BLASTP 2.0.10 [Aug-26-1999]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= a q (201 letters) Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR 444,417 sequences; 136,724,657 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs

Distribution of 8 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|2983412  (AE000712) septum site-determining protein MinC ...   340  6e-93
gb|AAD36124.1|AE001765_3  (AE001765) septum site-determining...    84  7e-16
dbj|BAA10663|  (D64005) septum site-determining protein MinC...    80  1e-14
sp|Q01463|MINC_BACSU  SEPTUM SITE-DETERMINING PROTEIN MINC >...    70  1e-11
gb|AAF11310.1|AE002017_1  (AE002017) septum site-determining...    64  1e-09
sp|P18196|MINC_ECOLI  CELL DIVISION INHIBITOR MINC >gi|72934...    46  2e-04
gi|4154904  (AE001472) putative [Helicobacter pylori J99]          34  1.2
gb|AAD08105.1|  (AE000613) H. pylori predicted coding region...    31  6.2

 gi|2983412 (AE000712) septum site-determining protein MinC [Aquifex aeolicus]
           Length = 201
           
 Score =  340 bits (862), Expect = 6e-93
 Identities = 179/201 (89%), Positives = 179/201 (89%)

Query: 1   MIEIKGKTLPVIQIKIKEKGNIDXXXXXXXXXXSHNIFKGSLIILENPEVLKPEERKKVE 60
           MIEIKGKTLPVIQIKIKEKGNID          SHNIFKGSLIILENPEVLKPEERKKVE
Sbjct: 1   MIEIKGKTLPVIQIKIKEKGNIDKLLKELKEKLSHNIFKGSLIILENPEVLKPEERKKVE 60

Query: 61  EILKEFSRGFIXXXXXXXXXXXXSRLLIIERTLRAGQRIEHRGDILILGDVNKDAEVLAG 120
           EILKEFSRGFI            SRLLIIERTLRAGQRIEHRGDILILGDVNKDAEVLAG
Sbjct: 61  EILKEFSRGFIEGKKEGKEKREESRLLIIERTLRAGQRIEHRGDILILGDVNKDAEVLAG 120

Query: 121 GNIIVMGKLRGVAKAGLIGDHSAVIVALKMEPQLLQIGKKKAIMSEADRNSPGYPEVAKI 180
           GNIIVMGKLRGVAKAGLIGDHSAVIVALKMEPQLLQIGKKKAIMSEADRNSPGYPEVAKI
Sbjct: 121 GNIIVMGKLRGVAKAGLIGDHSAVIVALKMEPQLLQIGKKKAIMSEADRNSPGYPEVAKI 180

Query: 181 EGEDIVLEPIEGAERWLKLLL 201
           EGEDIVLEPIEGAERWLKLLL
Sbjct: 181 EGEDIVLEPIEGAERWLKLLL 201
 gb|AAD36124.1|AE001765_3 (AE001765) septum site-determining protein MinC, putative
           [Thermotoga maritima]
           Length = 210
           
 Score = 84.3 bits (205), Expect = 7e-16
 Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 4/104 (3%)

Query: 88  IIERTLRAGQRIEHRGDILILGDVNKDAEVLAGGNIIVMGKLRGVAKAGLIGDHSAVIVA 147
           +I+R +R+GQ + H GD+++ G+VNK AE+LAGG+++V GK +G  +AGL     AV+ A
Sbjct: 103 VIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEGGQAVVAA 162

Query: 148 LKMEPQLLQIGKKKAIMSEADRNSPGYPEVAKIEGEDIVLEPIE 191
           L ++  L+QI    A      +     P +A ++G  IV+EP +
Sbjct: 163 LDLQTSLIQI----AGFITHSKGEENVPSIAHVKGNRIVIEPFD 202
 dbj|BAA10663| (D64005) septum site-determining protein MinC [Synechocystis sp.]
           Length = 152
           
 Score = 80.0 bits (194), Expect = 1e-14
 Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 1/109 (0%)

Query: 87  LIIERTLRAGQRIEHRGDILILGDVNKDAEVLAGGNIIVMGKLRGVAKAGLIGDHSAVIV 146
           L++  TLR+G  I H GD++I+GDVN  + ++A G+I++ G LRG+A AG  G+  AVI+
Sbjct: 41  LVVRHTLRSGGEIRHGGDVVIIGDVNPGSSIVADGDILIWGCLRGMAHAGAKGNDQAVIM 100

Query: 147 ALKMEPQLLQIGKKKAIMSEADRNSPGYPEVAKIEGEDIVLEPIEGAER 195
            L++    ++IG + A +  AD      PE+A I  E I L P+   +R
Sbjct: 101 ILRLAACQIRIGDRLARVG-ADAVDRREPEIAYITSEGIRLTPVRQFQR 148
 sp|Q01463|MINC_BACSU SEPTUM SITE-DETERMINING PROTEIN MINC >gi|322176|pir||F45239 septum
           placement determinant minC - Bacillus subtilis
           >gi|142858 (M96343) MinC protein [Bacillus subtilis]
           >gi|143215 (M95582) putative [Bacillus subtilis]
           >gi|580892|emb|CAA78817| (Z15113) MinC [Bacillus
           subtilis] >gi|2635265|emb|CAB14760| (Z99118) minC
           [Bacillus subtilis]
           Length = 226
           
 Score = 70.2 bits (169), Expect = 1e-11
 Identities = 32/74 (43%), Positives = 52/74 (70%)

Query: 84  SRLLIIERTLRAGQRIEHRGDILILGDVNKDAEVLAGGNIIVMGKLRGVAKAGLIGDHSA 143
           + ++ + + +R+GQ ++ +GD+L++GDVN    V AGGNI V+G L+G+A AG  G++ A
Sbjct: 103 AEIISVSKIVRSGQVLQVKGDLLLIGDVNPGGTVRAGGNIFVLGSLKGIAHAGFNGNNQA 162

Query: 144 VIVALKMEPQLLQI 157
           VI A +M P  L+I
Sbjct: 163 VIAASEMLPTQLRI 176
 gb|AAF11310.1|AE002017_1 (AE002017) septum site-determining protein, putative [Deinococcus
           radiodurans]
           Length = 169
           
 Score = 63.6 bits (152), Expect = 1e-09
 Identities = 36/88 (40%), Positives = 53/88 (59%), Gaps = 1/88 (1%)

Query: 84  SRLLIIERTLRAGQRIEHRGDILILGDVNKDAEVLAGGNIIVMGKLRGVAKAGLIGDHSA 143
           ++ +I+  ++RAG R E+RG +++LGDVN  AE++A G++IV G LRGV  AG  G H  
Sbjct: 57  AQTVIVPHSVRAGFRGEYRGSVVVLGDVNPGAELIAAGDVIVAGALRGVVHAGYGGTHPD 116

Query: 144 VIV-ALKMEPQLLQIGKKKAIMSEADRN 170
            IV A  +    ++IG   A   E   N
Sbjct: 117 PIVWARPIASAQIRIGDAVARAPEGSSN 144
 sp|P18196|MINC_ECOLI CELL DIVISION INHIBITOR MINC >gi|72934|pir||CEECIC cell division
           inhibitor minC - Escherichia coli >gi|146866 (J03153)
           MinC protein [Escherichia coli]
           >gi|1651575|dbj|BAA36010| (D90751) Cell division
           inhibitor MinC. [Escherichia coli]
           >gi|1651579|dbj|BAA36023| (D90752) Cell division
           inhibitor MinC. [Escherichia coli] >gi|1787424
           (AE000216) cell division inhibitor, inhibits ftsZ ring
           formation [Escherichia coli]
           Length = 231
           
 Score = 46.1 bits (107), Expect = 2e-04
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 88  IIERTLRAGQRI-EHRGDILILGDVNKDAEVLAGGNIIVMGKLRGVAKAGLIGDHSAVIV 146
           +I+  +R+GQRI   + D+++   V+  AE++A GNI V G +RG A AG  GD    I 
Sbjct: 127 LIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGDRETQIF 186

Query: 147 ALKMEPQLLQI 157
              +  +L+ I
Sbjct: 187 CTNLMAELVSI 197
 gi|4154904 (AE001472) putative [Helicobacter pylori J99]
           Length = 194
           
 Score = 33.6 bits (75), Expect = 1.2
 Identities = 13/44 (29%), Positives = 27/44 (60%)

Query: 88  IIERTLRAGQRIEHRGDILILGDVNKDAEVLAGGNIIVMGKLRG 131
           I ER +R+G+ I     ++ LG+++  A++++ G++ V G   G
Sbjct: 95  IYERNIRSGEEIYSTNHLIFLGNIHNGAKIISEGSVSVYGVCEG 138
 gb|AAD08105.1| (AE000613) H. pylori predicted coding region HP1053 [Helicobacter
           pylori 26695]
           Length = 217
           
 Score = 31.3 bits (69), Expect = 6.2
 Identities = 13/44 (29%), Positives = 26/44 (58%)

Query: 88  IIERTLRAGQRIEHRGDILILGDVNKDAEVLAGGNIIVMGKLRG 131
           I ER +R+G+ I     ++ LG+++  A++++ G + V G   G
Sbjct: 118 IYERHIRSGEEIYSTNHLIFLGNIHNGAKIISEGCVSVYGVCEG 161
  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Jan 12, 2000  2:26 PM
  Number of letters in database: 136,724,657
  Number of sequences in database:  444,417
  
Lambda     K      H
   0.318    0.141    0.384 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45461158
Number of Sequences: 444417
Number of extensions: 1542306
Number of successful extensions: 3905
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3897
Number of HSP's gapped (non-prelim): 8
length of query: 201
length of database: 136,724,657
effective HSP length: 56
effective length of query: 145
effective length of database: 111,837,305
effective search space: 16216409225
effective search space used: 16216409225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 68 (30.9 bits)