BLASTP 2.0.10 [Aug-26-1999]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= a q (293 letters) Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR 444,417 sequences; 136,724,657 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs

Distribution of 18 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD35269.1|AE001702_9  (AE001702) conserved hypothetical ...   587  e-167
gi|2983423  (AE000712) hypothetical protein [Aquifex aeolicus]    170  1e-41
gi|2622876  (AE000930) conserved protein [Methanobacterium t...   162  4e-39
sp|Q57655|Y202_METJA  HYPOTHETICAL PROTEIN MJ0202 >gi|212817...   153  1e-36
dbj|BAA30687|  (AP000006) 287aa long hypothetical protein [P...   150  1e-35
emb|CAB49508.1|  (AJ248284) hypothetical protein [Pyrococcus...   145  3e-34
gi|2649480  (AE001027) conserved hypothetical protein [Archa...   137  1e-31
sp|Q58516|ASNH_METJA  PUTATIVE ASPARAGINE SYNTHETASE [GLUTAM...    38  0.079
pir||C64439  asparagine synthetase (EC 6.3.-.-) - Methanococ...    38  0.079
emb|CAB50396.1|  (AJ248287) PUTATIVE FLAGELLA-RELATED PROTEI...    38  0.10
emb|CAB49126.1|  (AJ248283) hypothetical protein [Pyrococcus...    33  2.6
emb|CAA97417.1|  (Z73102) cDNA EST EMBL:T00057 comes from th...    33  3.5
gi|2983748  (AE000734) hypothetical protein [Aquifex aeolicus]     32  4.5
gi|2983693  (AE000731) ferrous iron transport protein B [Aqu...    32  4.5
emb|CAA16972|  (AL021811) putative protein [Arabidopsis thal...    32  4.5
sp|P31353|PMM_CANAL  PHOSPHOMANNOMUTASE (PMM) >gi|170897 (M9...    32  4.5
sp|P44680|YOAA_HAEIN  PROBABLE ATP-DEPENDENT HELICASE HI0387...    32  5.9
sp|Q04777|ALDC_BACSU  ALPHA-ACETOLACTATE DECARBOXYLASE >gi|5...    32  5.9

 gb|AAD35269.1|AE001702_9 (AE001702) conserved hypothetical protein [Thermotoga maritima]
           Length = 293
           
 Score =  587 bits (1498), Expect = e-167
 Identities = 293/293 (100%), Positives = 293/293 (100%)

Query: 1   MRYLRADERCLICSLRQAENLLKKTITSPEKRWVIFREVFRIMSEMKWGMKPLEVNGEVH 60
           MRYLRADERCLICSLRQAENLLKKTITSPEKRWVIFREVFRIMSEMKWGMKPLEVNGEVH
Sbjct: 1   MRYLRADERCLICSLRQAENLLKKTITSPEKRWVIFREVFRIMSEMKWGMKPLEVNGEVH 60

Query: 61  RFIMEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAVSGNLIDLGIP 120
           RFIMEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAVSGNLIDLGIP
Sbjct: 61  RFIMEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAVSGNLIDLGIP 120

Query: 121 GWSVDEIFEKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKME 180
           GWSVDEIFEKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKME
Sbjct: 121 GWSVDEIFEKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKME 180

Query: 181 NPSLEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFE 240
           NPSLEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFE
Sbjct: 181 NPSLEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFE 240

Query: 241 FDVVISKGQGNFEGLYEEEKKNLFFLLTAKCDFVAEVLNVPLGGKVFISSSSL 293
           FDVVISKGQGNFEGLYEEEKKNLFFLLTAKCDFVAEVLNVPLGGKVFISSSSL
Sbjct: 241 FDVVISKGQGNFEGLYEEEKKNLFFLLTAKCDFVAEVLNVPLGGKVFISSSSL 293
 gi|2983423 (AE000712) hypothetical protein [Aquifex aeolicus]
           Length = 283
           
 Score =  170 bits (427), Expect = 1e-41
 Identities = 102/285 (35%), Positives = 155/285 (53%), Gaps = 10/285 (3%)

Query: 4   LRADERCLICSLRQAENLLKKTITSPEKRWVIFREVFRIMSEMK-WGMKPLEVNGEVHRF 62
           +RA   C+ C + Q  N +KK     EK   I     + +S+   +   P      + + 
Sbjct: 1   MRAHPECIPCLINQGLNAVKKLNLPKEKEMEIATRSLKFLSQFDTFDRSPAYYAYFIQQI 60

Query: 63  IMEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAVSGNLIDLGIPGW 122
           + E   EEDPFK+ K+ +N+ A +L+     ++L     +  A KL+  GN ID  I G 
Sbjct: 61  VKEISGEEDPFKDLKKLANEKAQELLS----KVLKGTPDLKEALKLSAIGNFIDFAIKG- 115

Query: 123 SVDEIFEKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKMENP 182
            V ++  +L ++ ++ F   D++KF   L NA ++F + DNAGEIVFDK  ++ LK    
Sbjct: 116 -VFDLERELQKLLDKDFLIFDYDKFLERLENAKSVFIIGDNAGEIVFDKVLVKTLK--GM 172

Query: 183 SLEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFEFD 242
             EVV  V+GKPI+NDAT+EDA+ + +  +  VI +G D+ G  L+    EF + F+  D
Sbjct: 173 GKEVVYGVKGKPILNDATLEDAEEVSMTRLCKVIDNGSDKVGTWLEDCKREFVETFYSSD 232

Query: 243 VVISKGQGNFEGLYEEEKKNLFFLLTAKCDFVAEVLNVPLGGKVF 287
           +VISKGQ NFE L   + ++LFFLL AKCD +        G  +F
Sbjct: 233 IVISKGQANFETLSSAD-RDLFFLLVAKCDPIGRETGGKRGELIF 276
 gi|2622876 (AE000930) conserved protein [Methanobacterium thermoautotrophicum]
           Length = 286
           
 Score =  162 bits (405), Expect = 4e-39
 Identities = 96/282 (34%), Positives = 150/282 (53%), Gaps = 7/282 (2%)

Query: 10  CLICSLRQAENLLKKTITSPEKRWVIFREVFRIMSE-MKWGMKPLEVNGEVHRFIMEYIK 68
           C  C LRQA   +       E +  +   +  ++SE  + G    E+   +HR I +   
Sbjct: 7   CAPCFLRQAREAIDLATDDEELKLRVMENILELLSERFRRGQVSNELGTRMHRLIKDMTG 66

Query: 69  EEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAVSGNLIDLGIPGWSVDEIF 128
            EDP+ +EKRR N++A++ +   R + L     + S  K+A++GN+ID G  G   D   
Sbjct: 67  SEDPYLDEKRRCNEIALRFLPTVR-DYLECHSDLESHVKVAITGNIIDFGALGLDFDHD- 124

Query: 129 EKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKMENPSLEVVV 188
             + E    P          + L  AS + Y+ DN GEI+FD+  IE  K+    + V V
Sbjct: 125 RGIQESLRAPLTINHVPLLEDRLREASEVLYLLDNTGEILFDRPLIE--KLAGYDVSVKV 182

Query: 189 AVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFEFDVVISKG 248
           AV+G+PI+NDA +EDA   GL+E+A ++++G D  G++    S+EFR      ++VI+KG
Sbjct: 183 AVKGEPILNDACMEDALEAGLDEVAEIVTTGTDSVGIVYSDLSDEFRDMLDGTELVIAKG 242

Query: 249 QGNFEGLYE--EEKKNLFFLLTAKCDFVAEVLNVPLGGKVFI 288
            GN+EGL E  +  +++F LL AKC  +A  L V  G  V +
Sbjct: 243 MGNYEGLTEISDGSRDIFCLLNAKCSAIARDLGVARGDNVAV 284
 sp|Q57655|Y202_METJA HYPOTHETICAL PROTEIN MJ0202 >gi|2128176|pir||C64325 hypothetical
           protein MJ0202 - Methanococcus jannaschii >gi|1590945
           (U67476) conserved hypothetical protein [Methanococcus
           jannaschii]
           Length = 304
           
 Score =  153 bits (384), Expect = 1e-36
 Identities = 91/288 (31%), Positives = 159/288 (54%), Gaps = 13/288 (4%)

Query: 10  CLICSLRQAENLLKKTITSPEKRWVIFREVFRIMSEMKW-GMKPLEVNGEVHRFIMEYIK 68
           C IC +RQ  +   +      +++ + +    ++ ++      P  +   VHR++ +   
Sbjct: 19  CAICIIRQVVDAANEITDDEREQFRLIKSTMEVIKDVYGESAVPAWMGTVVHRYLKKISN 78

Query: 69  EEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAK---LAVSGNLIDLGIPGWSVD 125
             DP+K  K ++N +A++ ++  R E+ N+ D +    K     ++GN+ID G     ++
Sbjct: 79  NNDPYKNLKEKANKIALQYLDKVR-EMSNTDDELERLRKKVLATIAGNVIDFGAYSTGIN 137

Query: 126 EIFEKLHEVYERPFDREDFEKFRNVLM--NASTLFYVADNAGEIVFDKFFIEVLKMENPS 183
            I + + +        ++  K  N L   N   + Y+ DNAGEI+FD+  +E +K  +  
Sbjct: 138 -IEKLIEDTLNGELKIDNSRKLLNDLKDKNIKKILYICDNAGEIIFDRVLMEEIKKYDK- 195

Query: 184 LEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFEFDV 243
            ++V  V+GKPI+NDAT+EDAK   ++EIA VI++G D  G++L++ SEEF K F   D+
Sbjct: 196 -DIVAVVKGKPILNDATLEDAKIAKIDEIAKVITTGSDIIGIILEECSEEFLKEFESADL 254

Query: 244 VISKGQGNFEGLYEEE---KKNLFFLLTAKCDFVAEVLNVPLGGKVFI 288
           +I+KG GN+E L E E    K ++++L AKC  VAE + V +G  V +
Sbjct: 255 IIAKGMGNYESLTEYEDKIDKPIYYILKAKCKPVAENIGVDVGDNVLL 302
 dbj|BAA30687| (AP000006) 287aa long hypothetical protein [Pyrococcus horikoshii]
           Length = 287
           
 Score =  150 bits (375), Expect = 1e-35
 Identities = 93/284 (32%), Positives = 150/284 (52%), Gaps = 6/284 (2%)

Query: 4   LRADERCLICSLRQAENLLKKTITSPE-KRWVIFREVFRIMSEMKWGMKPLEVNGEVHRF 62
           ++    CL C   Q + +++      + +R  +      +  E      P      +   
Sbjct: 1   MKVQYECLTCMANQCQRIVEMATQDMDIRRRAMILAAKLLAKEYNENAIPAIAGSLIFLE 60

Query: 63  IMEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAVSGNLIDLGIPGW 122
           + +++  +DPF E K +S +MA K+ ++ + ++    +    A KLA+ GN+ID  + G+
Sbjct: 61  LYKFLGNDDPFIEYKLKSEEMARKVADIIKRKLKLDFE---LAVKLAIIGNVIDFSV-GF 116

Query: 123 SVDEIFEKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKMENP 182
           S +++ E++ ++ +     +D ++    +  A  + Y+ DN GE  FD   IE ++ E  
Sbjct: 117 SPEDLEEEVEKMLKDKLYIDDSKELFEEVKRAENILYITDNVGEHYFDAILIEKIR-EIS 175

Query: 183 SLEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFEFD 242
           + EV +A +  PIINDAT+ED K  GLE++  VIS+G    GV L   S EF +AF + D
Sbjct: 176 NAEVYIAGKEGPIINDATVEDLKRAGLEKLGKVISTGTRIVGVPLKLVSREFMEAFNKAD 235

Query: 243 VVISKGQGNFEGLYEEEKKNLFFLLTAKCDFVAEVLNVPLGGKV 286
           V+I+KGQGNFE L E     +FFLL AKC  VA  L VP G  V
Sbjct: 236 VIIAKGQGNFETLSEINDSRIFFLLKAKCPAVARELKVPKGALV 279
 emb|CAB49508.1| (AJ248284) hypothetical protein [Pyrococcus abyssi]
           Length = 287
           
 Score =  145 bits (363), Expect = 3e-34
 Identities = 89/290 (30%), Positives = 153/290 (52%), Gaps = 6/290 (2%)

Query: 4   LRADERCLICSLRQAENLLKKTITSPE-KRWVIFREVFRIMSEMKWGMKPLEVNGEVHRF 62
           ++    CL C   Q + + +      E ++  +F     I  E      P      V   
Sbjct: 1   MKVHYECLTCMATQCQRIAEMATQDLELRKKAMFLAAKLIAREYHENAIPAIAGSLVFLE 60

Query: 63  IMEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAVSGNLIDLGIPGW 122
           + +++  +DPFK+ K RSN +A  +V++ + ++        +A KLA+ GN+ID  + G+
Sbjct: 61  LYKFLGNDDPFKKYKERSNAIARDVVKLLKEKL---DIDFKTAVKLAIIGNVIDFSV-GF 116

Query: 123 SVDEIFEKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKMENP 182
           S +++ E++ ++       ++ ++    +  A ++ Y+ DN GE  FD   +E +K E  
Sbjct: 117 SPEKLEEEVEKMLSEELYIDESDELLREIKRARSILYLTDNVGEHHFDAILLEKIK-EVS 175

Query: 183 SLEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFEFD 242
             E+ +A +   IIND T+ED K  G E    ++S+G    GV ++  S+EFR+ F E D
Sbjct: 176 RAELYIAGKEGAIINDVTVEDLKRDGFERFGRIVSTGTRIVGVPINDVSDEFRRIFEESD 235

Query: 243 VVISKGQGNFEGLYEEEKKNLFFLLTAKCDFVAEVLNVPLGGKVFISSSS 292
           ++I+KGQGNFE L E + + +FFLL AKC  VA  L VP G  V + +++
Sbjct: 236 IIIAKGQGNFETLSELKDERVFFLLKAKCPAVARELKVPRGALVCMRNAT 285
 gi|2649480 (AE001027) conserved hypothetical protein [Archaeoglobus fulgidus]
           Length = 288
           
 Score =  137 bits (341), Expect = 1e-31
 Identities = 83/254 (32%), Positives = 146/254 (56%), Gaps = 10/254 (3%)

Query: 38  EVFRIMSEMKWGMKPLEVN--GEVHRFIMEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEI 95
           E  +I++E  +  +P+  +    +HR + E +  EDP+ E K R+N++A +++ + +  +
Sbjct: 35  ESLKILAE-NYSSRPINAHLATRIHRRVYEILGVEDPYAEVKARANEVARQVLPLAKEIV 93

Query: 96  LNSPDPVYSAAKLAVSGNLIDLGIPGWSV--DEIFEKLHEVYERPFDREDFEKFRNVLMN 153
             S DP  +A  +++ GN  D G+ G  V  +E  + L    +      D E+ +   ++
Sbjct: 94  EGSDDPFKTAVIVSIVGNNFDYGVQGHKVVEEEFRDFLKRKVQEGLKINDTERIKE--LS 151

Query: 154 ASTLFYVADNAGEIVFDKFFIEVLKMENPSLEVVVAVRGKPIINDATIEDAKYIGLEEIA 213
           +  + Y+ DNAGEI FD   ++ +K     L  VV  RG+PII+DATIEDA+   +++IA
Sbjct: 152 SGKVVYLTDNAGEIFFDTLLMKEIKRRCEKLTAVV--RGRPIISDATIEDARLARVDKIA 209

Query: 214 T-VISSGVDEPGVMLDKASEEFRKAFFEFDVVISKGQGNFEGLYEEEKKNLFFLLTAKCD 272
             ++++G    G+++D+  +E RKA  E D++++KG  N+E L +   K + FLLTAKC+
Sbjct: 210 DELLTNGKGAIGIIMDELPDETRKALEEADLIVAKGMANYECLSDGSLKPIAFLLTAKCE 269

Query: 273 FVAEVLNVPLGGKV 286
            VA  + V +G  V
Sbjct: 270 PVARDIGVNVGDMV 283
 sp|Q58516|ASNH_METJA PUTATIVE ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING]
           Length = 541
           
 Score = 38.3 bits (87), Expect = 0.079
 Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 31/191 (16%)

Query: 53  LEVNGEVHRFI--MEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAV 110
           L  NGE++ +I   EY+K+   F+ +    N++ I L E    E L   D  Y+ A    
Sbjct: 89  LVCNGEIYNYIELREYLKQNHEFRTDS--DNEVIIHLYE---EEKLEELDGDYAFAIYDK 143

Query: 111 SGNLIDLGIPGWSVDEIFEKLHEVY--------------------ERPFDREDFEKFRNV 150
           S N++ L    + V  +F    + Y                    ER  D  +  K + +
Sbjct: 144 SKNVVRLARDMFGVKPLFYVDRDKYFAFASERKALWHLLINIDGCERDLDELN-SKIKTL 202

Query: 151 LMNASTLFYVADNAGEIVFDKFFIEVLKMENPSLEVVVAVRGKPIINDATIEDAKYIGLE 210
             N+  ++Y+ DN  EI+     +E+  M+  S E       + + N       +  GL+
Sbjct: 203 KPNSQLIYYLDDNRFEIIEGFKKLELNYMKERSYEEAKEYLDRALKNSVL---KRVRGLD 259

Query: 211 EIATVISSGVD 221
           ++  + S GVD
Sbjct: 260 KVGIICSGGVD 270
 pir||C64439 asparagine synthetase (EC 6.3.-.-) - Methanococcus jannaschii
           >gi|1591755 (U67554) asparagine synthetase (asnB)
           [Methanococcus jannaschii]
           Length = 544
           
 Score = 38.3 bits (87), Expect = 0.079
 Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 31/191 (16%)

Query: 53  LEVNGEVHRFI--MEYIKEEDPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKLAV 110
           L  NGE++ +I   EY+K+   F+ +    N++ I L E    E L   D  Y+ A    
Sbjct: 92  LVCNGEIYNYIELREYLKQNHEFRTDS--DNEVIIHLYE---EEKLEELDGDYAFAIYDK 146

Query: 111 SGNLIDLGIPGWSVDEIFEKLHEVY--------------------ERPFDREDFEKFRNV 150
           S N++ L    + V  +F    + Y                    ER  D  +  K + +
Sbjct: 147 SKNVVRLARDMFGVKPLFYVDRDKYFAFASERKALWHLLINIDGCERDLDELN-SKIKTL 205

Query: 151 LMNASTLFYVADNAGEIVFDKFFIEVLKMENPSLEVVVAVRGKPIINDATIEDAKYIGLE 210
             N+  ++Y+ DN  EI+     +E+  M+  S E       + + N       +  GL+
Sbjct: 206 KPNSQLIYYLDDNRFEIIEGFKKLELNYMKERSYEEAKEYLDRALKNSVL---KRVRGLD 262

Query: 211 EIATVISSGVD 221
           ++  + S GVD
Sbjct: 263 KVGIICSGGVD 273
 emb|CAB50396.1| (AJ248287) PUTATIVE FLAGELLA-RELATED PROTEIN D or E [Pyrococcus
           abyssi]
           Length = 419
           
 Score = 37.9 bits (86), Expect = 0.10
 Identities = 42/236 (17%), Positives = 105/236 (43%), Gaps = 29/236 (12%)

Query: 16  RQAENLLKKTITSPEKRWVIFREVFRIMSEMKWGMKPLEVNGEVHRFIMEYIKEEDPFKE 75
           +Q + ++K+ + +   +   + ++ + + E+  G K  E++ ++ R +     EE  F  
Sbjct: 44  KQLDEIIKRVLDAYGSQAAKYEQISKRVDEL--GKKLSELSSQLSRLVEAL--EEKKFAV 99

Query: 76  EKRRSNDMAIKLVEMF----------------RPEILNSPDPVYSAAKLAVSGNLIDLGI 119
            ++++ ++A K VE+                 RPEI+   + ++   +       ++  I
Sbjct: 100 HEKKAEEIAEKAVEVTEKVSKIEELLEKKPEERPEIVKKLEEIHEKVEA------LEEKI 153

Query: 120 PGWSVDEIFEKLHEVYERPFDREDF--EKFRNVLMNASTLFYVADNAGEIVFDKFFIEVL 177
            G  ++E  +++ E+ E+    E+   E+   +      L   A    E+V ++  +E +
Sbjct: 154 AGEKLEEAKKRVEELEEKIEKGEEVTAEEVSELAEKVEALEEEAKKPEEVVPEEEVVEEV 213

Query: 178 KMENPSLEVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEE 233
             E P  EVV     KP + +   E+ + +  + +  V++   ++P  ++++A  E
Sbjct: 214 IEEKPVEEVVEVEEEKPKVEEVVPEEVEVLEEKPVEEVVTE-EEKPVEVVEEAHPE 268
 emb|CAB49126.1| (AJ248283) hypothetical protein [Pyrococcus abyssi]
           Length = 483
           
 Score = 33.2 bits (74), Expect = 2.6
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 128 FEKLHEVYERPFDRED--FEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKMENPSLE 185
           F   H+ Y +P   E+  + +F N ++  S L Y+A    +IV   F   V  +EN   +
Sbjct: 295 FNSHHDAYYKPRTEEEKLYHRFTNTIVGPSVLVYIAPPLVKIV-GTFGARVTSIENAGDK 353

Query: 186 VVVAVRGKPIIN--DATIEDAKY 206
           ++VA    P     DAT  D  Y
Sbjct: 354 LLVATNTTPNTGALDATPFDTGY 376
 emb|CAA97417.1| (Z73102) cDNA EST EMBL:T00057 comes from this gene [Caenorhabditis
           elegans]
           Length = 283
           
 Score = 32.8 bits (73), Expect = 3.5
 Identities = 41/153 (26%), Positives = 71/153 (45%), Gaps = 20/153 (13%)

Query: 19  ENLLKKTI--TSPEKRWVIFREVFRIMSEMKWGMKPLEVNGEVHRFIMEYIKEEDPFKEE 76
           EN+ K  I  T P +RW   +++    SE      P+   G     +    K++  FKE 
Sbjct: 65  ENMNKMYIKSTDPVERWTSTKDLPTRESEFLHRNDPIWEYGFYEPPVERIPKDKLMFKE- 123

Query: 77  KRRSNDMAIKLVEMFRPEILN---SPDPVYSAAKLAVSGNLIDLGIPGWSVDEIFEKLHE 133
                  A++ +  FR E+L+   SP     AA+  V+ +++   +   ++D+I+E    
Sbjct: 124 -------ALEYLR-FRQELLSDSSSPAQKKQAAEF-VADHVVTSRVNAETLDDIYE---- 170

Query: 134 VYERPFDREDFEKFRNVLMNASTLFYVADNAGE 166
            Y RPF+R+D +K  N    A+   +V  N+ E
Sbjct: 171 -YFRPFERKDKQKVVNRHALAALQDHVQGNSDE 202
 gi|2983748 (AE000734) hypothetical protein [Aquifex aeolicus]
           Length = 764
           
 Score = 32.5 bits (72), Expect = 4.5
 Identities = 26/79 (32%), Positives = 38/79 (47%), Gaps = 4/79 (5%)

Query: 139 FDREDFEKFRNVLMNASTLFYVA--DNAGEIVFDKFFIEVLKMENPSLEVVVAVRGKPII 196
           ++ E+F KF     +   L Y    D   E + DK +IE  K+ + +L  V +  G P I
Sbjct: 443 YEGENFRKFLERTYSLKELAYSPQIDEVYEWLKDKGYIEKGKLSDKALFCVRS--GMPPI 500

Query: 197 NDATIEDAKYIGLEEIATV 215
           N       KY+GLEEI  +
Sbjct: 501 NYEEFLRRKYLGLEEIVYI 519
 gi|2983693 (AE000731) ferrous iron transport protein B [Aquifex aeolicus]
           Length = 689
           
 Score = 32.5 bits (72), Expect = 4.5
 Identities = 27/95 (28%), Positives = 39/95 (40%), Gaps = 7/95 (7%)

Query: 185 EVVVAVRGKPIINDATIEDAKYIGLEEIATVISSGVDEPGVMLDKASEEFRKAFFEFDVV 244
           ++ VAV G P +   TI       L  IA       + PGV ++K     R   +E   V
Sbjct: 3   KITVAVAGNPNVGKTTI-------LNAIAGTALKVGNWPGVTVEKKEATVRYKDYEIHFV 55

Query: 245 ISKGQGNFEGLYEEEKKNLFFLLTAKCDFVAEVLN 279
              G    E + E+EK  + FL     D +  VL+
Sbjct: 56  DLPGIYTLEPISEDEKIAVEFLEKGNVDVILTVLD 90
 emb|CAA16972| (AL021811) putative protein [Arabidopsis thaliana]
           Length = 838
           
 Score = 32.5 bits (72), Expect = 4.5
 Identities = 32/173 (18%), Positives = 72/173 (41%), Gaps = 30/173 (17%)

Query: 71  DPFKEEKRRSNDMAIKLVEMFRPEILNSPDPVYSAAKL------AVSGNLIDLGIPGW-- 122
           D ++  K+R N+ ++ ++    P++L   D +   A+L       ++ N+ D G      
Sbjct: 608 DAYRSIKQRENEASLAVL----PDLLEELDSMSEEARLLTLIEGVLAANIFDWGSRACVD 663

Query: 123 -----SVDEIFEKLHEVYERPFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVL 177
                ++ EI+       +RP+  +DF+ F+  ++ +  +       G +   + F+   
Sbjct: 664 LYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKERMLGSGDVI-----LGMLPLAREFL--- 715

Query: 178 KMENPSLEVVVAVRGKPIINDATIEDAKYI--GLEEIATVISSGVDEPGVMLD 228
                  EVV+     P +ND T  +   I  G  +   ++    +  G+++D
Sbjct: 716 ---RRGTEVVLVANSLPALNDVTAMELPDIVAGAAKHCDILRRAAEMGGLLVD 765
 sp|P31353|PMM_CANAL PHOSPHOMANNOMUTASE (PMM) >gi|170897 (M96770) phosphomannomutase
           [Candida albicans]
           Length = 252
           
 Score = 32.5 bits (72), Expect = 4.5
 Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 19/127 (14%)

Query: 86  KLVEMFRPEILNSPDPVYSAAKLA---VSGNLIDLGIPGWSVDEIFEKLHEVYER----- 137
           K VE   P +LN  D  +S   L    +   L       W  +E + KL +   R     
Sbjct: 55  KQVEQLGPNVLNDFDYCFSENGLTAYKLGKELASQSFINWIGNEKYNKLVKFILRYLSDI 114

Query: 138 --PFDREDFEKFRNVLMNASTLFYVADNAGEIVFDKF---------FIEVLKMENPSLEV 186
             P  R  F +FRN ++N S +   A       ++KF          +E LK E P   +
Sbjct: 115 DLPIRRGTFIEFRNGMINVSPIGRNASTQERNDYEKFDKQHHIRETMVEALKKEFPDFGL 174

Query: 187 VVAVRGK 193
             ++ G+
Sbjct: 175 TYSIGGQ 181
 sp|P44680|YOAA_HAEIN PROBABLE ATP-DEPENDENT HELICASE HI0387 >gi|1075170|pir||A64065
           probable ATP-dependent helicase (dinG) homolog -
           Haemophilus influenzae (strain Rd KW20) >gi|1573357
           (U32722) ATP-dependent helicase (dinG) [Haemophilus
           influenzae Rd]
           Length = 640
           
 Score = 32.1 bits (71), Expect = 5.9
 Identities = 20/61 (32%), Positives = 32/61 (51%), Gaps = 4/61 (6%)

Query: 227 LDKASEEFRKAFFEFDVVISKG---QGNFEGLYEEEK-KNLFFLLTAKCDFVAEVLNVPL 282
           L   S+   K   +F +++  G   +GN+  LY +   K  F LL  K DF++EV+ + L
Sbjct: 274 LGTTSDTLLKVVQDFRLLLGNGSNVRGNWRELYTQSAVKKAFELLQEKIDFLSEVIKLAL 333

Query: 283 G 283
           G
Sbjct: 334 G 334
 sp|Q04777|ALDC_BACSU ALPHA-ACETOLACTATE DECARBOXYLASE >gi|538916|pir||B47126
           acetolactate decarboxylase (EC 4.1.1.5) - Bacillus
           subtilis >gi|142471 (L04470) acetolactate decarboxylase
           [Bacillus subtilis] >gi|1929341|emb|CAB07786.1| (Z93767)
           alpha-acetolactate decarboxylase protein, AlsD [Bacillus
           subtilis] >gi|2636125|emb|CAB15617.1| (Z99122)
           alpha-acetolactate decarboxylase [Bacillus subtilis]
           Length = 255
           
 Score = 32.1 bits (71), Expect = 5.9
 Identities = 21/58 (36%), Positives = 32/58 (54%), Gaps = 3/58 (5%)

Query: 141 REDFEKFRNVLMNASTLFYVADNAGEIVFDKFFIEVLKM-ENPSLEVVVAVRGKPIIN 197
           REDFEK  N ++ +  LFY     G  +F K     +++ E P + +V AV+ +PI N
Sbjct: 110 REDFEKEINSMLPSRNLFYAIRIDG--LFKKVQTRTVELQEKPYVPMVEAVKTQPIFN 165
  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Jan 12, 2000  2:26 PM
  Number of letters in database: 136,724,657
  Number of sequences in database:  444,417
  
Lambda     K      H
   0.321    0.140    0.399 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78320691
Number of Sequences: 444417
Number of extensions: 3352492
Number of successful extensions: 8569
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 8541
Number of HSP's gapped (non-prelim): 20
length of query: 293
length of database: 136,724,657
effective HSP length: 55
effective length of query: 238
effective length of database: 112,281,722
effective search space: 26723049836
effective search space used: 26723049836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 70 (31.7 bits)