Score E
Sequences producing significant alignments: (bits) Value
gb|AAD35264.1|AE001702_4 (AE001702) conserved hypothetical ... 308 2e-83
sp|P54452|YQEG_BACSU HYPOTHETICAL 20.1 KD PROTEIN IN NUCB-A... 66 1e-10
dbj|BAA10083| (D63999) hypothetical protein [Synechocystis ... 58 5e-08
gb|AAF11518.1|AE002035_1 (AE002035) conserved hypothetical ... 53 1e-06
sp|P34492|YMQ1_CAEEL HYPOTHETICAL 88.1 KD PROTEIN K02D10.1 ... 35 0.30
emb|CAB50615.1| (AJ248288) hypothetical protein [Pyrococcus... 32 2.0
emb|CAA15028| (AJ235272) unknown [Rickettsia prowazekii] 32 2.6
gi|3294491 (AF016421) Similar to nitrophenylphosphatase; co... 32 2.6
gi|2736348 (AF039035) contains similarity to 4-nitrophenylp... 32 2.6
gb|AAB52266.1| (U97002) similar to Schizosaccharomyces pomb... 32 2.6
emb|CAB58037.1| (AL121804) BACR7C10.t [Drosophila melanogas... 32 3.5
gb|AAD36807.1|AE001812_17 (AE001812) nagD protein, putative... 32 3.5
emb|CAA19644| (AL023874) 1-evidence=predicted by content; 1... 32 3.5
gi|2707491 (U78227) T-cell receptor gamma V2.9 [Gallus gallus] 32 3.5
emb|CAB63038.1| (Z83844) dJ37E16.5 (novel protein similar t... 31 4.5
gi|1397298 (U61950) similar to 4-nitrophenylphosphatase (PN... 31 4.5
dbj|BAA31063.1| (AP000007) 217aa long hypothetical protein ... 31 5.9
gi|1915986 (U66069) 4-nitrophenylphosphatase [Tritrichomona... 31 5.9
emb|CAA61932| (X89810) AraL protein [Bacillus subtilis] 31 5.9
emb|CAA99590.1| (Z75208) hypothetical protein [Bacillus sub... 31 5.9
gi|1800145 (U83658) FH1/FH2 protein homolog [Emericella nid... 31 7.8
gb|AAD35264.1|AE001702_4 (AE001702) conserved hypothetical protein [Thermotoga maritima]
Length = 151
Score = 308 bits (780), Expect = 2e-83
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MKVERVERVEDIDFEGLLKEGYTCFFFDFDNTLVPWKESKLEESKRRLLIELAKKARVVV 60
MKVERVERVEDIDFEGLLKEGYTCFFFDFDNTLVPWKESKLEESKRRLLIELAKKARVVV
Sbjct: 1 MKVERVERVEDIDFEGLLKEGYTCFFFDFDNTLVPWKESKLEESKRRLLIELAKKARVVV 60
Query: 61 VSNGKPRKVDLPVMFIWRAGKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGF 120
VSNGKPRKVDLPVMFIWRAGKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGF
Sbjct: 61 VSNGKPRKVDLPVMFIWRAGKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGF 120
Query: 121 RVIKVEPISAKEFFGTKILRFFEKILEGKVR 151
RVIKVEPISAKEFFGTKILRFFEKILEGKVR
Sbjct: 121 RVIKVEPISAKEFFGTKILRFFEKILEGKVR 151
sp|P54452|YQEG_BACSU HYPOTHETICAL 20.1 KD PROTEIN IN NUCB-AROD INTERGENIC REGION
>gi|1303787|dbj|BAA12443| (D84432) YqeG [Bacillus
subtilis] >gi|2635014|emb|CAB14510| (Z99117) similar to
hypothetical proteins [Bacillus subtilis]
Length = 172
Score = 66.3 bits (159), Expect = 1e-10
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 4 ERVERVEDIDFEGLLKEGYTCFFFDFDNTLVPWKESKLEESKRRLLIELAKKA-RVVVVS 62
E V+ + I E L + D DNTLV W E+ + +V +VS
Sbjct: 10 EFVKNIFHITPEKLKERNVKGIITDLDNTLVEWDRPNATPRLIEWFEEMKEHGIKVTIVS 69
Query: 63 NGKPRKVDL-----PVMFIWRAGKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKI 117
N R+V L + FI++A KP R ++ ++ + CV+IGDQ+ TDVL G
Sbjct: 70 NNNERRVKLFSEPLGIPFIYKARKPMGKAFNRAVRNMELKKEDCVVIGDQLLTDVLGGNR 129
Query: 118 FGFRVIKVEPISAKEFFGTKILRFFEK 144
G+ I V P+++ + F T+ R E+
Sbjct: 130 NGYHTILVVPVASSDGFITRFNRQVER 156
dbj|BAA10083| (D63999) hypothetical protein [Synechocystis sp.]
Length = 184
Score = 57.8 bits (137), Expect = 5e-08
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 19 KEGYTCFFFDFDNTLVPWKESKLEESKRRLLIELAKKARVVVVSN--------GKPRKVD 70
+ G D D TLVP++ ++ E + + + K + +VSN G + +D
Sbjct: 37 RHGVKGLVLDVDETLVPFRGDQVSEELQAWIDPIKAKLPIWLVSNNMSESRIGGVAQTLD 96
Query: 71 LPVMFIWRAGKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVIKVEPI 128
LP F++ A KP KL + + + ++ + M+GD++FTDVL G G I VEP+
Sbjct: 97 LP--FLYGAAKPSRRKLRQAIAEMQLPVESVAMVGDRLFTDVLAGNRLGMFTILVEPM 152
gb|AAF11518.1|AE002035_1 (AE002035) conserved hypothetical protein [Deinococcus radiodurans]
Length = 174
Score = 53.1 bits (125), Expect = 1e-06
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 6 VERVEDIDFEGLLKEGYTCFFFDFDNTLVPWKESKLEESKRRLLIELAKKA-RVVVVSNG 64
+ V I E L G D DNTL+P+K + +L R+ ++SN
Sbjct: 10 IAHVSQITPEFLAARGLRGLVLDLDNTLIPYKSYEDAAEIIAWAADLRGAGIRLYLLSNA 69
Query: 65 KPRKVD--LPVMF---IWRAGKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFG 119
++ LP + + AGKP R L+ + + M+GDQ+FTDVL G + G
Sbjct: 70 TAKRAAFWLPKLGFDGVGMAGKPNPRAFRRALEVLGLPAPQVAMVGDQLFTDVLGGNLAG 129
Query: 120 FRVIKVEPISAKEFFGTKILRFFEKILEGK 149
+ VEP+ T++ R E+ + G+
Sbjct: 130 MHTVLVEPLIDNALPHTRLTRRLERQVLGR 159
sp|P34492|YMQ1_CAEEL HYPOTHETICAL 88.1 KD PROTEIN K02D10.1 IN CHROMOSOME III
>gi|630670|pir||S44837 K02D10.1 protein - Caenorhabditis
elegans >gi|289686 (L14710) homology with
4-nitrophenylphosphatase and mouse synaptosomal
associated protein 25; putative [Caenorhabditis elegans]
Length = 786
Score = 35.2 bits (79), Expect = 0.30
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFG 119
GKP L++ +DPKR VM GD++ TD++ G G
Sbjct: 221 GKPHKPMADFLLRRAHVDPKRTVMFGDRLDTDIMFGNANG 260
emb|CAB50615.1| (AJ248288) hypothetical protein [Pyrococcus abyssi]
Length = 216
Score = 32.5 bits (72), Expect = 2.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 91 LKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVI 123
L++ K++P + VM+GD + DVL K G + +
Sbjct: 151 LERLKVEPNKAVMVGDSLEQDVLGAKALGIKTV 183
emb|CAA15028| (AJ235272) unknown [Rickettsia prowazekii]
Length = 286
Score = 32.1 bits (71), Expect = 2.6
Identities = 19/56 (33%), Positives = 30/56 (52%), Gaps = 1/56 (1%)
Query: 79 AGKPFSLKLWRFLKKEKIDPK-RCVMIGDQIFTDVLTGKIFGFRVIKVEPISAKEF 133
+GKP+ + LK+ PK R +MIGD +TD+L GF V +++E+
Sbjct: 199 SGKPYEEIYHKILKECSNIPKNRMLMIGDTFYTDILAANRLGFDSALVLTGNSREY 254
gi|3294491 (AF016421) Similar to nitrophenylphosphatase; coded for by C.
elegans cDNA yk312h2.5; coded for by C. elegans cDNA
yk267e8.5; coded for by C. elegans cDNA yk312h2.3
[Caenorhabditis elegans]
Length = 335
Score = 32.1 bits (71), Expect = 2.6
Identities = 17/46 (36%), Positives = 25/46 (53%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVIKV 125
GKP + +K I+P R +MIGD+ TDV G+ G + + V
Sbjct: 252 GKPCTPAFNYIKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLV 297
gi|2736348 (AF039035) contains similarity to 4-nitrophenylphosphatases
[Caenorhabditis elegans]
Length = 349
Score = 32.1 bits (71), Expect = 2.6
Identities = 17/46 (36%), Positives = 25/46 (53%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVIKV 125
GKP + +K I+P R +MIGD+ TDV G+ G + + V
Sbjct: 262 GKPCTPAFNYIKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLV 307
gb|AAB52266.1| (U97002) similar to Schizosaccharomyces pombe
4-nitrophenylphosphatase (PNPPASE) (SP:Q00472,
NID:g5004) [Caenorhabditis elegans]
Length = 322
Score = 32.1 bits (71), Expect = 2.6
Identities = 17/46 (36%), Positives = 25/46 (53%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVIKV 125
GKP + +K I+P R +MIGD+ TDV G+ G + + V
Sbjct: 235 GKPCTPAFNYIKRKWNINPSRTMMIGDRTNTDVKFGRDHGMKTLLV 280
emb|CAB58037.1| (AL121804) BACR7C10.t [Drosophila melanogaster]
Length = 321
Score = 31.7 bits (70), Expect = 3.5
Identities = 20/63 (31%), Positives = 29/63 (45%), Gaps = 12/63 (19%)
Query: 97 DPKRCVMIGDQIFTDVLTGKIFGFRVIKV------------EPISAKEFFGTKILRFFEK 144
D KRC+ IGD + DV GK GF+ + V P+ A+ + L F +
Sbjct: 255 DCKRCIFIGDTLVQDVQFGKACGFQSLLVLSGCLTKEDMLNAPVEAQPDYYADSLADFTQ 314
Query: 145 ILE 147
+LE
Sbjct: 315 LLE 317
gb|AAD36807.1|AE001812_17 (AE001812) nagD protein, putative [Thermotoga maritima]
Length = 259
Score = 31.7 bits (70), Expect = 3.5
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 79 AGKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVIKV 125
AGKP L + +K + +R M+GD+++TDV GK G I V
Sbjct: 181 AGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILV 227
emb|CAA19644| (AL023874) 1-evidence=predicted by content;
1-method=genefinder;084; 1-method_score=60.13;
1-evidence_end; 2-evidence=predicted by match;
2-match_accession=SPTREMBL:O00808;
2-match_description=4-NITROPHENYLPHOSPHATASE.;
2-match...
Length = 352
Score = 31.7 bits (70), Expect = 3.5
Identities = 20/63 (31%), Positives = 29/63 (45%), Gaps = 12/63 (19%)
Query: 97 DPKRCVMIGDQIFTDVLTGKIFGFRVIKV------------EPISAKEFFGTKILRFFEK 144
D KRC+ IGD + DV GK GF+ + V P+ A+ + L F +
Sbjct: 286 DCKRCIFIGDTLVQDVQFGKACGFQSLLVLSGCLTKEDMLNAPVEAQPDYYADSLADFTQ 345
Query: 145 ILE 147
+LE
Sbjct: 346 LLE 348
gi|2707491 (U78227) T-cell receptor gamma V2.9 [Gallus gallus]
Length = 102
Score = 31.7 bits (70), Expect = 3.5
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 25 FFFDFDNTLVPWKESKLEESKRRLLIELAKKARV 58
FF DFDNT++ W + K + RLL K RV
Sbjct: 27 FFGDFDNTVIHWYQLKENKPPERLLFFAEGKTRV 60
emb|CAB63038.1| (Z83844) dJ37E16.5 (novel protein similar to
nitrophenylphosphatases from various organisms) [Homo
sapiens]
Length = 296
Score = 31.3 bits (69), Expect = 4.5
Identities = 15/44 (34%), Positives = 22/44 (49%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVI 123
GKP + IDP R +M+GD++ TD+L G G +
Sbjct: 212 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 255
gi|1397298 (U61950) similar to 4-nitrophenylphosphatase (PNPPase)
[Caenorhabditis elegans]
Length = 332
Score = 31.3 bits (69), Expect = 4.5
Identities = 19/48 (39%), Positives = 27/48 (55%), Gaps = 5/48 (10%)
Query: 80 GKPFSLKLWRFLKKE----KIDPKRCVMIGDQIFTDVLTGKIFGFRVI 123
GKP +L FLK K + +R VM GD++ TD++ GK GF +
Sbjct: 252 GKPHE-QLANFLKSRVQAGKFNSERTVMFGDRLDTDMMFGKNNGFTTV 298
dbj|BAA31063.1| (AP000007) 217aa long hypothetical protein [Pyrococcus horikoshii]
Length = 217
Score = 30.9 bits (68), Expect = 5.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 91 LKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVI 123
L+K KI PK VM+GD + D+L K G + +
Sbjct: 152 LEKLKISPKDAVMVGDSLEQDILGAKGVGMKSV 184
gi|1915986 (U66069) 4-nitrophenylphosphatase [Tritrichomonas foetus]
Length = 292
Score = 30.9 bits (68), Expect = 5.9
Identities = 15/42 (35%), Positives = 20/42 (46%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFR 121
GKP L K + +D +M+GDQ TD+ K G R
Sbjct: 201 GKPSKLMFEPLKKTKGLDASEAIMVGDQFKTDIQFAKNIGAR 242
emb|CAA61932| (X89810) AraL protein [Bacillus subtilis]
Length = 269
Score = 30.9 bits (68), Expect = 5.9
Identities = 17/53 (32%), Positives = 26/53 (48%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVIKVEPISAKE 132
GKP L + C++IGD I +D+ GK++G + V SAK+
Sbjct: 189 GKPSWLMAEAACTAMGLSAHECMIIGDSIESDIAMGKLYGMKSALVLTGSAKQ 241
emb|CAA99590.1| (Z75208) hypothetical protein [Bacillus subtilis]
>gi|2635342|emb|CAB14837| (Z99118) alternate gene name:
yseA; L-arabinose operon [Bacillus subtilis]
Length = 272
Score = 30.9 bits (68), Expect = 5.9
Identities = 17/53 (32%), Positives = 26/53 (48%)
Query: 80 GKPFSLKLWRFLKKEKIDPKRCVMIGDQIFTDVLTGKIFGFRVIKVEPISAKE 132
GKP L + C++IGD I +D+ GK++G + V SAK+
Sbjct: 192 GKPSWLMAEAACTAMGLSAHECMIIGDSIESDIAMGKLYGMKSALVLTGSAKQ 244
gi|1800145 (U83658) FH1/FH2 protein homolog [Emericella nidulans]
Length = 1790
Score = 30.5 bits (67), Expect = 7.8
Identities = 21/54 (38%), Positives = 27/54 (49%), Gaps = 5/54 (9%)
Query: 25 FFFDFDNTLVPWKESK-----LEESKRRLLIELAKKARVVVVSNGKPRKVDLPV 73
FF L WK+SK LEE++RR LA+K V ++NG D PV
Sbjct: 1527 FFAKLAAFLQEWKKSKEKNIALEEARRRTEASLARKRINVGLANGAGAAGDAPV 1580
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Jan 12, 2000 2:26 PM
Number of letters in database: 136,724,657
Number of sequences in database: 444,417
Lambda K H
0.327 0.146 0.437
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40967189
Number of Sequences: 444417
Number of extensions: 1595268
Number of successful extensions: 4604
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4585
Number of HSP's gapped (non-prelim): 21
length of query: 151
length of database: 136,724,657
effective HSP length: 48
effective length of query: 103
effective length of database: 115,392,641
effective search space: 11885442023
effective search space used: 11885442023
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 67 (30.5 bits)