington] gb|AAU03615.1| DNA-directed RNA polymerase beta prime subunit; RNA nucleotidyltransferase (DNA-directed).; RNA polymerase I.; RNA polymerase II.; RNA polymerase III. [Rickettsia typhi str. Wilmington] | 6715 | 0.0 | 96% (1326/1372) | | | 2 | | |
| cog | RP141 | [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit | 6744 | 0.0 | 97% (1333/1372) | | | 1 | Transcription | |
| kegg | rty:RT0130 | rpoC; DNA-directed RNA polymerase beta prime subunit [EC:2.7.7.6] [KO:K03046] | 6715 | 0.0 | 96% (1326/1372) | rpoC | 2.7.7.6 | 2 | Purine metabolism Pyrimidine metabolism RNA polymerase | |
| smart | 00663 | smart00663, RPOLA_N, RNA polymerase I subunit A N-terminus; | 1044 | 1e-115 | 50% (154/305) | RPOLA_N | | 1 | | |
| pfam | PF04997 | pfam04997, RNA_pol_Rpb1_1, RNA polymerase Rpb1, domain 1 | 833 | 7e-89 | 38% (136/352) | RNA_pol_Rpb1_1 | | 1 | | |
| pfam2 | PF04998 | pfam04998, RNA_pol_Rpb1_5, RNA polymerase Rpb1, domain 5 | 788 | 1e-83 | 24% (149/600) | RNA_pol_Rpb1_5 | | 2 | | |
| pfam3 | PF00623 | pfam00623, RNA_pol_Rpb1_2, RNA polymerase Rpb1, domain 2 | 538 | 1e-54 | 45% (75/165) | RNA_pol_Rpb1_2 | | 3 | | |
| pfam4 | PF04983 | pfam04983, RNA_pol_Rpb1_3, RNA polymerase Rpb1, domain 3 | 302 | 2e-27 | 29% (52/176) | RNA_pol_Rpb1_3 | | 4 | | |
| pfam5 | PF05000 | pfam05000, RNA_pol_Rpb1_4, RNA polymerase Rpb1, domain 4 | 207 | 3e-16 | 31% (34/109) | RNA_pol_Rpb1_4 | | 5 | | |