Score E
Sequences producing significant alignments: (bits) Value
gi|2983421 (AE000712) hypothetical protein [Aquifex aeolicus] 1278 0.0
sp|P77488|DXS_ECOLI 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (D... 601 e-171
sp|P45205|DXS_HAEIN 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (D... 594 e-169
sp|P54523|DXS_BACSU PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SY... 590 e-167
sp|P73067|DXS_SYNY3 PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SY... 571 e-162
emb|CAB60078.1| (Y18874) 1-deoxy-xylulose 5-phosphate synth... 550 e-155
sp|O22567|CLA1_ORYSA PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE S... 548 e-155
emb|CAA75778| (Y15782) transketolase 2 [Capsicum annuum] 541 e-153
gb|AAD38941.1|AF143812_1 (AF143812) 1-D-deoxyxylulose 5-pho... 541 e-153
emb|CAB45992.1| (Z97339) DEF (CLA1) protein [Arabidopsis th... 540 e-152
sp|P26242|DXS_RHOCA PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SY... 539 e-152
emb|CAA74713| (Y14333) transketolase [Arabidopsis thaliana] 538 e-152
sp|Q38854|CLA1_ARATH PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE S... 538 e-152
emb|CAA09804| (AJ011840) 1-deoxyxylulose 5-phosphate syntha... 533 e-150
gi|3114573 (AF019383) 1-deoxyxylulose-5-phosphate synthase ... 533 e-150
emb|CAA07554| (AJ007559) 1-deoxy-D-xylulose-5-phosphate syn... 522 e-147
gb|AAF11042.1|AE001992_2 (AE001992) 1-deoxy-D-xylulose-5-ph... 519 e-146
gb|AAD36833.1|AE001815_7 (AE001815) 1-deoxyxylulose-5-phosp... 517 e-145
gi|3323137 (AE001253) transketolase B (tktB) [Treponema pal... 498 e-140
gi|4154849 (AE001468) 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE ... 474 e-133
gb|AAD07422.1| (AE000552) deoxyxylulose-5-phosphate synthas... 473 e-132
gb|AAD19197| (AE001686) Transketolase [Chlamydia pneumoniae] 453 e-126
sp|O07184|DXS_MYCTU PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SY... 435 e-121
gb|AAC67926.1| (AE001306) Transketolase [Chlamydia trachoma... 432 e-120
emb|CAB39701.1| (AL049485) probable transketolase [Streptom... 432 e-120
sp|Q50000|DXS_MYCLE PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SY... 421 e-117
gi|699189 (U15181) transketolase [Mycobacterium leprae] 421 e-117
dbj|BAA85847.1| (AB026631) 1-deoxy-D-xylulose 5-phosphate s... 409 e-113
dbj|BAA83576.1| (AP000399) ESTs AU078063(S15496),C97608(C60... 400 e-110
emb|CAA15764| (AL009198) hypothetical protein Rv3379c [Myco... 322 5e-87
emb|CAA58311| (X83392) hypothetical protein [Roseobacter de... 315 6e-85
dbj|BAA76702.1| (AB023411) Orf462d [Deinococcus radiodurans] 265 1e-69
emb|CAA15790| (AL009199) hypothetical protein SC7B7.10 [Str... 262 5e-69
emb|CAA19225| (AL023702) hypothetical protein SC1C3.01 [Str... 218 1e-55
gb|AAD03740.2| (AF111814) 1-deoxy-D-xylulose 5-phosphate sy... 190 4e-47
gi|4139262 (AF111814) 1-deoxy-D-xylulose 5-phosphate syntha... 190 4e-47
sp|Q58092|TKTC_METJA PUTATIVE TRANSKETOLASE C-TERMINAL SECT... 178 1e-43
emb|CAB49368.1| (AJ248284) transketolase C-TERMINAL SECTION... 157 3e-37
sp|P55573|Y4MN_RHISN HYPOTHETICAL TRANSKETOLASE FAMILY PROT... 157 3e-37
gb|AAD36826.1|AE001814_8 (AE001814) transketolase, putative... 143 3e-33
emb|CAA22034| (AL033505) transketolase [Streptomyces coelic... 134 3e-30
dbj|BAA79551.1| (AP000060) 322aa long hypothetical transket... 129 9e-29
ref|NP_001055.1|| transketolase (Wernicke-Korsakoff syndrom... 120 3e-26
gi|388891 (L12711) transketolase [Homo sapiens] 120 3e-26
gb|AAD56390.1|AF182286_1 (AF182286) 1-deoxy-D-xylulose-5-ph... 120 5e-26
pir||A45050 transketolase (EC 2.2.1.1) - human >gi|37267|em... 117 2e-25
sp|P50137|TKT_RAT TRANSKETOLASE (TK) 116 7e-25
gi|485267 (U09256) transketolase [Rattus norvegicus] 116 7e-25
ref|NP_033414.1|| transketolase >gi|730956|sp|P40142|TKT_MO... 114 3e-24
emb|CAB02889.1| (Z81055) predicted using Genefinder; Simila... 107 3e-22
dbj|BAA74730| (AB016786) transketolase [Ascidia sydneiensis... 106 8e-22
dbj|BAA76950.1| (AB020784) orf641 [Rhodovulum sulfidophilum] 99 1e-19
pir||PH0845 transketolase (EC 2.2.1.1) - human (fragment) 98 2e-19
sp|P51854|TKT2_HUMAN TRANSKETOLASE 2 (TK 2) (TRANSKETOLASE ... 93 6e-18
emb|CAA73385| (Y12884) pyruvate dehydrogenase beta2 subunit... 85 2e-15
gi|3089613 (AF086791) pyruvate dehydrogenase beta subunit [... 84 4e-15
sp|P49432|ODPB_RAT PYRUVATE DEHYDROGENASE E1 COMPONENT BETA... 80 4e-14
prf||1917268B pyruvate dehydrogenase:SUBUNIT=beta [Sus scro... 80 5e-14
ref|NP_000916.1|| pyruvate dehydrogenase (lipoamide) beta >... 80 5e-14
gb|AAF24307.1| (AF195122) Orf641 [Rhodobacter sphaeroides] 80 7e-14
emb|CAB56017.1| (AL117618) hypothetical protein [Homo sapiens] 80 7e-14
gi|387010 (M34056) pyruvate dehydrogenase E1-beta subunit p... 79 1e-13
sp|P11177|ODPB_HUMAN PYRUVATE DEHYDROGENASE E1 COMPONENT BE... 79 1e-13
pir||DEHUPB pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1)... 79 1e-13
pir||I40791 TPP-dependent acetoin dehydrogenase beta chain ... 77 4e-13
gb|AAC72192| (AF069908) pyruvate dehydrogenase E1 beta subu... 75 1e-12
gb|AAC72193| (AF069909) pyruvate dehydrogenase E1 beta subu... 75 2e-12
gi|397642 (U00985) acetoin:DCPIP oxidoreductase beta subuni... 75 2e-12
sp|P52904|ODPB_PEA PYRUVATE DEHYDROGENASE E1 COMPONENT BETA... 75 2e-12
pir||JC5089 pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1)... 74 3e-12
sp|Q38799|ODPB_ARATH PYRUVATE DEHYDROGENASE E1 COMPONENT BE... 74 3e-12
gb|AAC72194| (AF069910) pyruvate dehydrogenase E1 beta subu... 73 5e-12
pir||JC5088 pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1)... 73 7e-12
sp|P21874|ODPB_BACST PYRUVATE DEHYDROGENASE E1 COMPONENT, B... 71 3e-11
dbj|BAA80675.1| (AP000062) 325aa long hypothetical pyruvate... 71 4e-11
gi|2792344 (AF040571) transketolase [Amycolatopsis mediterr... 70 6e-11
sp|P37941|ODBB_BACSU 2-OXOISOVALERATE DEHYDROGENASE BETA SU... 70 6e-11
sp|P26269|ODPB_ASCSU PYRUVATE DEHYDROGENASE E1 COMPONENT BE... 69 8e-11
pir||C36953 acetoin-2,6-dichlorophenolindophenol oxidoreduc... 69 8e-11
sp|P35488|ODPB_ACHLA PYRUVATE DEHYDROGENASE E1 COMPONENT, B... 68 2e-10
sp|Q09171|ODPB_SCHPO PYRUVATE DEHYDROGENASE E1 COMPONENT BE... 68 3e-10
ref|NP_009780.1|PDB1| beta subunit of pyruvate dehydrogenas... 67 5e-10
sp|P45694|TKT_BACSU TRANSKETOLASE >gi|1405446|emb|CAA97616|... 66 7e-10
gi|171429 (M98476) pyruvate dehydrogenase E1-beta subunit [... 66 7e-10
gb|AAD34203.1|AF068743_2 (AF068743) pyruvate decarboxylase ... 66 1e-09
gi|624140 (U17169) E1-beta branched-chain alpha keto acid d... 65 2e-09
gi|2338700 (AF013755) pyruvate dehydrogenase testis-specifi... 65 2e-09
gb|AAF09622.1|AE001866_9 (AE001866) 2-oxo acid dehydrogenas... 64 5e-09
sp|P21882|ODPB_BACSU PYRUVATE DEHYDROGENASE E1 COMPONENT, B... 64 5e-09
ref|NP_009675.1|TKL2| transketolase, homologous to tkl1; Tk... 63 6e-09
emb|CAB01970.1| (Z79695) Similarity to Human 2-oxoisovalera... 61 2e-08
emb|CAA14724| (AJ235271) PYRUVATE DEHYDROGENASE E1 COMPONEN... 61 2e-08
emb|CAB46953.1| (AL096822) putative branched-chain alpha ke... 61 3e-08
gi|4204270 (AC005223) branched-chain alpha-keto acid decarb... 61 3e-08
gi|3746568 (AF061638) branched-chain alpha-keto acid decarb... 61 3e-08
sp|P27746|ACOB_ALCEU ACETOIN:2,6-DICHLOROPHENOLINDOPHENOL O... 61 3e-08
gb|AAC05583.1| (AF006075) TPP-dependent acetoin dehydrogena... 59 2e-07
gb|AAF04588.1|AF190792_2 (AF190792) pyruvate dehydrogenase ... 58 2e-07
sp|P29277|TKT_RHOSH TRANSKETOLASE (TK) >gi|279498|pir||XJRF... 58 3e-07
emb|CAB50760.1| (AL096839) probable transketolase [Streptom... 57 3e-07
gi|2983421 (AE000712) hypothetical protein [Aquifex aeolicus]
Length = 628
Score = 1278 bits (3270), Expect = 0.0
Identities = 628/628 (100%), Positives = 628/628 (100%)
Query: 1 MLEKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIAL 60
MLEKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIAL
Sbjct: 1 MLEKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIAL 60
Query: 61 LRVFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHS 120
LRVFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHS
Sbjct: 61 LRVFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHS 120
Query: 121 STSISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDN 180
STSISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDN
Sbjct: 121 STSISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDN 180
Query: 181 EMSISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPG 240
EMSISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPG
Sbjct: 181 EMSISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPG 240
Query: 241 VIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHG 300
VIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHG
Sbjct: 241 VIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHG 300
Query: 301 VAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPD 360
VAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPD
Sbjct: 301 VAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPD 360
Query: 361 RFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRA 420
RFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRA
Sbjct: 361 RFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRA 420
Query: 421 GLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAY 480
GLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAY
Sbjct: 421 GLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAY 480
Query: 481 GVPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKP 540
GVPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKP
Sbjct: 481 GVPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKP 540
Query: 541 MDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQ 600
MDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQ
Sbjct: 541 MDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQ 600
Query: 601 DILRNLVGIDAEGIEKAVRDALKGGRLI 628
DILRNLVGIDAEGIEKAVRDALKGGRLI
Sbjct: 601 DILRNLVGIDAEGIEKAVRDALKGGRLI 628
sp|P77488|DXS_ECOLI 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE) >gi|1773104
(U82664) similar to H. influenzae HI1439 [Escherichia
coli] >gi|1786622 (AE000148) 1-deoxyxylulose-5-phosphate
synthase; flavoprotein [Escherichia coli] >gi|2665586
(AF035440) D-1-deoxyxylulose 5-phosphate synthase
[Escherichia coli]
Length = 620
Score = 601 bits (1532), Expect = e-171
Identities = 307/621 (49%), Positives = 417/621 (66%), Gaps = 12/621 (1%)
Query: 2 LEKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALL 61
+ KY L +++ E+L KL E+R Y+++ S++ GH LG VELT+AL
Sbjct: 5 IAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVALH 64
Query: 62 RVFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSS 121
V+N P D ++WD+GHQ YP KILT R+++ T+RQ G+ F R ES YD GHSS
Sbjct: 65 YVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHSS 124
Query: 122 TSISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNE 181
TSISA +G + + +G K + VIGDGA+TAGMA+EA+N+AG IRPD +VILNDNE
Sbjct: 125 TSISAGIGIAVAAEKEG-KNRRTVCVIGDGAITAGMAFEAMNHAGDIRPD-MLVILNDNE 182
Query: 182 MSISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLR-IMKLTEEFLKGLISPG 240
MSIS NVGA++ +L +++SG R+ K G P++ ++K TEE +KG++ PG
Sbjct: 183 MSISENVGALNNHLAQLLSGKLYSSLREGGKKVFS--GVPPIKELLKRTEEHIKGMVVPG 240
Query: 241 VIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHG 300
+FEELGFNYIGP+DGHD+ L TL N++D+KGP LH+ TKKG+GY+PAE++P+ +H
Sbjct: 241 TLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA 300
Query: 301 VAPYKVESGEIIKKSSP-PTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
V + SG + K S P+++ +FG L E A +D K++AITPAMREGSG+VEF+++FP
Sbjct: 301 VPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFP 360
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
DR+FDV IAEQHA TFAAGLA G +P+ A YSTFLQRAYDQV+HDVA+Q LPV FAIDR
Sbjct: 361 DRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDR 420
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGA 478
AG+VG DG TH G FDLSYLRC+P MV+ P DE E R +LYTG Y+ P A+RYPRG
Sbjct: 421 AGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGN 480
Query: 479 AYGVPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFV 538
A GV +K+ IG GE IL G + +A + AE L +V+ RFV
Sbjct: 481 AVGVELTPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVAESL-----NATLVDMRFV 535
Query: 539 KPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHG 598
KP+DE ++ ++A ++ +TVE+N ++GG GSGV E V+N+G+PD FI G
Sbjct: 536 KPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQG 595
Query: 599 KQDILRNLVGIDAEGIEKAVR 619
Q+ +R +G+DA G+E ++
Sbjct: 596 TQEEMRAELGLDAAGMEAKIK 616
sp|P45205|DXS_HAEIN 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE)
>gi|1074781|pir||B64172 hypothetical protein HI1439 -
Haemophilus influenzae (strain Rd KW20) >gi|1574278
(U32822) 1-deoxyxylulose-5-phosphate synthase (dxs)
{Escherichia coli) [Haemophilus influenzae Rd]
Length = 625
Score = 594 bits (1514), Expect = e-169
Identities = 309/620 (49%), Positives = 408/620 (64%), Gaps = 12/620 (1%)
Query: 2 LEKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALL 61
+ Y +L P D++ + + L +L QE+R Y++ S+ GH+ LG VELT+AL
Sbjct: 5 MNNYPLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALH 64
Query: 62 RVFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSS 121
V+ P D ++WD+GHQ YP KILT R+EQ T+RQ GI F REES +D GHSS
Sbjct: 65 YVYKTPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSS 124
Query: 122 TSISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNE 181
TSISA LG + + + + VIGDGA+TAGMA+EALN+AG + D +VILNDNE
Sbjct: 125 TSISAGLGIAVAAERENAGRK-TVCVIGDGAITAGMAFEALNHAGALHTD-MLVILNDNE 182
Query: 182 MSISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLR-IMKLTEEFLKGLI-SP 239
MSIS NVGA++ +L RI SG R K L P++ MK TEE +KG++ SP
Sbjct: 183 MSISENVGALNNHLARIFSGSLYSTLRDGSKKILDKV--PPIKNFMKKTEEHMKGVMFSP 240
Query: 240 -GVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKW 298
+FEELGFNYIGP+DGH+I L TL N++++KGP LH+ TKKGKGY PAE++P+ +
Sbjct: 241 ESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLKGPQFLHIKTKKGKGYAPAEKDPIGF 300
Query: 299 HGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRF 358
HGV + SGE+ K +S PT++ +FG L E+AE+D KI+ ITPAMREGSG+VEF++RF
Sbjct: 301 HGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRF 360
Query: 359 PDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAID 418
P ++FDV IAEQHA TFA GLA G +PV A YSTFLQRAYDQ+IHDVA+QNLPV FAID
Sbjct: 361 PKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAID 420
Query: 419 RAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGA 478
RAG+VG DG TH G FD+S++RC+PNM++ P DE E R +LYTG GKP A+RYPRG
Sbjct: 421 RAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQCGKPAAVRYPRGN 480
Query: 479 AYGVPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFV 538
A GV + + IG + +G+ IL G + AL +EKL VV+ RFV
Sbjct: 481 AVGVKLTPLEMLPIGKSRLIRKGQKIAILNFGTLLPSALELSEKL-----NATVVDMRFV 535
Query: 539 KPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHG 598
KP+D +M+ LA +D +T+E+N + GG GS V E G ++ LG+PD FI
Sbjct: 536 KPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLGLPDYFIPQA 595
Query: 599 KQDILRNLVGIDAEGIEKAV 618
Q +G+D +GIE+ +
Sbjct: 596 TQQEALADLGLDTKGIEEKI 615
sp|P54523|DXS_BACSU PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE)
>gi|1303920|dbj|BAA12576| (D84432) YqiE [Bacillus
subtilis] >gi|2634861|emb|CAB14358| (Z99116) similar to
hypothetical proteins [Bacillus subtilis]
Length = 633
Score = 590 bits (1504), Expect = e-167
Identities = 303/620 (48%), Positives = 408/620 (64%), Gaps = 10/620 (1%)
Query: 8 LKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPP 67
L + P +KN + L+KL+ E+R ++I S +GGH+GP+LGVVELT+AL + FN P
Sbjct: 3 LLSIQDPSFLKNMSIDELEKLSDEIRQFLITSLSASGGHIGPNLGVVELTVALHKEFNSP 62
Query: 68 EDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAA 127
+D +WD+GHQ Y K+LT R ++F TLRQYKG+ GF +R ES +D + GHSSTS+S A
Sbjct: 63 KDKFLWDVGHQSYVHKLLTGRGKEFATLRQYKGLCGFPKRSESEHDVWETGHSSTSLSGA 122
Query: 128 LGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPN 187
+G +D+KG E Y+I +IGDGALT GMA EALN+ G + D IVILNDNEMSI+PN
Sbjct: 123 MGMAAARDIKGTDE-YIIPIIGDGALTGGMALEALNHIGDEKKD-MIVILNDNEMSIAPN 180
Query: 188 VGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTE---EFLKGLISPGVIFE 244
VGAI + L R+ + Q + +++ + ++ E + LK ++ G+ FE
Sbjct: 181 VGAIHSMLGRLRTAGKYQWVKDELEYLFKKIPAVGGKLAATAERVKDSLKYMLVSGMFFE 240
Query: 245 ELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPV-KWHGVAP 303
ELGF Y+GP+DGH L + L K KGPVLLHV TKKGKGYKPAE + + WHG P
Sbjct: 241 ELGFTYLGPVDGHSYHELIENLQYAKKTKGPVLLHVITKKGKGYKPAETDTIGTWHGTGP 300
Query: 304 YKVESGEIIK-KSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRF 362
YK+ +G+ +K K++ P+W+ + + +A D +IVAITPAM GS L FAK FPDR
Sbjct: 301 YKINTGDFVKPKAAAPSWSGLVSGTVQRMAREDGRIVAITPAMPVGSKLEGFAKEFPDRM 360
Query: 363 FDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGL 422
FDVGIAEQHA T AA +A +G++P A YSTFLQRAYDQV+HD+ QN V IDRAGL
Sbjct: 361 FDVGIAEQHAATMAAAMAMQGMKPFLAIYSTFLQRAYDQVVHDICRQNANVFIGIDRAGL 420
Query: 423 VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGAAYG 481
VG DG TH GVFD++++R +PNMV+ PKDE E + +++T + Y P A+R+PRG G
Sbjct: 421 VGADGETHQGVFDIAFMRHIPNMVLMMPKDENEGQHMVHTALSYDEGPIAMRFPRGNGLG 480
Query: 482 VP-TEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKP 540
V E K I IGTWE L G D VIL G + A+ AAE+L KEG+ V VVNARF+KP
Sbjct: 481 VKMDEQLKTIPIGTWEVLRPGNDAVILTFGTTIEMAIEAAEELQKEGLSVRVVNARFIKP 540
Query: 541 MDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVIN-LGVPDRFIEHGK 599
+DEKM++ + +T+E+ + GGFGS +LEF +G I+ +G+PDRFIEHG
Sbjct: 541 IDEKMMKSILKEGLPILTIEEAVLEGGFGSSILEFAHDQGEYHTPIDRMGIPDRFIEHGS 600
Query: 600 QDILRNLVGIDAEGIEKAVR 619
L +G+ + + +R
Sbjct: 601 VTALLEEIGLTKQQVANRIR 620
sp|P73067|DXS_SYNY3 PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE)
>gi|1652165|dbj|BAA17089| (D90903) hypothetical protein
[Synechocystis sp.]
Length = 640
Score = 571 bits (1457), Expect = e-162
Identities = 285/594 (47%), Positives = 400/594 (66%), Gaps = 11/594 (1%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P ++K L+++++++R+ + + +GGH+GP LGVVELT+AL + +D ++W
Sbjct: 9 PNELKGLSIRELEEVSRQIREKHLQTVATSGGHLGPGLGVVELTVALYSTLDLDKDRVIW 68
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIG 133
D+GHQ YP K+LT R F TLRQ G++G+L+R ES +D FGAGH+STSISA LG +
Sbjct: 69 DVGHQAYPHKMLTGRYHDFHTLRQKDGVAGYLKRSESRFDHFGAGHASTSISAGLGMALA 128
Query: 134 KDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAIST 193
+D KGE + V+++IGDGALT GMA EA+N+AGH+ R +VILNDNEMSISPNVGAIS
Sbjct: 129 RDAKGE-DFKVVSIIGDGALTGGMALEAINHAGHLPHTRLMVILNDNEMSISPNVGAISR 187
Query: 194 YLNRIISGHFVQETRQKIKNFLQHF---GETPLRIMKLTEEFLKGLISP--GVIFEELGF 248
YLN++ +Q ++ ++H G++ M+ +E +K L+ P G + EELGF
Sbjct: 188 YLNKVRLSSPMQFLTDNLEEQIKHLPFVGDSLTPEMERVKEGMKRLVVPKVGAVIEELGF 247
Query: 249 NYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGVAPYKVES 308
Y GPIDGH ++ L DT + + GPV +HV T KGKGY AE++ V +H +P+ + +
Sbjct: 248 KYFGPIDGHSLQELIDTFKQAEKVPGPVFVHVSTTKGKGYDLAEKDQVGYHAQSPFNLST 307
Query: 309 GEII--KKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVG 366
G+ K PP+++ VF L LA+ + IV IT AM G+GL + + P ++ DVG
Sbjct: 308 GKAYPSSKPKPPSYSKVFAHTLTTLAKENPNIVGITAAMATGTGLDKLQAKLPKQYVDVG 367
Query: 367 IAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDD 426
IAEQHA T AAG+A EG+RPV A YSTFLQR YDQ+IHDV +Q LPV F +DRAG+VG D
Sbjct: 368 IAEQHAVTLAAGMACEGIRPVVAIYSTFLQRGYDQIIHDVCIQKLPVFFCLDRAGIVGAD 427
Query: 427 GPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGAAYGVP-- 483
GPTH G++D++YLRC+PN+V+ APKDE EL+ +L TG+ Y+G A+RYPRG GVP
Sbjct: 428 GPTHQGMYDIAYLRCIPNLVLMAPKDEAELQQMLVTGVNYTGGAIAMRYPRGNGIGVPLM 487
Query: 484 TEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDE 543
EG++ +EIG E L G+D ++L G VY AL+ AE L++ GI VVNARFVKP+D
Sbjct: 488 EEGWEPLEIGKAEILRSGDDVLLLGYGSMVYPALQTAELLHEHGIEATVVNARFVKPLDT 547
Query: 544 KMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEH 597
+++ LA R +T+E+ ++GGFGS V E ++ + LGVPD ++H
Sbjct: 548 ELILPLAERIGKVVTMEEGCLMGGFGSAVAEALMDNNVLVPLKRLGVPDILVDH 601
emb|CAB60078.1| (Y18874) 1-deoxy-xylulose 5-phosphate synthase [Synechococcus
PCC6301]
Length = 636
Score = 550 bits (1401), Expect = e-155
Identities = 283/612 (46%), Positives = 392/612 (63%), Gaps = 12/612 (1%)
Query: 8 LKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPP 67
L + P + L+++ ++R+ + + GGH+GP LGVVELT+AL + +
Sbjct: 3 LSEITHPNQLHGLSVAQLEQIGHQIREKHLQTVAATGGHLGPGLGVVELTLALYQTLDLD 62
Query: 68 EDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAA 127
D +VWD+GHQ YP K+LT R F TLRQ GI+G+ +R E+ +D FGAGH+STSISA
Sbjct: 63 RDKVVWDVGHQAYPHKLLTGRYHNFHTLRQKDGIAGYPKRTENRFDHFGAGHASTSISAG 122
Query: 128 LGFRIGKDLKGEKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
LG + +D +GE DY +AVIGDG+LT GMA EA+N+AGH+ R +V+LNDN+MSISP
Sbjct: 123 LGMALARDAQGE--DYRCVAVIGDGSLTGGMALEAINHAGHLPKTRLLVVLNDNDMSISP 180
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGL-----ISPGV 241
NVGA+S YLN+I +Q + +Q I + E +G+ G
Sbjct: 181 NVGALSRYLNKIRVSEPMQLLTDGLTQGMQQIPFVGGAITQGFEPVKEGMKRLSYSKIGA 240
Query: 242 IFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGV 301
+FEELGF Y+GP+DGH+++ L T GPVL+HV T KGKGY AEE+ V +H
Sbjct: 241 VFEELGFTYMGPVDGHNLEELIATFREAHKHTGPVLVHVATTKGKGYPYAEEDQVGYHAQ 300
Query: 302 APYKVESGEI--IKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
P+ + +G+ K PP+++ VFG+ L LA+ D +IV IT AM G+GL K P
Sbjct: 301 NPFDLATGKAKPASKPKPPSYSKVFGQTLTTLAKSDRRIVGITAAMATGTGLDILQKALP 360
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
++ DVGIAEQHA AAG+A +G+RPV A YSTFLQRA+DQVIHDV +Q LPV F +DR
Sbjct: 361 KQYIDVGIAEQHAVVLAAGMACDGMRPVVAIYSTFLQRAFDQVIHDVCIQKLPVFFCLDR 420
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAA 479
AG+VG DGPTH G++D++YLR +PNMV+ APKDE EL+ +L TGI P A+R+PRG
Sbjct: 421 AGIVGADGPTHQGMYDIAYLRLIPNMVLMAPKDEAELQRMLVTGIEYDGPIAMRFPRGNG 480
Query: 480 YGV--PTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARF 537
GV P EG++ + IG E+L +G+D ++LA G VY AL+ AE L + GI V+NARF
Sbjct: 481 IGVPLPEEGWESLPIGKAEQLRQGDDLLMLAYGSMVYPALQTAELLNEHGISATVINARF 540
Query: 538 VKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEH 597
KP+DE+++ LA + +T E+ + GGFGS ++E + V+ +GVPD +EH
Sbjct: 541 AKPLDEELIVPLARQIGKVVTFEEGCLPGGFGSAIMESLQAHDLQVPVLPIGVPDLLVEH 600
Query: 598 GKQDILRNLVGI 609
D + +G+
Sbjct: 601 ASPDESKQELGL 612
sp|O22567|CLA1_ORYSA PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE)
>gi|2612941 (AF024512) CLA1 transketolase-like protein
[Oryza sativa]
Length = 594
Score = 548 bits (1396), Expect = e-155
Identities = 294/587 (50%), Positives = 393/587 (66%), Gaps = 21/587 (3%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P +KN + LQ+LA E+R +I SK GGH+G SLGVVELT+AL VFN P+D I+W
Sbjct: 3 PIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKILW 62
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIG 133
D+GHQ YP KILT R+++ PT+RQ G+SGF +R ES YD+FG GHSST+ISAALG +G
Sbjct: 63 DVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVG 122
Query: 134 KDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEM---------SI 184
+DLKG K + V+AVIGDGA+TAG AYEA+NNAG++ D IVILNDN+
Sbjct: 123 RDLKGGKNN-VVAVIGDGAMTAGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGP 180
Query: 185 SPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPG--VI 242
+P VGA+S+ L+++ S ++E R+ K + G + + +E+ +G+IS +
Sbjct: 181 APPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTL 240
Query: 243 FEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHG 300
FEELG YIGP+DGH+I L L VK K GPVL+HV T+KG+GY AE K+HG
Sbjct: 241 FEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHG 300
Query: 301 VAPYKVESGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
VA + +G+ K + ++T+ F +AL+ AE+D ++VAI AM G+GL F +RFP
Sbjct: 301 VAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFP 360
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
+R FDVGIAEQHA TFAAGLA EGL+P A YS+FLQR YDQV+HDV LQ LPV FA+DR
Sbjct: 361 NRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 420
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GIYSGKPFALRYPRGA 478
AGLVG DGPTH G FD++Y+ C+PNMVV AP DE EL ++ T +P RYPRG
Sbjct: 421 AGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGN 480
Query: 479 AYGVPTEGFKK---IEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNA 535
GVP K +E+G LLEGE +L G V L AA + + G++V V +A
Sbjct: 481 GIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADA 540
Query: 536 RFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIM 582
RF KP+D+ ++R LA+ ++ +TVE+ + +GGFGS V +F A +G++
Sbjct: 541 RFCKPLDQTLIRRLASSHEVLLTVEEGS-IGGFGSHVAQFMALDGLL 586
emb|CAA75778| (Y15782) transketolase 2 [Capsicum annuum]
Length = 719
Score = 541 bits (1380), Expect = e-153
Identities = 298/606 (49%), Positives = 396/606 (65%), Gaps = 24/606 (3%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P +KN + L++LA E+R I SK GGH+G SLGVVELT+AL VFN P+D I+W
Sbjct: 82 PIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILW 141
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIG 133
D+GHQ YP KILT R+E+ TLRQ G++GF +R ES YD FG GHSST+ISA LG +G
Sbjct: 142 DVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVG 201
Query: 134 KDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDN-EMSIS------- 185
+DLKG + VIAVIGDGA+TAG AYEA+NNAG++ D IVILNDN ++S+
Sbjct: 202 RDLKGRNNN-VIAVIGDGAMTAGQAYEAMNNAGYLDSD-MIVILNDNRQVSLPTATLDGP 259
Query: 186 -PNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPG--VI 242
P VGA+S+ L+R+ S ++E R+ K + G + +E+ +G+IS +
Sbjct: 260 VPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL 319
Query: 243 FEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHG 300
FEELG YIGP+DGH+I L L V+ K GPVL+HV T+KG+GY AE K+HG
Sbjct: 320 FEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHG 379
Query: 301 VAPYKVESGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
VA + +G+ K S+ ++T+ F +AL+ AE D+ IVAI AM G+G+ F +RFP
Sbjct: 380 VAKFDPATGKQFKGSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFP 439
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
R FDVGIAEQHA TFAAGLA EGL+P A YS+F+QRAYDQV+HDV LQ LPV FA+DR
Sbjct: 440 TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDR 499
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GIYSGKPFALRYPRGA 478
AGLVG DGPTH G FD++++ C+PNMVV AP DE EL ++ T +P RYPRG
Sbjct: 500 AGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRGN 559
Query: 479 AYGVPTEGFKK---IEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNA 535
GV K +E+G L+EGE +L G V L AA L G++V V +A
Sbjct: 560 GIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADA 619
Query: 536 RFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVIN---LGVPD 592
RF KP+D ++R LA ++ +TVE + +GGFGS V++F A +G++ + + +PD
Sbjct: 620 RFCKPLDRALIRSLAKSHEVLVTVEKGS-IGGFGSHVVQFMALDGLLDGKLKWRPIVLPD 678
Query: 593 RFIEHG 598
R+I+HG
Sbjct: 679 RYIDHG 684
gb|AAD38941.1|AF143812_1 (AF143812) 1-D-deoxyxylulose 5-phosphate synthase [Lycopersicon
esculentum]
Length = 719
Score = 541 bits (1378), Expect = e-153
Identities = 299/613 (48%), Positives = 395/613 (63%), Gaps = 24/613 (3%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
IL P +KN + L++LA E+R I SK GGH+G SLGVVELT+AL VFN
Sbjct: 75 ILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNA 134
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P+D I+WD+GHQ YP KILT R+++ TLRQ G++GF +R ES YD FG GHSST+ISA
Sbjct: 135 PQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISA 194
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
LG +G+DLKG + VIAVIGDGA+TAG AYEA+NNAG++ D IVILNDN P
Sbjct: 195 GLGMAVGRDLKGRNNN-VIAVIGDGAMTAGQAYEAMNNAGYLDSD-MIVILNDNRQVSLP 252
Query: 187 N---------VGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLI 237
VGA+S+ L+R+ S ++E R+ K + G + +E+ +G+I
Sbjct: 253 TATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 312
Query: 238 SPG--VIFEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEE 293
S +FEELG YIGP+DGH+I L L V+ K GPVL+HV T+KG+GY AE
Sbjct: 313 SGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVRSTKTTGPVLIHVVTEKGRGYPYAER 372
Query: 294 NPVKWHGVAPYKVESGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLV 352
K+HGVA + +G+ K S+ ++T+ F +AL+ AE D+ IVAI AM G+G+
Sbjct: 373 AADKYHGVAKFDPATGKQFKASAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMN 432
Query: 353 EFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLP 412
F +RFP R FDVGIAEQHA TFAAGLA EG++P A YS+F+QRAYDQV+HDV LQ LP
Sbjct: 433 LFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLP 492
Query: 413 VTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GIYSGKPFA 471
V FA+DRAGLVG DGPTH G FD++Y+ C+PNMVV AP DE EL ++ T +P
Sbjct: 493 VRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 552
Query: 472 LRYPRGAAYGVPTEGFKK---IEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGI 528
RYPRG GV K +E+G L+EGE +L G V L AA L G+
Sbjct: 553 FRYPRGNGIGVELPAGNKGIPLEVGKGRILIEGERVALLGYGSAVQNCLDAAIVLESRGL 612
Query: 529 RVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVIN- 587
+V V +ARF KP+D ++R LA ++ ITVE+ + +GGFGS V++F A +G++ +
Sbjct: 613 QVTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFMALDGLLDGKLKW 671
Query: 588 --LGVPDRFIEHG 598
+ +PDR+I+HG
Sbjct: 672 RPIVLPDRYIDHG 684
emb|CAB45992.1| (Z97339) DEF (CLA1) protein [Arabidopsis thaliana]
Length = 717
Score = 540 bits (1377), Expect = e-152
Identities = 295/606 (48%), Positives = 397/606 (64%), Gaps = 24/606 (3%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P +KN + L++L+ E+R +I SK GGH+G SLGVVELT+AL +FN P+D I+W
Sbjct: 83 PIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILW 142
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIG 133
D+GHQ YP KILT R+ + PT+RQ G+SGF +R ES +D FG GHSST+ISA LG +G
Sbjct: 143 DVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVG 202
Query: 134 KDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEM---------SI 184
+DLKG K + V+AVIGDGA+TAG AYEA+NNAG++ D IVILNDN+
Sbjct: 203 RDLKG-KNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGP 260
Query: 185 SPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISP--GVI 242
SP VGA+S+ L+R+ S ++E R+ K + G ++ +E+ +G+IS +
Sbjct: 261 SPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSL 320
Query: 243 FEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHG 300
FEELG YIGP+DGH+I L L VK + GPVL+HV T+KG+GY AE K+HG
Sbjct: 321 FEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHG 380
Query: 301 VAPYKVESGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
V + +G K ++ ++T+ F +ALV AE D+ +VAI AM G+GL F +RFP
Sbjct: 381 VVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFP 440
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
R FDVGIAEQHA TFAAGLA EGL+P A YS+F+QRAYDQV+HDV LQ LPV FA+DR
Sbjct: 441 TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDR 500
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGA 478
AGLVG DGPTH G FD++++ C+PNM+V AP DE +L +++ T + +P RYPRG
Sbjct: 501 AGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGN 560
Query: 479 AYGV---PTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNA 535
GV P IEIG L EGE +L G V L AA L + G+ V V +A
Sbjct: 561 GIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADA 620
Query: 536 RFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVIN---LGVPD 592
RF KP+D ++R LA ++ ITVE+ + +GGFGS V++F A +G++ + + +PD
Sbjct: 621 RFCKPLDRALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLALDGLLDGKLKWRPMVLPD 679
Query: 593 RFIEHG 598
R+I+HG
Sbjct: 680 RYIDHG 685
sp|P26242|DXS_RHOCA PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE)
(PROTEIN C2814) >gi|79486|pir||G28771 hypothetical
protein C2814 (photosynthetic gene cluster) -
Rhodobacter capsulatus >gi|46140|emb|CAA77557.1|
(Z11165) 641 aa (68 kD) gene product of ORF641
[Rhodobacter capsulatus]
Length = 641
Score = 539 bits (1373), Expect = e-152
Identities = 303/625 (48%), Positives = 395/625 (62%), Gaps = 14/625 (2%)
Query: 13 GPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIV 72
GP D+K L LA EVR I+ V S+ GGH+G SLGVVELT+AL VFN P D ++
Sbjct: 16 GPADLKAMSIADLTALASEVRREIVEVVSQTGGHLGSSLGVVELTVALHAVFNSPGDKLI 75
Query: 73 WDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRI 132
WD+GHQ YP KILT R+ + TLRQ GISGF +R ES +DAFGAGHSSTSISAALGF +
Sbjct: 76 WDVGHQCYPHKILTGRRSRMLTLRQAGGISGFPKRSESPHDAFGAGHSSTSISAALGFAV 135
Query: 133 GKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAIS 192
G++L G+ IA+IGDG++TAGMAYEALN+AGH++ R VILNDN+MSI+P VGA+
Sbjct: 136 GREL-GQPVGDTIAIIGDGSITAGMAYEALNHAGHLK-SRMFVILNDNDMSIAPPVGALQ 193
Query: 193 TYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEELGFNYIG 252
YLN I + + H + + + + +FEELGF+YIG
Sbjct: 194 HYLNTIARQAPFAALKAAAEGIEMHLPGPVRDGARRARQMVTAMPGGATLFEELGFDYIG 253
Query: 253 PIDGHDIKALEDTLNNVKD-IKGPVLLHVYTKKGKGYKPAEENPVKWHGVAPYKVESGEI 311
P+DGHD+ L +TL + GPVL+HV T KGKGY PAE K HGV+ + +E+G+
Sbjct: 254 PVDGHDMAELVETLRVTRARASGPVLIHVCTTKGKGYAPAEGAEDKLHGVSKFDIETGKQ 313
Query: 312 IKKSSP--PTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAE 369
KKS P P +T+VFG+ L E A RD+ IVA+T AM G+GL KRFP R FDVGIAE
Sbjct: 314 -KKSIPNAPNYTAVFGERLTEEAARDQAIVAVTAAMPTGTGLDIMQKRFPRRVFDVGIAE 372
Query: 370 QHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPT 429
QHA TFAAG+AA GL+P A YS+F+QR YDQ++HDVALQNLPV IDRAGLVG DG T
Sbjct: 373 QHAVTFAAGMAAAGLKPFLALYSSFVQRGYDQLVHDVALQNLPVRLMIDRAGLVGQDGAT 432
Query: 430 HHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GIYSGKPFALRYPRGAAYGV--PTEG 486
H G FD+S L +PN V A DE EL ++ T + P ALRYPRG GV P G
Sbjct: 433 HAGAFDVSMLANLPNFTVMAAADEAELCHMVVTAAAHDSGPIALRYPRGEGRGVEMPERG 492
Query: 487 FKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKML 546
+ +EIG + EG + IL+ G + QAL+AAE L EG+ V +ARF +P+D ++
Sbjct: 493 -EVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLI 551
Query: 547 RDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKR---VINLGVPDRFIEHGKQDIL 603
L + IT+E +GGFG+ VL + AR G +++ + + +PD +I+HG + +
Sbjct: 552 DRLIEGHAALITLEQG-AMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEM 610
Query: 604 RNLVGIDAEGIEKAVRDALKGGRLI 628
G+ A I A + + +
Sbjct: 611 YAWAGLTANDIRDTALAAARPSKSV 635
emb|CAA74713| (Y14333) transketolase [Arabidopsis thaliana]
Length = 739
Score = 538 bits (1372), Expect = e-152
Identities = 295/606 (48%), Positives = 396/606 (64%), Gaps = 24/606 (3%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P +KN + L++L+ E+R +I SK GGH+G SLGVVELT+AL +FN P+D I+W
Sbjct: 105 PIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILW 164
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIG 133
D+GHQ YP KILT R+ + PT+RQ G+SGF +R ES +D FG GHSST+ISA LG IG
Sbjct: 165 DVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAIG 224
Query: 134 KDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEM---------SI 184
+DLKG K + V+AVIGDGA+TAG AYEA+NNAG++ D IVILNDN+
Sbjct: 225 RDLKG-KNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGP 282
Query: 185 SPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISP--GVI 242
SP VGA+S+ L+R+ S ++E R+ K + G ++ + + +G+IS +
Sbjct: 283 SPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQVAAKVDVYARGMISGTGSSL 342
Query: 243 FEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHG 300
FEELG YIGP+DGH+I L L VK + GPVL+HV T+KG+GY AE K+HG
Sbjct: 343 FEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHG 402
Query: 301 VAPYKVESGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
V + +G K ++ ++T+ F +ALV AE D+ +VAI AM G+GL F +RFP
Sbjct: 403 VVKFDPATGRQFKTTNETQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFP 462
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
R FDVGIAEQHA TFAAGLA EGL+P A YS+F+QRAYDQV+HDV LQ LPV FA+DR
Sbjct: 463 TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDR 522
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGA 478
AGLVG DGPTH G FD++++ C+PNM+V AP DE +L +++ T + +P RYPRG
Sbjct: 523 AGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGN 582
Query: 479 AYGV---PTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNA 535
GV P IEIG L EGE +L G V L AA L + G+ V V +A
Sbjct: 583 GIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADA 642
Query: 536 RFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVIN---LGVPD 592
RF KP+D ++R LA ++ ITVE+ + +GGFGS V++F A +G++ + + +PD
Sbjct: 643 RFCKPLDRALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLALDGLLDGKLKWRPMVLPD 701
Query: 593 RFIEHG 598
R+I+HG
Sbjct: 702 RYIDHG 707
sp|Q38854|CLA1_ARATH PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE PRECURSOR (DXP
SYNTHASE) >gi|1399261 (U27099) DEF [Arabidopsis
thaliana]
Length = 717
Score = 538 bits (1370), Expect = e-152
Identities = 294/606 (48%), Positives = 396/606 (64%), Gaps = 24/606 (3%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P +KN + L++L+ E+R +I SK GGH+G SLGVVELT+AL +FN P+D I+W
Sbjct: 83 PIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILW 142
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIG 133
D+GHQ YP KILT R+ + PT+RQ G+SGF +R ES +D FG GHSST+ISA LG +G
Sbjct: 143 DVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVG 202
Query: 134 KDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEM---------SI 184
+DLKG K + V+AVIGDGA+TAG AYEA+NNAG++ D IVILNDN+
Sbjct: 203 RDLKG-KNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGP 260
Query: 185 SPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISP--GVI 242
SP VGA+S+ L+R+ S ++E R+ K + G ++ + + +G+IS +
Sbjct: 261 SPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQLAAKVDVYARGMISGTGSSL 320
Query: 243 FEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHG 300
FEELG YIGP+DGH+I L L VK + GPVL+HV T+KG+GY AE K+HG
Sbjct: 321 FEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHG 380
Query: 301 VAPYKVESGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
V + +G K ++ ++T+ F +ALV AE D+ +VAI AM G+GL F +RFP
Sbjct: 381 VVKFDPATGRQFKTTNETQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFP 440
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
R FDVGIAEQHA TFAAGLA EGL+P A YS+F+QRAYDQV+HDV LQ LPV FA+DR
Sbjct: 441 TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDR 500
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGA 478
AGLVG DGPTH G FD++++ C+PNM+V AP DE +L +++ T + +P RYPRG
Sbjct: 501 AGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGN 560
Query: 479 AYGV---PTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNA 535
GV P IEIG L EGE +L G V L AA L + G+ V V +A
Sbjct: 561 GIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADA 620
Query: 536 RFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVIN---LGVPD 592
RF KP+D ++R LA ++ ITVE+ + +GGFGS V++F A +G++ + + +PD
Sbjct: 621 RFCKPLDRALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLALDGLLDGKLKWRPMVLPD 679
Query: 593 RFIEHG 598
R+I+HG
Sbjct: 680 RYIDHG 685
emb|CAA09804| (AJ011840) 1-deoxyxylulose 5-phosphate synthase [Catharanthus
roseus]
Length = 716
Score = 533 bits (1357), Expect = e-150
Identities = 291/606 (48%), Positives = 389/606 (64%), Gaps = 24/606 (3%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P +KN L++LA E+R I+ +K GGH+ SLGVV+LT+AL VFN PED I+W
Sbjct: 80 PVHMKNLSAHDLEQLAAELRAEIVYSVAKTGGHLSASLGVVDLTVALHHVFNTPEDRIIW 139
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIG 133
D+GHQ YP KILT R+ + T+RQ G++GF +R+ESIYDAFGAGHSSTSISA LG +
Sbjct: 140 DVGHQAYPHKILTGRRSKMHTIRQTSGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVA 199
Query: 134 KDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPN------ 187
+D+ G K + VI+VIGDGA+TAG AYEA+NNAG + + IV+LNDN+ P
Sbjct: 200 RDILG-KNNNVISVIGDGAMTAGQAYEAMNNAGFLDAN-LIVVLNDNKQVSLPTATLDGP 257
Query: 188 ---VGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISP--GVI 242
VGA+S+ L+++ + +++ R+ K+ + G + +E+ +G++S +
Sbjct: 258 ATPVGALSSALSKLQARSKLRQLREAAKSITKQIGPQAHEVAAKVDEYARGMLSATGSTL 317
Query: 243 FEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHG 300
FEELG YIGP+DGH I+ L VK + GPVL+H+ T+KGKGY PAE K HG
Sbjct: 318 FEELGLYYIGPVDGHSIEDLVTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHG 377
Query: 301 VAPYKVESGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFP 359
V + ++G+ K SP ++T F ++L++ AE D KI+AI AM G+GL F KRFP
Sbjct: 378 VVKFDPKTGKQFKSKSPTLSYTQYFAESLIKEAEIDNKIIAIHAAMGGGTGLNYFQKRFP 437
Query: 360 DRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDR 419
DR FDVGIAEQHA TFAAGLA EGL+P A YS+FLQR YDQV+HDV LQ LPV FA+DR
Sbjct: 438 DRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 497
Query: 420 AGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGA 478
AGLVG DGPTH G FD++Y+ C+PNM+V AP DE EL ++ T +P R+PRG
Sbjct: 498 AGLVGADGPTHCGAFDVAYMACLPNMIVMAPSDEAELMHMVATAAKIDDRPCCFRFPRGN 557
Query: 479 AYGV---PTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNA 535
GV P +EIG L+EG IL G V Q L AAE L + V +A
Sbjct: 558 GIGVALPPNNKGTPLEIGKGRILVEGSRVAILGYGSIVQQCLGAAEMLKSHNVSPTVADA 617
Query: 536 RFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMK---RVINLGVPD 592
RF KP+D + + LA ++ ITVE+ + +G FGS V F + GI+ +V +L +PD
Sbjct: 618 RFCKPLDGILSKTLAKEHEILITVEEGS-IGAFGSHVTHFLSLTGILDGPIKVRSLLLPD 676
Query: 593 RFIEHG 598
R+I+HG
Sbjct: 677 RYIDHG 682
gi|3114573 (AF019383) 1-deoxyxylulose-5-phosphate synthase [Mentha x piperita]
Length = 724
Score = 533 bits (1357), Expect = e-150
Identities = 294/641 (45%), Positives = 401/641 (61%), Gaps = 24/641 (3%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
IL P +KN E L LA E+R+ I+ SK GGH+ SLGV ELT+AL VFN
Sbjct: 78 ILDTINYPNHMKNLSVEELANLADELREEIVYTVSKTGGHLSSSLGVSELTVALHHVFNT 137
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P+D I+WD+GHQ YP KILT R+ + T+RQ G++GF +R+ES +DAFGAGHSSTSISA
Sbjct: 138 PDDKIIWDVGHQAYPHKILTGRRARMHTIRQTFGLAGFPKRDESAHDAFGAGHSSTSISA 197
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEM---- 182
LG + +DL +K ++VI+VIGDGA+TAG AYEALNNAG + I++LNDN+
Sbjct: 198 GLGMAVARDLL-QKNNHVISVIGDGAMTAGQAYEALNNAGFL-DSNLIIVLNDNKQVSLP 255
Query: 183 -----SISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLI 237
+P VGA+S L ++ + ++ R+ K+ + G I +++KG++
Sbjct: 256 TATVDGPAPPVGALSKALTKLQASRKFRQLREAAKSMTKQMGAPAHEIASKLTQYVKGMM 315
Query: 238 S-PGV-IFEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEE 293
PG +FEELG YIGP+DGH+++ L VK++ GPVL+H+ T+KGKGY PAE
Sbjct: 316 GKPGASLFEELGIYYIGPVDGHNVEDLVYIFKKVKEMPAPGPVLIHIITEKGKGYPPAEI 375
Query: 294 NPVKWHGVAPYKVESGEIIK-KSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLV 352
K HGV + ++G+ +K K+ ++T F ++LV AE D+KIVAI AM G+GL
Sbjct: 376 AADKMHGVVKFDAKTGKQMKTKNKTKSYTQYFAESLVAEAEHDDKIVAIHAAMGGGTGLN 435
Query: 353 EFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLP 412
F K+FPDR FDVGIAEQHA TFAAG+AAEGL+P A YS+FLQR YDQV+HDV LQ LP
Sbjct: 436 IFQKQFPDRCFDVGIAEQHAVTFAAGMAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLP 495
Query: 413 VTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GIYSGKPFA 471
V F +DRAG+VG DGPTH G FD +Y+ C+PNMVV AP DE EL +++ T I +P
Sbjct: 496 VRFMMDRAGVVGADGPTHCGAFDTTYMACLPNMVVMAPSDEAELMNMIATAAIIDDRPSC 555
Query: 472 LRYPRGAAYGVPTEGFKK---IEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGI 528
+RYPRG GV K +EIG L EG IL G V + AA L + GI
Sbjct: 556 VRYPRGNGIGVALPSNNKGTPLEIGKGRILKEGSKVAILGFGTIVQNCMAAANLLEQHGI 615
Query: 529 RVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVIN- 587
V V +ARF KP+D +++ L ++ ITVE+ + +GGF + + F + G++ +
Sbjct: 616 SVTVADARFCKPLDGDLIKKLVQEHEVLITVEEGS-IGGFSAHISHFLSLNGLLDGNLKW 674
Query: 588 --LGVPDRFIEHGKQDILRNLVGIDAEGIEKAVRDALKGGR 626
+ +PDR+I+HG Q G+ + I V + GG+
Sbjct: 675 RPMVLPDRYIDHGAQSDQIEEAGLSPKHIAGTVVSLIGGGK 715
emb|CAA07554| (AJ007559) 1-deoxy-D-xylulose-5-phosphate synthase [Chlamydomonas
reinhardtii]
Length = 735
Score = 522 bits (1331), Expect = e-147
Identities = 285/637 (44%), Positives = 407/637 (63%), Gaps = 29/637 (4%)
Query: 4 KYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRV 63
K +L P +KN++ E L++L +E+R I++ S+ GGH+ SLGVVELT+A+ V
Sbjct: 78 KTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSSLGVVELTVAMHYV 137
Query: 64 FNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTS 123
FN PED I+WD+GHQ Y KILT R++ T+RQ G+SGF +R+ES YD FGAGHSSTS
Sbjct: 138 FNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDESEYDPFGAGHSSTS 197
Query: 124 ISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMS 183
ISAALG +G+D+KG+K VIAVIGDGA+T GMAYEA+N+AG + + IVILNDN+
Sbjct: 198 ISAALGMAVGRDVKGKKNS-VIAVIGDGAITGGMAYEAMNHAGFLDKN-MIVILNDNQQV 255
Query: 184 ISPN---------VGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLK 234
P VGA+S+ L R+ + ++E R+ K + + + +E+ +
Sbjct: 256 SLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQKATAKIDEYAR 315
Query: 235 GLISP--GVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKP 290
G+IS +FEELG YIGP+DGH++ L L+ V+ + GPVL+HV T+KG+GY P
Sbjct: 316 GMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEVRSAETVGPVLVHVVTEKGRGYLP 375
Query: 291 AEENPVKWHGVAPYKVESGEIIK-KSSPPTWTSVFGKALVELAERDEKIVAITPAMREGS 349
AE K HGV + +G+ ++ K+ ++T+ F AL AERD +IVA+ AM G+
Sbjct: 376 AETAQDKMHGVVKFDPRTGKQVQAKTKAMSYTNYFADALTAEAERDSRIVAVHAAMAGGT 435
Query: 350 GLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQ 409
GL F K+FPDR FDVGIAEQHA TFAAGLA EGL P YSTF+QR YDQ++HDV+LQ
Sbjct: 436 GLYRFEKKFPDRTFDVGIAEQHAVTFAAGLACEGLVPFCTIYSTFMQRGYDQIVHDVSLQ 495
Query: 410 NLPVTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GIYSGK 468
LPV FA+DRAGLVG DG TH G FD++++ +P+M+ AP +E EL +++ T
Sbjct: 496 KLPVRFAMDRAGLVGADGSTHCGAFDVTFMASLPHMITMAPSNEAELINMVATCAAIDDA 555
Query: 469 PFALRYPRG-------AAYGVPTE-GFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAA 520
P R+PRG AAYG+ + +E+G +G+D ++A G V +AL AA
Sbjct: 556 PSCFRFPRGNGLGLDLAAYGISKDLKGVPLEVGKGVVRRQGKDVCLVAYGSSVNEALAAA 615
Query: 521 EKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREG 580
+ L ++G+ V++ARF KP+D K++R A + IT+E+ + VGGF + V++F A EG
Sbjct: 616 DMLERDGVSTTVIDARFCKPLDTKLIRSAAKEHPVMITIEEGS-VGGFAAHVMQFLALEG 674
Query: 581 IMKRVIN---LGVPDRFIEHGKQDILRNLVGIDAEGI 614
++ + + +PDR+I+HG + G+ ++ I
Sbjct: 675 LLDGGLKFRPMTLPDRYIDHGDYRDQLAMAGLTSQHI 711
gb|AAF11042.1|AE001992_2 (AE001992) 1-deoxy-D-xylulose-5-phosphate synthase [Deinococcus
radiodurans]
Length = 629
Score = 519 bits (1322), Expect = e-146
Identities = 282/617 (45%), Positives = 387/617 (62%), Gaps = 11/617 (1%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
+L GP D+K E L L +E+R I+ V S+ G H+ SLG V++ AL V +
Sbjct: 12 LLDQIHGPKDLKRLSREQLPALTEELRGEIVRVCSRGGLHLASSLGAVDIITALHYVLDS 71
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P D I++D+GHQ Y KILT R++Q +++ GISGF + ES +DA GH+STS++
Sbjct: 72 PRDRILFDVGHQAYAHKILTGRRDQMADIKKEGGISGFTKVSESEHDAITVGHASTSLAN 131
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
ALG + +D +G K+ +V AVIGDG+LT GMA ALN G + + +++LNDNEMSIS
Sbjct: 132 ALGMALARDAQG-KDFHVAAVIGDGSLTGGMALAALNTIGDMGR-KMLIVLNDNEMSISE 189
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVI--FE 244
NVGA++ ++ + + QE K ++ + M + + P + F
Sbjct: 190 NVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRHFFDPASVNPFA 249
Query: 245 ELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGVAPY 304
+G Y+GP+DGH+++ L L + D+ GP +LH+ T KGKG AE +P+ WHG A +
Sbjct: 250 AMGVRYVGPVDGHNVQELVWLLERLVDLDGPTILHIVTTKGKGLSYAEADPIYWHGPAKF 309
Query: 305 KVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFD 364
+GE + SS +W++ FG+A+ E A+ D + +TPAMREGSGLVEF++ P R+ D
Sbjct: 310 DPATGEYVP-SSAYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGSGLVEFSRVHPHRYLD 368
Query: 365 VGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVG 424
VGIAE+ A T AAG+A +G+RPV A YSTFLQRAYDQV+HDVA+++L VTF IDRAG+VG
Sbjct: 369 VGIAEEVAVTTAAGMALQGMRPVVAIYSTFLQRAYDQVLHDVAIEHLNVTFCIDRAGIVG 428
Query: 425 DDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLL-YTGIYSGKPFALRYPRGAAYGVP 483
DG TH+GVFDLS+LR +P + + PKD ELR +L Y + G PFA+RYPRG VP
Sbjct: 429 ADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQTHDG-PFAIRYPRGNTAQVP 487
Query: 484 TEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDE 543
+ ++ G WE L G+D VILA G + AL+AAE L VGVVNARFVKP+DE
Sbjct: 488 AGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDL----PGVGVVNARFVKPLDE 543
Query: 544 KMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDIL 603
+MLR++ R ITVEDNTVVGGFG VLE + V LG+PD F EH + +
Sbjct: 544 EMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMNLHPTVRVLGIPDEFQEHATAESV 603
Query: 604 RNLVGIDAEGIEKAVRD 620
GIDA I + +
Sbjct: 604 HARAGIDAPAIRTVLAE 620
gb|AAD36833.1|AE001815_7 (AE001815) 1-deoxyxylulose-5-phosphate synthase [Thermotoga
maritima]
Length = 608
Score = 517 bits (1317), Expect = e-145
Identities = 279/614 (45%), Positives = 387/614 (62%), Gaps = 24/614 (3%)
Query: 16 DIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVWDI 75
+IK Y+ L++LA+++R I V KNGGH+ +LG +ELT+AL RVF+P ED I+WD
Sbjct: 5 EIKRMSYDELKRLAEDIRKRITEVVLKNGGHLASNLGTIELTLALYRVFDPREDAIIWDT 64
Query: 76 GHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIGKD 135
GHQ Y KILT R + F T+R + G+SGF+ R ES D FG GH+ TSI+A LGF +
Sbjct: 65 GHQAYTHKILTGRDDLFHTIRTFGGLSGFVTRRESPLDWFGTGHAGTSIAAGLGFEKAFE 124
Query: 136 LKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAISTYL 195
L GEK +V+ VIGDGALT+GMA EALN ++ + +ILNDN MSISPNVG ++ +L
Sbjct: 125 LLGEKR-HVVVVIGDGALTSGMALEALNQLKNLN-SKMKIILNDNGMSISPNVGGLAYHL 182
Query: 196 NRIISGHFVQETRQKIKNFLQ--HFGETPLRIMKLTEEFLKGLISPGVIFEELGFNYIGP 253
+++ + + ++ +K L+ G MK + LKG+I FE LG Y GP
Sbjct: 183 SKLRTSPIYLKGKKVLKKVLEKTEIGFEVEEEMKYLRDSLKGMIQGTNFFESLGLKYFGP 242
Query: 254 IDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGVAPYKVESGEIIK 313
DGH+I+ LE ++D ++HV TKKGKG+ AEENP K+H +P SG
Sbjct: 243 FDGHNIELLEKVFKRIRDYDYSSVVHVVTKKGKGFTAAEENPTKYHSASP----SG---- 294
Query: 314 KSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHAC 373
K +++ + G L +A D+KIVAIT AM +G+GL F K PDRFFD+GI EQ
Sbjct: 295 KPKMLSYSELLGHTLSRVAREDKKIVAITAAMADGTGLSIFQKEHPDRFFDLGITEQTCV 354
Query: 374 TFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHGV 433
TF A L G++PV A YSTFLQRAYDQ+IHDVALQN PV FAIDR+G+VG+DGPTHHG+
Sbjct: 355 TFGAALGLHGMKPVVAIYSTFLQRAYDQIIHDVALQNAPVLFAIDRSGVVGEDGPTHHGL 414
Query: 434 FDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGAAYGVP---TEGFKK 489
FD++YL VPNM + +P +E + LYT + + P A+RYP+ + YG E K+
Sbjct: 415 FDINYLLPVPNMKIISPSSPEEFVNSLYTVLKHLDGPVAIRYPKESFYGEVESLLENMKE 474
Query: 490 IEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDL 549
I++G W+ L G + I+A G + + L K + V VVNA VKP+D +L+++
Sbjct: 475 IDLG-WKILKRGREAAIIATGTILNEVL-------KIPLDVTVVNALTVKPLDTAVLKEI 526
Query: 550 ANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDILRNLVGI 609
A +D ITVE+ +GGFGS V + G +++NLGV D F+ HG + L +++G+
Sbjct: 527 ARDHDLIITVEEAMKIGGFGSFVAQRLQEMGWQGKIVNLGVEDLFVPHGGRKELLSMLGL 586
Query: 610 DAEGIEKAVRDALK 623
D+EG+ K V +K
Sbjct: 587 DSEGLTKTVLTYIK 600
gi|3323137 (AE001253) transketolase B (tktB) [Treponema pallidum]
Length = 630
Score = 498 bits (1269), Expect = e-140
Identities = 283/614 (46%), Positives = 367/614 (59%), Gaps = 10/614 (1%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
+L+ GP D+K+ E ++ LAQEVR I+ V S NGGH+ +LGVVELTIAL RVF+
Sbjct: 5 LLRSLTGPHDLKSLSPEQVRALAQEVRQEILRVVSANGGHLASNLGVVELTIALHRVFSC 64
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P DV+VWD+GHQ Y K+LT R +F TLRQ GISGF RR+ES YDAFG GHSST++SA
Sbjct: 65 PHDVVVWDVGHQCYAHKLLTGRAGRFHTLRQKDGISGFPRRDESPYDAFGTGHSSTALSA 124
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
A G +G K V+AV+GDGALTAG+A+EAL N G D IVILNDN+MSISP
Sbjct: 125 ASGILSALRYRG-KSGKVVAVVGDGALTAGLAFEALLNVGRSCSD-LIVILNDNKMSISP 182
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQHF---GETPLRIMKLTEEFLKGLISPGVIF 243
N G+ S YL+ + Q+ + +++ LQ G R + + + L+ IF
Sbjct: 183 NTGSFSRYLSTLTVKGPYQKLKTRLRRALQTVPLVGRPACRALSRLKRSARTLLYQSNIF 242
Query: 244 EELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGVAP 303
+ GF Y+GP++GH I+ LE LN+ K + P LLHV T KGKGY AE+NP +HGV P
Sbjct: 243 ADFGFEYVGPLNGHHIEDLERVLNDAKKLTRPTLLHVQTVKGKGYPFAEQNPTDFHGVGP 302
Query: 304 YKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFF 363
+ + G I++K T+T F L+ A D+++VAIT AM G+GL F+ +P+RFF
Sbjct: 303 FNLAEG-IVEKKDALTFTEAFSHTLLNAARTDDRVVAITAAMTGGTGLGLFSHIYPERFF 361
Query: 364 DVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLV 423
DVGIAEQHA TFAAGLA G++PV A YSTFLQRA DQVIHDVA+QNLPV FA+DRAG V
Sbjct: 362 DVGIAEQHAVTFAAGLACAGVKPVVAVYSTFLQRAVDQVIHDVAVQNLPVIFALDRAGAV 421
Query: 424 GDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAYGVP 483
DG TH G+FDLS LR VPN+ + P EL L + P A+RYP+ A
Sbjct: 422 PHDGETHQGLFDLSILRAVPNINILCPASAHELSLLFGWALAQDTPVAIRYPK-ALCPPE 480
Query: 484 TEGFK-KIEIGTWEELLEGEDCVILAV--GYPVYQALRAAEKLYKEGIRVGVVNARFVKP 540
+GF + G + +C +L V G + AA L ++GI + N RFVKP
Sbjct: 481 EDGFSTPVHTGRGVLITRENECNVLLVCTGGVFPEVTAAANTLARKGIFADIYNVRFVKP 540
Query: 541 MDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQ 600
+DE DL RY + + VED +GG + L D F HG +
Sbjct: 541 VDEDYFLDLVGRYRSVLFVEDGVKIGGIAEALQALLNTRHPAPCSDVLAFQDMFYPHGSR 600
Query: 601 DILRNLVGIDAEGI 614
+ G+ A I
Sbjct: 601 AQVLAAAGLSAPHI 614
gi|4154849 (AE001468) 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE [Helicobacter
pylori J99]
Length = 618
Score = 474 bits (1207), Expect = e-133
Identities = 258/609 (42%), Positives = 373/609 (60%), Gaps = 11/609 (1%)
Query: 15 FDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVWD 74
FD+ D L+ + Q +R+ I+ V S NGGH+ SLG VEL + + +F+ ++ ++D
Sbjct: 8 FDLNPNDIAGLELVCQTLRNRILEVVSANGGHLSSSLGAVELIVGMHALFDCQKNPFIFD 67
Query: 75 IGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIGK 134
HQ Y K+LT R E F TLRQ++G+SGF + ES YD F AGHSSTS+S +G
Sbjct: 68 TSHQAYAHKLLTGRFESFSTLRQFQGLSGFTKPSESAYDYFIAGHSSTSVSIGVGVAKAF 127
Query: 135 DLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAISTY 194
LK + IA++GDG+++AG+ YEALN G R I+ILNDNEMSIS +GA+S
Sbjct: 128 RLK-QTLGMPIALLGDGSISAGIFYEALNELGD-RKYPMIMILNDNEMSISTPIGALSKA 185
Query: 195 LNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEELGFNYIGPI 254
L++++ G F Q R K+K L E+ + EE K LI+PGV FEELG NYIGPI
Sbjct: 186 LSQLMKGPFYQSFRSKVKKILSTLPESVNYLASRFEESFK-LITPGVFFEELGINYIGPI 244
Query: 255 DGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGVAPYKVESGEIIKK 314
+GHD+ + +TL K++K PVL+H T KGKGYK AE KWHGV P+ +++G + KK
Sbjct: 245 NGHDLGTIIETLKLAKELKEPVLIHAQTLKGKGYKIAEGRYEKWHGVGPFDLDTG-LSKK 303
Query: 315 SSPPTW--TSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHA 372
S T T + L+ELA++DEKIV +T AM G+GL + +P RFFDV IAEQHA
Sbjct: 304 SKSATLSPTEAYSNTLLELAKKDEKIVGVTAAMPSGTGLDKLIDAYPLRFFDVAIAEQHA 363
Query: 373 CTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHG 432
T ++ +A EG +P + YSTFLQRAYD ++HD + +LP+ AIDRAG+VG+DG TH G
Sbjct: 364 LTSSSAMAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQG 423
Query: 433 VFDLSYLRCVPNMVVCAPKDEQELRDLLY-TGIYSGKPFALRYPRGAAYGVPTEGFKK-- 489
+ D+SYLR +PNMV+ AP+D + L++ +Y + P A RYPRG ++ + F+
Sbjct: 424 LLDVSYLRSIPNMVIFAPRDNETLKNAVYFANEHDSSPCAFRYPRG-SFALKEGVFEPSG 482
Query: 490 IEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDL 549
+G E L + + +++ G V +A L ++ I +++ RF+KP+D + +
Sbjct: 483 FVLGRSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDHNLSAII 542
Query: 550 ANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDILRNLVGI 609
A Y DN +GG S +LEF + + I+K V + + D FI HG ++ +G+
Sbjct: 543 A-PYQKLYVFSDNYKLGGVASAILEFLSEQNILKPVKSFEITDEFIMHGNTALVEKSLGL 601
Query: 610 DAEGIEKAV 618
D E + A+
Sbjct: 602 DTESLTDAI 610
gb|AAD07422.1| (AE000552) deoxyxylulose-5-phosphate synthase, putative (dxs)
[Helicobacter pylori 26695]
Length = 618
Score = 473 bits (1204), Expect = e-132
Identities = 258/608 (42%), Positives = 373/608 (60%), Gaps = 9/608 (1%)
Query: 15 FDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVWD 74
FD+ D L+ + Q +R+ I+ V S NGGH+ SLG VEL + + +F+ ++ ++D
Sbjct: 8 FDLNPNDIAGLELVCQTLRNRILEVVSANGGHLSSSLGAVELIVGMHALFDCQKNPFIFD 67
Query: 75 IGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIGK 134
HQ Y K+LT R E F TLRQ+KG+SGF + ES YD F AGHSSTS+S +G
Sbjct: 68 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSESAYDYFIAGHSSTSVSIGVGVAKAF 127
Query: 135 DLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAISTY 194
LK + IA++GDG+++AG+ YEALN G R I+ILNDNEMSIS +GA+S
Sbjct: 128 CLK-QALGMPIALLGDGSISAGIFYEALNELGD-RKYPMIMILNDNEMSISTPIGALSKA 185
Query: 195 LNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEELGFNYIGPI 254
L++++ G F Q R K+K L E+ + EE K LI+PGV FEELG NYIGPI
Sbjct: 186 LSQLMKGPFYQSFRSKVKKILSTLPESVNYLASRFEESFK-LITPGVFFEELGINYIGPI 244
Query: 255 DGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGVAPYKVESGEIIK- 313
+GHD+ A+ +TL K++K PVL+H T KGKGYK AE KWHGV P+ +++G K
Sbjct: 245 NGHDLSAIIETLKLAKELKEPVLIHAQTLKGKGYKIAEGRYEKWHGVGPFDLDTGLSKKS 304
Query: 314 KSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHAC 373
KS+ + T + L+ELA++DEKIV +T AM G+GL + +P RFFDV IAEQHA
Sbjct: 305 KSAILSPTEAYSNTLLELAKKDEKIVGVTAAMPSGTGLDKLIDAYPLRFFDVAIAEQHAL 364
Query: 374 TFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHGV 433
T ++ +A EG +P + YSTFLQRAYD ++HD + +LP+ AIDRAG+VG+DG TH G+
Sbjct: 365 TSSSAMAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGL 424
Query: 434 FDLSYLRCVPNMVVCAPKDEQELRDLL-YTGIYSGKPFALRYPRGAAYGVPTEGFKK--I 490
D+SYLR +PNMV+ AP+D + L++ + + + P A RYPRG ++ + F+
Sbjct: 425 LDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRG-SFALKEGVFEPSGF 483
Query: 491 EIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLA 550
+G E L + + +++ G V +A L ++ I +++ RF+KP+D L +
Sbjct: 484 VLGQSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPN-LSAIV 542
Query: 551 NRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDILRNLVGID 610
Y DN +GG S +LEF + + I+K V + + D FI HG ++ +G+D
Sbjct: 543 APYQKLYVFSDNYKLGGVASAILEFLSEQNILKPVKSFEIIDEFIMHGNTALVEKSLGLD 602
Query: 611 AEGIEKAV 618
E + A+
Sbjct: 603 TESLTDAI 610
gb|AAD19197| (AE001686) Transketolase [Chlamydia pneumoniae]
Length = 644
Score = 453 bits (1154), Expect = e-126
Identities = 246/615 (40%), Positives = 362/615 (58%), Gaps = 13/615 (2%)
Query: 14 PFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIVW 73
P D+K L LA+E+R II+V S+ GGH+ +LG+VELTIAL VF+ P+D ++
Sbjct: 15 PADLKKLSISQLPGLAEEIRYRIISVLSQTGGHLSSNLGIVELTIALHYVFSSPKDKFIF 74
Query: 74 DIGHQGYPWKILTDRK-EQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRI 132
D+GHQ YP K+LT R E F +R G+SGF ES +D F +GH+ T++S ALG
Sbjct: 75 DVGHQTYPHKLLTGRNNEGFDHIRNDNGLSGFTNPTESDHDLFFSGHAGTALSLALGMAQ 134
Query: 133 GKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAIS 192
L E +VI ++GD A + G+ EALNN +F+VILNDN MSIS NVGA+S
Sbjct: 135 TTPL--ESRTHVIPILGDAAFSCGLTLEALNNIS-TDLSKFVVILNDNNMSISKNVGAMS 191
Query: 193 TYLNRIISGHFVQETRQKIKNFLQ---HFGETPLRIMKLTEEFLKGLISPGVIFEELGFN 249
+R + + ++++ +L +G++ + + + +K L P +FE+ G
Sbjct: 192 RIFSRWLHHPATNKLTKQVEKWLAKIPRYGDSLAKHSRRLSQCVKNLFCPTPLFEQFGLA 251
Query: 250 YIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKWHGVAPY--KVE 307
Y+GPIDGH++K L L +V+++ P+L+HV T KGKG A+ NP K+HGV K E
Sbjct: 252 YVGPIDGHNVKKLIPILQSVRNLPFPILVHVCTTKGKGLDQAQNNPAKYHGVRANFNKRE 311
Query: 308 SGEIIKKSSP-PTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVG 366
S + + P P++ +FG+ L EL E ++ +TPAM GS L F ++FP+RFFDVG
Sbjct: 312 SAKHLPAIKPKPSFPDIFGQTLCELGEVSSRLHVVTPAMSIGSRLEGFKQKFPERFFDVG 371
Query: 367 IAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDD 426
IAE HA TF+AG+A G + + YSTFL RA D V HDV +Q+LPV FAIDRAGL D
Sbjct: 372 IAEGHAVTFSAGIAKAGNPVICSIYSTFLHRALDNVFHDVCMQDLPVIFAIDRAGLAYGD 431
Query: 427 GPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPR-GAAYGVPTE 485
G +HHG++D+S+LR +P M++C P+ + + LLY+ ++ P A+RYP A +G P
Sbjct: 432 GRSHHGIYDMSFLRAMPQMIICQPRSQVVFQQLLYSSLHWSSPSAIRYPNIPAPHGDPLT 491
Query: 486 GFKKI--EIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDE 543
G G E L +GED +I+A+G + AL +L GI VV+ F+KP D
Sbjct: 492 GDPNFLRSPGNAETLSQGEDVLIIALGTLCFTALSIKHQLLAYGISATVVDPIFIKPFDN 551
Query: 544 KMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDIL 603
+ L + IT+E++++ GG S F A ++N +PD F+ HG ++ L
Sbjct: 552 DLFSLLLMSHSKVITIEEHSIRGGLASEFNNFVATFNFKVDILNFAIPDTFLSHGSKEAL 611
Query: 604 RNLVGIDAEGIEKAV 618
+G+D + +
Sbjct: 612 TKSIGLDESSMTNRI 626
sp|O07184|DXS_MYCTU PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE)
>gi|2181973|emb|CAB09493| (Z96072) dxs [Mycobacterium
tuberculosis]
Length = 638
Score = 435 bits (1107), Expect = e-121
Identities = 254/641 (39%), Positives = 375/641 (57%), Gaps = 33/641 (5%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
+L+ +GP D+++ L++LA E+R+++I+ + GGH+GP+LGVVELT+AL RVF+
Sbjct: 1 MLQQIRGPADLQHLSQAQLRELAAEIREFLIHKVAATGGHLGPNLGVVELTLALHRVFDS 60
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P D I++D GHQ Y K+LT R + F TLR+ G+SG+ R ES +D + H+S ++S
Sbjct: 61 PHDPIIFDTGHQAYVHKMLTGRSQDFATLRKKGGLSGYPSRAESEHDWVESSHASAALSY 120
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNN-AGHIRPDRFIVILNDNEMSIS 185
A G +L G + +V+AV+GDGALT GM +EALNN A RP I+++NDN S +
Sbjct: 121 ADGLAKAFELTGHRNRHVVAVVGDGALTGGMCWEALNNIAASRRP--VIIVVNDNGRSYA 178
Query: 186 PNVGAISTYLNRI-ISGHFVQ--ETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVI 242
P +G ++ +L + + + Q ET + + + G R + + +K +SP ++
Sbjct: 179 PTIGGVADHLATLRLQPAYEQALETGRDLVRAVPLVGGLWFRFLHSVKAGIKDSLSPQLL 238
Query: 243 FEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVK-WHGV 301
F +LG Y+GP+DGHD +A+E L + + PV++HV T+KG GY PAE + + H
Sbjct: 239 FTDLGLKYVGPVDGHDERAVEVALRSARRFGAPVIVHVVTRKGMGYPPAEADQAEQMHST 298
Query: 302 APYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDR 361
P +G+ K + P WT+ F AL+ A++ IVAIT AM +GL F +RFPDR
Sbjct: 299 VPIDPATGQATKVAGPG-WTATFSDALIGYAQKRRDIVAITAAMPGPTGLTAFGQRFPDR 357
Query: 362 FFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAG 421
FDVGIAEQHA T AAGLA GL PV A YSTFL RA+DQ++ DVAL LPVT +DRAG
Sbjct: 358 LFDVGIAEQHAMTSAAGLAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAG 417
Query: 422 LVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGAAY 480
+ G DG +H+G++DLS L VP + V AP+D LR+ L + P ALR+P+G
Sbjct: 418 ITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGDV- 476
Query: 481 GVPTEGFKKIEIGTWEELLE------GEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVN 534
E +E ++L D +++A+G AL A++L+ +GI V V++
Sbjct: 477 ---GEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVID 533
Query: 535 ARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRF 594
R+V P+ + +R+LA ++ +T+EDN V GG GS V R I ++G+P F
Sbjct: 534 PRWVLPVSDG-VRELAVQHKLLVTLEDNGVNGGAGSAVSAALRRAEIDVPCRDVGLPQEF 592
Query: 595 IEHGK------------QDILRNLVG-IDAEGIEKAVRDAL 622
EH QD+ R + G + A G DA+
Sbjct: 593 YEHASRSEVLADLGLTDQDVARRITGWVAALGTGVCASDAI 633
gb|AAC67926.1| (AE001306) Transketolase [Chlamydia trachomatis]
Length = 640
Score = 432 bits (1100), Expect = e-120
Identities = 245/634 (38%), Positives = 361/634 (56%), Gaps = 24/634 (3%)
Query: 5 YEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVF 64
Y +L P D+ + L L E+R+ II S GGH+ +LG VELT+AL VF
Sbjct: 3 YSLLPHIHSPQDLHALSLDKLPVLCDEIRNKIIESLSLTGGHLASNLGGVELTVALHYVF 62
Query: 65 NPPEDVIVWDIGHQGYPWKILTDRK-EQFPTLRQYKGISGFLRREESIYDAFGAGHSSTS 123
+ P+D ++D+GHQ Y K+LT R E F +R G+SGF +ES +D F +GH+ +
Sbjct: 63 SSPDDQFIFDVGHQSYVHKLLTGRNTEAFSNIRHDNGLSGFTTPQESNHDIFFSGHAGNA 122
Query: 124 ISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPD--RFIVILNDNE 181
+S ALG G +++ ++GD A + G+ EALNN I D +FI++LNDN+
Sbjct: 123 LSLALGLAKGSS---NSSSHILPILGDAAFSCGLTLEALNN---IPADLSKFIIVLNDNQ 176
Query: 182 MSISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEF---LKGLIS 238
MSIS NVG I ++ + + + QKI +++Q+ + L+ + LK L
Sbjct: 177 MSISENVGNIPQGISHWMYPQKISKLSQKIHSWIQNLPSFLHKKKTLSHKVDIALKSLSH 236
Query: 239 PGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVKW 298
P +FE+ G +Y+GPIDGH++K L L +KD P+L HV T KG G AE +P+++
Sbjct: 237 P--LFEQFGLHYVGPIDGHNVKKLVQALQMIKDQPQPILFHVCTVKGNGLAEAERDPIRY 294
Query: 299 HGVAPY------KVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLV 352
HGV + K SG + + +P ++ G L L ++ ++ +TPAM GS L
Sbjct: 295 HGVKAHFQNTSLKKTSGNV-ELQTPISFPQHAGNILCRLGKKYPQLQVVTPAMSLGSCLE 353
Query: 353 EFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLP 412
+F K+FPDRF DVGIAE HA TF+AG+A G + YSTFL RA D V HDV +Q LP
Sbjct: 354 DFRKQFPDRFTDVGIAEGHAVTFSAGIARSGTPVCCSIYSTFLHRAMDNVFHDVCMQELP 413
Query: 413 VTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFAL 472
V FAIDRAGL DG +HHG++DL +L +PNMV+C P++ L L ++ + P A+
Sbjct: 414 VIFAIDRAGLAFHDGRSHHGIYDLGFLCSMPNMVICQPRNALVLERLFFSSLLWKSPCAI 473
Query: 473 RYPRGAAYGVPTEG---FKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIR 529
RYP A + F I G E L +G+D +++A+G+ AL E L GI
Sbjct: 474 RYPNIPANEKASNSFFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGIS 533
Query: 530 VGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLG 589
VV+ F+KP+D K+L+ L + I +E++++ GG GS L F + I V++LG
Sbjct: 534 TTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGSEFLLFLNQHNIKADVLSLG 593
Query: 590 VPDRFIEHGKQDILRNLVGIDAEGIEKAVRDALK 623
VPD FI HG + + NL+G+ ++ I + + K
Sbjct: 594 VPDMFIPHGNPETILNLIGLTSDHITQRILSHFK 627
emb|CAB39701.1| (AL049485) probable transketolase [Streptomyces coelicolor]
Length = 656
Score = 432 bits (1099), Expect = e-120
Identities = 245/599 (40%), Positives = 351/599 (57%), Gaps = 9/599 (1%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
IL++ +GP D+K L +L+ E+RD++++ ++ GGH+GP+LGVVELT+AL RVF
Sbjct: 3 ILENIRGPRDLKALSEAELGELSDEIRDFLVHAVARTGGHLGPNLGVVELTVALHRVFES 62
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P+D I+WD GHQ Y K+LT R++ F LR G+SG+ REES +D H+ST +
Sbjct: 63 PDDRILWDTGHQSYVHKLLTGRQD-FSKLRSKGGLSGYPSREESAHDVIENSHASTVLGW 121
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
A G + ++GE+ +V+AVIGDGALT GMA+EALNN R I+++NDNE S +P
Sbjct: 122 ADGLAKARQVQGERS-HVVAVIGDGALTGGMAWEALNNIAAARDRPLIIVVNDNERSYAP 180
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQH---FGETPLRIMKLTEEFLKGLISPGVIF 243
+G ++ +L + + + K+ LQ G T + ++ K +P +F
Sbjct: 181 TIGGLANHLATLRTTDGYERALAWGKDVLQRTPVVGHTVYEALHGAKKGFKDAFAPQGLF 240
Query: 244 EELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPA-EENPVKWHGVA 302
E+LG Y+GPIDGHDI A+E L K GPVL+H T+KG+GY+PA + +H V
Sbjct: 241 EDLGLKYLGPIDGHDIGAVESALRRAKRFHGPVLVHCLTEKGRGYEPALRDEEDHFHTVG 300
Query: 303 PYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRF 362
+ E + + P+WTSVFG+ +V + E +VAIT AM GL FA+RFPDR
Sbjct: 301 VMDPLTCEPLGPAGGPSWTSVFGEEIVRIGEERADVVAITAAMLHPVGLAPFAERFPDRV 360
Query: 363 FDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGL 422
+DVGIAEQHA AAGLA GL PV A Y+TFL RA+DQ++ DVAL VTF +DRAG+
Sbjct: 361 WDVGIAEQHAAVSAAGLATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRAGV 420
Query: 423 VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGAAYG 481
G DG +H+G++D+S L+ VP + + AP+D +LR L + P LR+P+ + G
Sbjct: 421 TGVDGASHNGMWDMSVLQVVPGLRIAAPRDADQLRTQLREAVAVDDAPTLLRFPK-ESVG 479
Query: 482 VPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPM 541
+I + + +++AVG L AAE L GI VV+ R+VKP+
Sbjct: 480 PAVPAVDRIGGLDVLHTADRSEVLLVAVGVMAPVCLGAAELLEARGIGCTVVDPRWVKPV 539
Query: 542 DEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQ 600
D L LA R+ VEDN+ G GS V + V G+P++F+ H K+
Sbjct: 540 D-PALAPLAARHRLVAVVEDNSRAAGVGSAVALALGDAEVDVPVRRFGIPEQFLAHAKR 597
sp|Q50000|DXS_MYCLE PROBABLE 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (DXP SYNTHASE)
Length = 643
Score = 421 bits (1071), Expect = e-117
Identities = 236/619 (38%), Positives = 366/619 (59%), Gaps = 10/619 (1%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
+L+ + P D+++ + L+ LA E+R+ +++ + GGH+GP+LGVVELT+AL RVF+
Sbjct: 1 MLEQIRRPADLQHLSQQQLRDLAAEIRELLVHKVAATGGHLGPNLGVVELTLALHRVFDS 60
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P D I++D GHQ Y K+LT R + F +LR+ G+SG+ R ES +D + H+ST++S
Sbjct: 61 PHDPIIFDTGHQAYVHKMLTGRCQDFDSLRKKAGLSGYPSRAESEHDWVESSHASTALSY 120
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
A G +L G + +V+AV+GDGALT GM +EALNN P ++++NDN S +P
Sbjct: 121 ADGLAKAFELAGNRNRHVVAVVGDGALTGGMCWEALNNIA-ATPRPVVIVVNDNGRSYAP 179
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQHF---GETPLRIMKLTEEFLKGLISPGVIF 243
+G ++ +L + + +K ++ L G+ R M + +K +SP ++F
Sbjct: 180 TIGGVADHLATLRLQPAYERLLEKGRDALHSLPLIGQIAYRFMHSVKAGIKDSLSPQLLF 239
Query: 244 EELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVK-WHGVA 302
+LG Y+GP+DGHD A+E L + GPV++HV T+KG GY PAE + + H
Sbjct: 240 TDLGLKYVGPVDGHDEHAVEVALRKARGFGGPVIVHVVTRKGMGYPPAEADQAEQMHTCG 299
Query: 303 PYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRF 362
+G+ K ++P WT++F AL+ A + IVAIT AM +GL F + FPDR
Sbjct: 300 VMDPTTGQPTKIAAPD-WTAIFSDALIGYAMKRRDIVAITAAMPGPTGLTAFGQCFPDRL 358
Query: 363 FDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGL 422
FDVGIAEQHA T AAGLA + PV A YSTFL RA+DQ++ DVAL LPVT IDRAG+
Sbjct: 359 FDVGIAEQHAMTSAAGLAMGRMHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVIDRAGI 418
Query: 423 VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRG-AAY 480
G DGP+H+G++DLS L VP M V AP+D LR+ L + P A+R+P+G
Sbjct: 419 TGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGDVCE 478
Query: 481 GVPT-EGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVK 539
+P + +++ +D +++ VG AL A++L+ +GI V V++ R+V
Sbjct: 479 DIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVL 538
Query: 540 PMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGK 599
P+ + +L +LA+ + +T+EDN V GG G+ V + I ++G+P F +H
Sbjct: 539 PVCDGVL-ELAHTHKLIVTLEDNGVNGGVGAAVSTALRQVEIDTPCRDVGLPQEFYDHAS 597
Query: 600 QDILRNLVGIDAEGIEKAV 618
+ + +G+ + + + +
Sbjct: 598 RSEVLADLGLTDQDVARRI 616
gi|699189 (U15181) transketolase [Mycobacterium leprae]
Length = 736
Score = 421 bits (1071), Expect = e-117
Identities = 236/619 (38%), Positives = 366/619 (59%), Gaps = 10/619 (1%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
+L+ + P D+++ + L+ LA E+R+ +++ + GGH+GP+LGVVELT+AL RVF+
Sbjct: 94 MLEQIRRPADLQHLSQQQLRDLAAEIRELLVHKVAATGGHLGPNLGVVELTLALHRVFDS 153
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P D I++D GHQ Y K+LT R + F +LR+ G+SG+ R ES +D + H+ST++S
Sbjct: 154 PHDPIIFDTGHQAYVHKMLTGRCQDFDSLRKKAGLSGYPSRAESEHDWVESSHASTALSY 213
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
A G +L G + +V+AV+GDGALT GM +EALNN P ++++NDN S +P
Sbjct: 214 ADGLAKAFELAGNRNRHVVAVVGDGALTGGMCWEALNNIA-ATPRPVVIVVNDNGRSYAP 272
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQHF---GETPLRIMKLTEEFLKGLISPGVIF 243
+G ++ +L + + +K ++ L G+ R M + +K +SP ++F
Sbjct: 273 TIGGVADHLATLRLQPAYERLLEKGRDALHSLPLIGQIAYRFMHSVKAGIKDSLSPQLLF 332
Query: 244 EELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENPVK-WHGVA 302
+LG Y+GP+DGHD A+E L + GPV++HV T+KG GY PAE + + H
Sbjct: 333 TDLGLKYVGPVDGHDEHAVEVALRKARGFGGPVIVHVVTRKGMGYPPAEADQAEQMHTCG 392
Query: 303 PYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRF 362
+G+ K ++P WT++F AL+ A + IVAIT AM +GL F + FPDR
Sbjct: 393 VMDPTTGQPTKIAAPD-WTAIFSDALIGYAMKRRDIVAITAAMPGPTGLTAFGQCFPDRL 451
Query: 363 FDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGL 422
FDVGIAEQHA T AAGLA + PV A YSTFL RA+DQ++ DVAL LPVT IDRAG+
Sbjct: 452 FDVGIAEQHAMTSAAGLAMGRMHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVIDRAGI 511
Query: 423 VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRG-AAY 480
G DGP+H+G++DLS L VP M V AP+D LR+ L + P A+R+P+G
Sbjct: 512 TGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGDVCE 571
Query: 481 GVPT-EGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVK 539
+P + +++ +D +++ VG AL A++L+ +GI V V++ R+V
Sbjct: 572 DIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVL 631
Query: 540 PMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGK 599
P+ + +L +LA+ + +T+EDN V GG G+ V + I ++G+P F +H
Sbjct: 632 PVCDGVL-ELAHTHKLIVTLEDNGVNGGVGAAVSTALRQVEIDTPCRDVGLPQEFYDHAS 690
Query: 600 QDILRNLVGIDAEGIEKAV 618
+ + +G+ + + + +
Sbjct: 691 RSEVLADLGLTDQDVARRI 709
dbj|BAA85847.1| (AB026631) 1-deoxy-D-xylulose 5-phosphate synthase [Streptomyces
sp. CL190]
Length = 631
Score = 409 bits (1041), Expect = e-113
Identities = 241/603 (39%), Positives = 349/603 (56%), Gaps = 17/603 (2%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
IL++ + P D+K E L +L++E+R ++++ ++ GGH+GP+LGVVELTIAL RVF
Sbjct: 3 ILENIRQPRDLKALPEEQLHELSEEIRQFLVHAVTRTGGHLGPNLGVVELTIALHRVFES 62
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P D I+WD GHQ Y K+LT R++ F LR G+SG+ REES +D H+ST++
Sbjct: 63 PVDRILWDTGHQSYVHKLLTGRQD-FSKLRGKGGLSGYPSREESEHDVIENSHASTALGW 121
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
A G + ++GEK +V+AVIG ALT GMA+EALNN + I+++NDNE S +P
Sbjct: 122 ADGLAKARRVQGEK-GHVVAVIGGRALTGGMAWEALNNIAAAKDQPLIIVVNDNERSYAP 180
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQH---FGETPLRIMKLTEEFLKGLISPGVIF 243
+G ++ +L + + ++ K+ L G + ++ K +P +F
Sbjct: 181 TIGGLANHLATLRTTDGYEKVLAWGKDVLLRTPIVGHPLYEALHGAKKGFKDAFAPQGMF 240
Query: 244 EELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPA---EENPVKWHG 300
E+LG Y+GPIDGHDI A+E L K GPVL+H T KG+GY+PA EE+ +H
Sbjct: 241 EDLGLKYVGPIDGHDIGAVESALRRAKRFHGPVLVHCLTVKGRGYEPALAHEED--HFHT 298
Query: 301 VAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPD 360
V + E + + P+WTSVFG +V + E IVAIT AM GL FA RFPD
Sbjct: 299 VGVMDPLTCEPLSPTDGPSWTSVFGDEIVRIGAEREDIVAITAAMLHPVGLARFADRFPD 358
Query: 361 RFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRA 420
R +DVGIAEQHA AAGLA GL PV A Y+TFL RA+DQ++ DVAL VTF +DRA
Sbjct: 359 RVWDVGIAEQHAAVSAAGLATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRA 418
Query: 421 GLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGI-YSGKPFALRYPRGAA 479
G+ G DG +H+G++D+S L+ VP + + AP+D +R L + P +R+P+ +
Sbjct: 419 GVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADHVRAQLREAVAVDDAPTLIRFPK-ES 477
Query: 480 YGVPTEGFKKIEIGTWEELLEGE--DCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARF 537
G + +G + L E + +++AVG L+ AE L GI VV+ R+
Sbjct: 478 VGPRIPALDR--VGGLDVLHRDERPEVLLVAVGVMAQVCLQTAELLRARGIGCTVVDPRW 535
Query: 538 VKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEH 597
VKP+D +L LA + VEDN+ G GS V + V G+P++F+ H
Sbjct: 536 VKPVD-PVLPPLAAEHRLVAVVEDNSRAAGVGSAVALALGDADVDVPVRRFGIPEQFLAH 594
Query: 598 GKQ 600
++
Sbjct: 595 ARR 597
dbj|BAA83576.1| (AP000399) ESTs AU078063(S15496),C97608(C60475), C28255(C60475)
correspond to a region of the predicted gene; similar to
plastid transketolase 2 (Y15782) [Oryza sativa]
Length = 628
Score = 400 bits (1018), Expect = e-110
Identities = 242/608 (39%), Positives = 343/608 (55%), Gaps = 34/608 (5%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
IL P +KN + L++LA EVR I + S+ VVEL IA+ VFN
Sbjct: 31 ILDTIDAPIHLKNLSSKELKQLAGEVRSEISFIMSRKCQPCNTGHSVVELAIAIHYVFNA 90
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P D I+WD G Y KILT R+ F T++Q KG+SGF R ES YD FGAGH S+SA
Sbjct: 91 PMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSA 150
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
LG + +DL G K + ++ VI + AG YEA+ +AG + +VILND+ ++ P
Sbjct: 151 GLGMAVARDLGGRK-NRIVTVISNWTTMAGQVYEAMGHAGFL-DSNMVVILNDSRHTLLP 208
Query: 187 --------NVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLIS 238
++ A+S+ L+++ S ++ R+ K + FG+ +E+ +G+I
Sbjct: 209 KADSQSKMSINALSSALSKVQSSKGFRKFREAAKGLSKWFGKGMHEFAAKIDEYARGMIG 268
Query: 239 P--GVIFEELGFNYIGPIDGHDIKALEDTLNNVK--DIKGPVLLHVYTKKGK---GYKPA 291
P +FEELG YIGPIDG++I L L V D GPVL+HV T+ K G +
Sbjct: 269 PHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNS 328
Query: 292 EENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGL 351
E P + G + + ++ T+ F ++L+ AE D+ IV + M +
Sbjct: 329 EITPDE-EGPPDSSQDILKFLENGLSRTYNDCFVESLIAEAENDKHIVVVHGGMGIDRSI 387
Query: 352 VEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNL 411
F RFPDRFFD+GIAEQHA TF+AGLA GL+P STFLQRAYDQ++ DV +Q +
Sbjct: 388 QLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKI 447
Query: 412 PVTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GIYSGKPF 470
PV FAI AGLVG +GPT+ G FD++++ C+PNM+V +P +E EL D++ T + +P
Sbjct: 448 PVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDELIDMVATAAMVEDRPI 507
Query: 471 ALRYPRGA--------AYGVPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEK 522
RYP+GA AYG P +EIG E L EG++ L G V + L A
Sbjct: 508 CFRYPKGAIVGTSGTLAYGNP------LEIGKGEILAEGKEIAFLGYGDVVQRCLIARSL 561
Query: 523 LYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIM 582
L+ GI+ V NARF KP+D ++R L ++D ITVE+ T VGGFGS V +F + +G++
Sbjct: 562 LFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGT-VGGFGSHVSQFISLDGLL 620
Query: 583 KRVINLGV 590
I + +
Sbjct: 621 DGKIKVRI 628
emb|CAA15764| (AL009198) hypothetical protein Rv3379c [Mycobacterium
tuberculosis]
Length = 536
Score = 322 bits (817), Expect = 5e-87
Identities = 205/550 (37%), Positives = 283/550 (51%), Gaps = 48/550 (8%)
Query: 72 VWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFR 131
++D GHQ YP K+LT R + F TLRQ G+SG+ R ES +D H+S S++ G
Sbjct: 1 MFDTGHQTYPHKLLTGRGKDFATLRQADGLSGYPNRHESPHDWVENSHASVSLAWVDGIA 60
Query: 132 IGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHI-RPDRFIVILNDNEMSISPNVGA 190
L+G+ + VIAVIGDGALT G+A+E LNN G RP IV+LNDN S P GA
Sbjct: 61 KALALQGQCDRRVIAVIGDGALTGGVAWEGLNNLGAATRP--VIVVLNDNGRSYDPTAGA 118
Query: 191 ISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEELGFNY 250
++ +L EE G +FE +GF Y
Sbjct: 119 LAAHL----------------------------------EELRVGTPRGPNLFENMGFTY 144
Query: 251 IGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAE-ENPVKWHGVAPYKVESG 309
IGP+DGH+I L PV++H T KG+GY PAE + H + +G
Sbjct: 145 IGPVDGHNIPDTCAVLRKAAAAARPVVVHAVTSKGRGYPPAEADERDHMHACGVVDIATG 204
Query: 310 EIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAE 369
+ S +WT VF + +A+ +V +T AMR +GL ++R+P R FD GIAE
Sbjct: 205 -LASTPSQRSWTDVFEDEIARIADDRSDVVGLTAAMRLPTGLGALSRRYPHRVFDSGIAE 263
Query: 370 QHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPT 429
QH AAGLAA G PV A YSTFL RA+DQ++ D+ L LPVT +DRAG+ G DGP+
Sbjct: 264 QHLLASAAGLAAAGTHPVVAVYSTFLHRAFDQLLFDIGLHRLPVTLVLDRAGVTGPDGPS 323
Query: 430 HHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAYGVPTEGFKK 489
HHG++DL+ L CVP + P+D LR L T I + P A+R+P+GA G P +
Sbjct: 324 HHGLWDLALLACVPGFQIACPRDAPRLRQQLRTAIATAAPTAVRFPKGAP-GEPITA--E 380
Query: 490 IEIGTWEELLE-----GEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEK 544
IG + L D +++AVG + AA L +E I V VV+ ++V P+
Sbjct: 381 HTIGGLDVLHTPPPHWRPDVLLVAVGAMSRPCMDAARCLSEEQIGVTVVDPQWVWPI-SP 439
Query: 545 MLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDILR 604
L +LA R+ + VED G G+ + R R LG+P +I H +D +
Sbjct: 440 ALTELAGRHRITVCVEDAIADVGIGAHLSHHIGRTHPRTRTYTLGLPPAYIPHASRDHIL 499
Query: 605 NLVGIDAEGI 614
+ G+ I
Sbjct: 500 SSHGLTGPAI 509
emb|CAA58311| (X83392) hypothetical protein [Roseobacter denitrificans]
Length = 354
Score = 315 bits (799), Expect = 6e-85
Identities = 175/349 (50%), Positives = 230/349 (65%), Gaps = 19/349 (5%)
Query: 13 GPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNPPEDVIV 72
GP D+++ L+ +A E+R ++ S+ GGH+G SLGVVEL++A+ VF+ P D +V
Sbjct: 14 GPADLRSMSDTELRNVADELRAEVVEAVSQTGGHLGSSLGVVELSVAIHAVFDTPRDKLV 73
Query: 73 WDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRI 132
WD+GHQ YP KILT R++Q PTLRQ GISGF +R ES YD FGA HSSTSISAALGF I
Sbjct: 74 WDVGHQCYPHKILTGRRKQMPTLRQGGGISGFTKRSESEYDPFGAAHSSTSISAALGFTI 133
Query: 133 GKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAIS 192
+D+ G+ +AVIGDG+++AGMAYEALN+AGH + R VILNDNEMSI+P VGA+S
Sbjct: 134 SRDM-GQPTGDAVAVIGDGSISAGMAYEALNHAGHGK-SRMFVILNDNEMSIAPPVGAMS 191
Query: 193 TYLNRII----SGHF-----VQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIF 243
+YL+ + +G F + E R H E + E + GL + G +F
Sbjct: 192 SYLSSLSELSRAGPFGGLVAIAEGRS------MHLPEPVRDGARRAREVVTGLENRGTLF 245
Query: 244 EELGFNYIGPIDGHDIKALEDTLNNVK-DIKGPVLLHVYTKKGKGYKPAEENPVKWHGVA 302
EELGF+YIGPIDGHD+ L L K GPVL+H T KGKGY PAE + K+HGV+
Sbjct: 246 EELGFDYIGPIDGHDMAQLLSVLRGAKARATGPVLIHCCTVKGKGYAPAEGSADKYHGVS 305
Query: 303 PYKVESGEIIK-KSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSG 350
+ V +G K K++ P++T+VFG AL LAE D +VA+T AM G+G
Sbjct: 306 KFDVGTGVQAKAKANAPSYTAVFGDALTTLAEEDPSVVAVTAAMPSGTG 354
dbj|BAA76702.1| (AB023411) Orf462d [Deinococcus radiodurans]
Length = 272
Score = 265 bits (669), Expect = 1e-69
Identities = 141/267 (52%), Positives = 177/267 (65%), Gaps = 4/267 (1%)
Query: 354 FAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPV 413
F++ P R+ DVGIAE+ A T AAG+A +G+RPV A YSTFLQRAYDQV+HDVA+++L V
Sbjct: 1 FSRVHPHRYLDVGIAEEVAVTTAAGMALQGMRPVVAIYSTFLQRAYDQVLHDVAIEHLNV 60
Query: 414 TFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALR 473
TF IDRAG+VG DG TH+GVFDLS+LR +P + + PKD ELR +L G+PFA+R
Sbjct: 61 TFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQTHGRPFAIR 120
Query: 474 YPRGAAYGVPTEGFKKIEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVV 533
YPRG VP + ++ G WE L G+D VILA G + AL+AAE L VGVV
Sbjct: 121 YPRGNTAQVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDL----PGVGVV 176
Query: 534 NARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDR 593
NARFVKP+DE+MLR++ R ITVEDNTVVGGFG VLE + V LG+PD
Sbjct: 177 NARFVKPLDEEMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMNLHPTVRVLGIPDE 236
Query: 594 FIEHGKQDILRNLVGIDAEGIEKAVRD 620
F EH + + GIDA I + +
Sbjct: 237 FQEHATAESVHARAGIDAPAIRTVLAE 263
emb|CAA15790| (AL009199) hypothetical protein SC7B7.10 [Streptomyces coelicolor]
Length = 353
Score = 262 bits (663), Expect = 5e-69
Identities = 141/354 (39%), Positives = 215/354 (59%), Gaps = 7/354 (1%)
Query: 7 ILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLRVFNP 66
+L GP D+ E L +LA+E+R ++++ SK GGH+GP+LGVVELT+AL RVF
Sbjct: 3 LLTRITGPRDLDRLSLEELTQLAEEIRTFLVDAVSKTGGHLGPNLGVVELTLALHRVFES 62
Query: 67 PEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISA 126
P+D ++WD GHQ Y K+LT R++ F L+ G+SG+ + ES +D H+ST +
Sbjct: 63 PKDKVLWDTGHQSYVHKLLTGRQD-FSKLKMKGGLSGYPSQGESEHDVIENSHASTVLGW 121
Query: 127 ALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
A G + E++D+V+AVIGDGALT GMA+EALNN + ++++NDNE S +P
Sbjct: 122 ADGIAKANQVM-ERDDHVVAVIGDGALTGGMAWEALNNIAAAKDRPLVIVVNDNERSYAP 180
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQH---FGETPLRIMKLTEEFLKGLISPGVIF 243
+G ++ +L + + + + K L+ G + ++ LK I+P +F
Sbjct: 181 TIGGLANHLATLRTTDGYERFLARTKEVLERTPVVGRPLYDTLHGAKKGLKDFIAPQGMF 240
Query: 244 EELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPA-EENPVKWHGVA 302
E+LG Y+GPIDGHD++ALE L K GPV++H T+KG+GY+PA ++ ++H V
Sbjct: 241 EDLGLKYVGPIDGHDLEALESALTRAKRFGGPVIVHCLTEKGRGYQPALQDEADRFHAVG 300
Query: 303 PYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAK 356
++G I +S WTSVFG +++L + E +VAIT AM + GL +FAK
Sbjct: 301 KIHPDTGLPI-STSGADWTSVFGDEMLKLGKEREDVVAITAAMLQPVGLDKFAK 353
emb|CAA19225| (AL023702) hypothetical protein SC1C3.01 [Streptomyces coelicolor]
Length = 341
Score = 218 bits (549), Expect = 1e-55
Identities = 127/310 (40%), Positives = 183/310 (58%), Gaps = 11/310 (3%)
Query: 315 SSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACT 374
+S WTSVFG +++L + E +VAIT AM + GL +FAK FPDR +DVGIAEQH
Sbjct: 11 TSGADWTSVFGDEMLKLGKEREDVVAITAAMLQPVGLDKFAKAFPDRVYDVGIAEQHGAV 70
Query: 375 FAAGLAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHGVF 434
AAGLA G+ PV A Y+TFL RA+DQV+ DVAL VTF +DRAG+ G DG +H+G++
Sbjct: 71 SAAGLAHGGVHPVFAVYATFLNRAFDQVLMDVALHKCGVTFVLDRAGVTGTDGASHNGMW 130
Query: 435 DLSYLRCVPNMVVCAPKDEQELR-DLLYTGIYSGKPFALRYPRGA-AYGVPTEGFKKIEI 492
D+S L+ VP + + AP+D ++R L + P +R+ +GA VP G +
Sbjct: 131 DMSILQVVPGLRLAAPRDADQVRAQLREAVVVDDAPTVVRFSKGAVGPAVPAVG----RV 186
Query: 493 GTWEEL----LEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRD 548
G + L D ++++VG L A+ L K+GI VV+ R+VKP+DE M
Sbjct: 187 GGMDVLRAPGTGTPDVLLVSVGALAPMCLEVADLLNKQGISTTVVDPRWVKPVDEAM-AP 245
Query: 549 LANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDILRNLVG 608
LA R+ +TVEDN+ VGG GS V + G+ + + G+P RF++H + + +G
Sbjct: 246 LAERHRVVVTVEDNSRVGGVGSAVAQALRDAGVDVPLRDFGIPPRFLDHASRAEVLAEIG 305
Query: 609 IDAEGIEKAV 618
+ A I + V
Sbjct: 306 LTAPDIARQV 315
gb|AAD03740.2| (AF111814) 1-deoxy-D-xylulose 5-phosphate synthase [Plasmodium
falciparum]
Length = 1205
Score = 190 bits (477), Expect = 4e-47
Identities = 129/379 (34%), Positives = 201/379 (52%), Gaps = 60/379 (15%)
Query: 145 IAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAISTYLNRIISGHFV 204
IA+IGDG LT GMA EALN + + ++I NDN +S A+S NR I G
Sbjct: 623 IAIIGDGGLTGGMALEALNYISFLN-SKILIIYNDNGQ-VSLPTNAVSISGNRPI-GSIS 679
Query: 205 QETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALED 264
+ N + G+ ++ K +E IFE L ++YIG ++G++ + L
Sbjct: 680 DHLHYFVSNIEANAGDN--KLSKNAKE--------NNIFENLNYDYIGVVNGNNTEELFK 729
Query: 265 TLNNVKD--IKGPVLLHVYTKKGKGYKPAEE-----NPVKWHGVAPY------------- 304
LNN+K+ +K +LHV TKK + ++ + +K + + P+
Sbjct: 730 VLNNIKENKLKRATVLHVRTKKSNDFINSKSPISILHSIKKNEIFPFDTTILNGNIHKEN 789
Query: 305 KVE----------------------SGEIIKKS---SPPTWTSVFGKALVELAERDEKIV 339
K+E + EIIK S T+T ++ +++ ++D I+
Sbjct: 790 KIEEEKNVSSSTKYDVNNKNNKNNDNSEIIKYEDMFSKETFTDIYTNEMLKYLKKDRNII 849
Query: 340 AITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAA-EGLRPVAAYYSTFLQRA 398
++PAM GSGLV+ ++R+P+ +DVGIAEQH+ TFAA +A + L+ YSTFLQRA
Sbjct: 850 FLSPAMLGGSGLVKISERYPNNVYDVGIAEQHSVTFAAAMAMNKKLKIQLCIYSTFLQRA 909
Query: 399 YDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQEL-R 457
YDQ+IHD+ LQN+P+ I R+GLVG+DG TH G++DLSYL + N + +P ++ +L R
Sbjct: 910 YDQIIHDLNLQNIPLKVIIGRSGLVGEDGATHQGIYDLSYLGTLNNAYIISPSNQVDLKR 969
Query: 458 DLLYTGIYSGKPFALRYPR 476
L + + +R PR
Sbjct: 970 ALRFAYLDKDHSVYIRIPR 988
Score = 117 bits (290), Expect = 3e-25
Identities = 74/196 (37%), Positives = 106/196 (53%), Gaps = 12/196 (6%)
Query: 1 MLEKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIAL 60
+L + +LK P D+K + L LA E++ ++ + + GGH L +E+ + L
Sbjct: 413 ILHYFPLLKLINNPSDLKKLKKQYLPLLAHELKIFLFFIVNITGGHFSSVLSSLEIQLLL 472
Query: 61 LRVFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHS 120
L +FN P D +++DIGHQ Y KILT RK F +LR KGISGFL ESIYD FGAGHS
Sbjct: 473 LYIFNQPYDNVIYDIGHQAYVHKILTGRKLLFLSLRNKKGISGFLNIFESIYDKFGAGHS 532
Query: 121 STSISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDN 180
STS+SA G+ + KE Y G+G + E +NA +R N
Sbjct: 533 STSLSAIQGYYEAEWQVKNKEKY-----GNGDI------EISDNANVTNNERIFQKGIHN 581
Query: 181 EMSISPNVGAISTYLN 196
+ +I+ N+ + Y+N
Sbjct: 582 DNNINNNINN-NNYIN 596
gi|4139262 (AF111814) 1-deoxy-D-xylulose 5-phosphate synthase [Plasmodium
falciparum]
Length = 710
Score = 190 bits (477), Expect = 4e-47
Identities = 129/379 (34%), Positives = 201/379 (52%), Gaps = 60/379 (15%)
Query: 145 IAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAISTYLNRIISGHFV 204
IA+IGDG LT GMA EALN + + ++I NDN +S A+S NR I G
Sbjct: 214 IAIIGDGGLTGGMALEALNYISFLN-SKILIIYNDNGQ-VSLPTNAVSISGNRPI-GSIS 270
Query: 205 QETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALED 264
+ N + G+ ++ K +E IFE L ++YIG ++G++ + L
Sbjct: 271 DHLHYFVSNIEANAGDN--KLSKNAKE--------NNIFENLNYDYIGVVNGNNTEELFK 320
Query: 265 TLNNVKD--IKGPVLLHVYTKKGKGYKPAEE-----NPVKWHGVAPY------------- 304
LNN+K+ +K +LHV TKK + ++ + +K + + P+
Sbjct: 321 VLNNIKENKLKRATVLHVRTKKSNDFINSKSPISILHSIKKNEIFPFDTTILNGNIHKEN 380
Query: 305 KVE----------------------SGEIIKKS---SPPTWTSVFGKALVELAERDEKIV 339
K+E + EIIK S T+T ++ +++ ++D I+
Sbjct: 381 KIEEEKNVSSSTKYDVNNKNNKNNDNSEIIKYEDMFSKETFTDIYTNEMLKYLKKDRNII 440
Query: 340 AITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAA-EGLRPVAAYYSTFLQRA 398
++PAM GSGLV+ ++R+P+ +DVGIAEQH+ TFAA +A + L+ YSTFLQRA
Sbjct: 441 FLSPAMLGGSGLVKISERYPNNVYDVGIAEQHSVTFAAAMAMNKKLKIQLCIYSTFLQRA 500
Query: 399 YDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQEL-R 457
YDQ+IHD+ LQN+P+ I R+GLVG+DG TH G++DLSYL + N + +P ++ +L R
Sbjct: 501 YDQIIHDLNLQNIPLKVIIGRSGLVGEDGATHQGIYDLSYLGTLNNAYIISPSNQVDLKR 560
Query: 458 DLLYTGIYSGKPFALRYPR 476
L + + +R PR
Sbjct: 561 ALRFAYLDKDHSVYIRIPR 579
Score = 117 bits (290), Expect = 3e-25
Identities = 74/196 (37%), Positives = 106/196 (53%), Gaps = 12/196 (6%)
Query: 1 MLEKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIAL 60
+L + +LK P D+K + L LA E++ ++ + + GGH L +E+ + L
Sbjct: 4 ILHYFPLLKLINNPSDLKKLKKQYLPLLAHELKIFLFFIVNITGGHFSSVLSSLEIQLLL 63
Query: 61 LRVFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHS 120
L +FN P D +++DIGHQ Y KILT RK F +LR KGISGFL ESIYD FGAGHS
Sbjct: 64 LYIFNQPYDNVIYDIGHQAYVHKILTGRKLLFLSLRNKKGISGFLNIFESIYDKFGAGHS 123
Query: 121 STSISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDN 180
STS+SA G+ + KE Y G+G + E +NA +R N
Sbjct: 124 STSLSAIQGYYEAEWQVKNKEKY-----GNGDI------EISDNANVTNNERIFQKGIHN 172
Query: 181 EMSISPNVGAISTYLN 196
+ +I+ N+ + Y+N
Sbjct: 173 DNNINNNINN-NNYIN 187
sp|Q58092|TKTC_METJA PUTATIVE TRANSKETOLASE C-TERMINAL SECTION (TK)
>gi|2129318|pir||G64384 transketolase (EC 2.2.1.1) -
Methanococcus jannaschii >gi|1591394 (U67515)
transketolase'' [Methanococcus jannaschii]
Length = 316
Score = 178 bits (447), Expect = 1e-43
Identities = 106/303 (34%), Positives = 166/303 (53%), Gaps = 6/303 (1%)
Query: 324 FGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEG 383
+G+ L+EL ++ E +V + + + FAK FP+RFF+ G+AEQ+ AAGLA G
Sbjct: 15 YGETLIELGKKYENLVVLDADLSGSTQTAMFAKEFPERFFNAGVAEQNMIGMAAGLATTG 74
Query: 384 LRPVAAYYSTFLQ-RAYDQVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRC 441
A+ +S F RA++ + + VA L V AG+ VG+DG +H D++ +R
Sbjct: 75 KIVFASSFSMFASGRAWEIIRNLVAYPKLNVKIVATHAGITVGEDGASHQMCEDIAIMRA 134
Query: 442 VPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAYGV-PTEGFKKIEIGTWEELLE 500
+PNMVV AP D ++++ T P +R PR + E EIG + L++
Sbjct: 135 IPNMVVIAPTDYYHTKNVIRTIAEYKGPVYVRMPRRDTEIIYENEEEATFEIGKGKILVD 194
Query: 501 GEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVE 560
GED I+A G V +ALRA E L + GI +V +KP+DE++++ D +TVE
Sbjct: 195 GEDLTIIATGEEVPEALRAGEILKENGISAEIVEMATIKPIDEEIIK---KSKDFVVTVE 251
Query: 561 DNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVRD 620
D++++GG G V E A G+ K+++ +G+ D F GK D L G+D E I K + +
Sbjct: 252 DHSIIGGLGGAVAEVIASNGLNKKLLRIGINDVFGRSGKADELLKYYGLDGESIAKRIME 311
Query: 621 ALK 623
+K
Sbjct: 312 EMK 314
emb|CAB49368.1| (AJ248284) transketolase C-TERMINAL SECTION [Pyrococcus abyssi]
Length = 317
Score = 157 bits (393), Expect = 3e-37
Identities = 94/267 (35%), Positives = 147/267 (54%), Gaps = 3/267 (1%)
Query: 324 FGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEG 383
FG+ LVE+ +++ ++ + ++ + V F +FPDRF VGI+EQ AAGLA G
Sbjct: 9 FGRTLVEIGRKNKDVIVVDADVKNSTKTVYFENQFPDRFIQVGISEQDMIGTAAGLAIAG 68
Query: 384 LRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGD-DGPTHHGVFDLSYLRCV 442
P+ + ++ FL RA++Q+ + +A NL V +G DG +H + D++ +R +
Sbjct: 69 KIPIVSAFAAFLMRAWEQIRNTIARDNLNVKIVATHSGFSDFLDGSSHQCLEDIALMRVL 128
Query: 443 PNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAYGVPTEGFKKIEIGTWEELLEGE 502
PNM V P D R LLY + P +R R A V +G +I++G L +G
Sbjct: 129 PNMKVVVPADAYATRALLYEIVEDHGPAYMRLGRDFAPRVYEDG-DEIKLGKANILRDGS 187
Query: 503 DCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVEDN 562
D + +A G V AL AE L GI GV++ VKP+DE+ L +LA + + IT+E++
Sbjct: 188 DILFVASGVMVSVALEVAENLKGVGIDAGVLDMHTVKPLDERTLINLARKVNLVITLEEH 247
Query: 563 TVVGGFGSGVLEFFAREGIMKRVINLG 589
T+ GG G V E + E + +RVI +G
Sbjct: 248 TIFGGLGGAVAEALS-EKMPRRVIRIG 273
sp|P55573|Y4MN_RHISN HYPOTHETICAL TRANSKETOLASE FAMILY PROTEIN Y4MN >gi|2182531
(AE000085) Y4mN [Rhizobium sp. NGR234]
Length = 345
Score = 157 bits (393), Expect = 3e-37
Identities = 100/314 (31%), Positives = 159/314 (49%), Gaps = 3/314 (0%)
Query: 312 IKKSSPPTWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQH 371
I + PT + FG AL LAE+D+++V ++ + + + L F PDRF+ +G+AEQ
Sbjct: 30 IAGADQPTRPAPFGHALSALAEKDDRVVGLSADLAKYTDLHVFRAAHPDRFYQMGMAEQL 89
Query: 372 ACTFAAGLAAEGLRPVAAYYSTFL-QRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPTH 430
AAG+A EGL+P Y+ F +RAYD + +A + L V GL GP+H
Sbjct: 90 LMMSAAGMAREGLQPWVTTYAVFASRRAYDFICLAIAEEMLDVKVVCALPGLTTGYGPSH 149
Query: 431 HGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYSGKPFALRYPRGAAYGVPTEGFKKI 490
D++ R +PN+ + P D E+ + P +R RG V E +
Sbjct: 150 QATEDIAMFRGMPNLTIIDPCDASEIEQAVPAIAAHEGPVYMRLLRGNVPLVLEEYGYRF 209
Query: 491 EIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDE-KMLRDL 549
E+G + L +G D +I++ G +AL AAE+L K GI GV++ +KP+DE +L +
Sbjct: 210 ELGKAKLLRDGRDTLIISSGLMTMRALEAAEELRKNGIDAGVLHVPTIKPLDEATILAEC 269
Query: 550 ANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMKRVI-NLGVPDRFIEHGKQDILRNLVG 608
A + + E++TV+GG G V R + +G+PD F+E G L ++ G
Sbjct: 270 ARQGRLVVVAENHTVIGGLGEAVAATLMRSAVRPAAFRQIGLPDAFLEAGALPTLHDMYG 329
Query: 609 IDAEGIEKAVRDAL 622
I I +++ L
Sbjct: 330 ISTTKIVAQIKEWL 343
gb|AAD36826.1|AE001814_8 (AE001814) transketolase, putative [Thermotoga maritima]
Length = 635
Score = 143 bits (358), Expect = 3e-33
Identities = 163/644 (25%), Positives = 283/644 (43%), Gaps = 63/644 (9%)
Query: 21 DYETLQKLAQEVRDYIINVTS-KNGGHVGPSLGVVELTIALLR------VFNPPEDVIVW 73
+ + L++L + R I+ +T N GH G S+ ++L + + + V +P D IV
Sbjct: 13 ELKELKELGRLCRGDILKMTYIANSGHPGGSMSSIDLYLTVFKYAKLRPVDDPARDRIVI 72
Query: 74 DIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDA----------FGAGHSSTS 123
GH P + F L + ++GF R S+++ + G+
Sbjct: 73 SHGHTS-PGVYAAMARLGFVDLDEV--LAGF-RHPASVFEGHVTRGVGIIDWTTGNLGQG 128
Query: 124 ISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMS 183
+SA LGF + G K+ +V ++ D G EA A VI++ N+
Sbjct: 129 LSAGLGFALASRFTG-KDYHVFVLMSDAEQAKGQVAEARRVAKKYGVTNLTVIIDYNDAQ 187
Query: 184 ISPNVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFL-------KGL 236
IS G + I +++ + + I+ + + L + + E+ L K +
Sbjct: 188 IS---GRARDVMPVNIKENYLADGWRVIEIDGHDYEQIYLALKEAVEDELNPVAIIAKTV 244
Query: 237 ISPGVIFEELGFNYIG-PIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGKGYKPAEENP 295
+ GV F E Y G P++ +++ L D+ VY +K K P E++
Sbjct: 245 MGKGVSFMENEVKYHGKPLNREELEKALAELGIENDVD------VYIEKRKQL-PVEKHK 297
Query: 296 VKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEK------IVAITPAMREGS 349
K + P K+++GE I +SP S FGKA+++L +++ IVA+ ++
Sbjct: 298 -KVYKTYPIKIDTGEPITYTSPTDNRSAFGKAILDLVKKNVNNPETTPIVAVDCDLKGSV 356
Query: 350 GLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTF-LQRAYDQVIHDV-A 407
L K FP+R +VG+ E +A A L+AEG+ A + F + Y+Q H + A
Sbjct: 357 KLDLLDKEFPERLLEVGVQEHNAAAMAGALSAEGVITFFADFGVFGISETYNQ--HRLNA 414
Query: 408 LQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYTGIYS 466
+ + + GL VG+DG THHG+ +S V P D + ++
Sbjct: 415 INGTNLKVVVTHCGLNVGEDGKTHHGLDYVSGPMNWYGFKVIVPGDPNQTDRVVRYAAKE 474
Query: 467 GKPFALRYPRGAAYGVPTEGFKKI-------EIGTWEELLEGEDCVILAVGYPVYQALRA 519
F + R + E K E G + + +G+D VI+ G + +A+ A
Sbjct: 475 YGNFVIAMGRSKLPIILDENGKPFFGEGYTFEYGKIDVVRKGDDAVIITYGSTLCEAVNA 534
Query: 520 AEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFARE 579
A++L KEG+ V V+N +D + L+ + + + VED+ V G GS +
Sbjct: 535 ADELKKEGVNVAVLNVSCPVDLDIETLKMVDGK--PVLVVEDHNVFTGLGSFLGTTLLEN 592
Query: 580 GIM-KRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVRDAL 622
GI+ K+ + +GVP+ F G +L L G+D +GI +R+ L
Sbjct: 593 GIIPKKYVRVGVPE-FAVSGSYTMLYKLYGLDKDGIISRLREML 635
emb|CAA22034| (AL033505) transketolase [Streptomyces coelicolor]
Length = 615
Score = 134 bits (333), Expect = 3e-30
Identities = 161/653 (24%), Positives = 253/653 (38%), Gaps = 110/653 (16%)
Query: 25 LQKLAQEVR-DYIINVTSKNGGHVGPSLGVVELTIALL---------RVFNPPEDVIVWD 74
L L Q++R D + + GH S+ +L LL R +P D V
Sbjct: 6 LVDLGQQLRVDSVRAAAAAGSGHPTSSMSAADLMAVLLANHLRYDFERPAHPGNDRFVLS 65
Query: 75 IGH------QGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSSTSISAAL 128
GH + D +E +Q + G + + G + +
Sbjct: 66 KGHASPLLYSAFKAAGAIDDEELLTFRKQGSRLEGHPTPQRLPWVETATGSLGQGLPVGV 125
Query: 129 GFRI-GKDLKGEKEDYVIAVI-GDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISP 186
G + GK L + DY + V+ GD L G +EA +AGH D VI++ N +
Sbjct: 126 GIALSGKRL--DHTDYRVWVLCGDSELAEGSIWEAAEHAGHEHLDNLTVIVDVNRLG--- 180
Query: 187 NVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEEL 246
GH + ++ + F H E
Sbjct: 181 -------QRGPTRHGHDLDAYARRFRAFEWHTIE-------------------------- 207
Query: 247 GFNYIGPIDGHDIKALEDTLNNVKDIKG-PVLLHVYTKKGKGYKPAEENPVKWHG----- 300
+DGHD+ A++ KG P + T KGKG + E+ + HG
Sbjct: 208 -------VDGHDVDAVDRAYGEALSTKGQPTAIIARTLKGKGVRAVEDREGQ-HGKPLPE 259
Query: 301 ---------------VAPYKVESGEIIKKSSP-----PTW--------TSVFGKALVELA 332
V + E ++ + P + + FG+AL +
Sbjct: 260 AEEAVAELGGPRDIRVRVHAPEDARSLRSTGTGQTELPRYGLGDEVATRNAFGEALAAVG 319
Query: 333 ERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYS 392
+VA+ + + + FAK P+R+F+ IAEQ A G+AA G P A ++
Sbjct: 320 TARGDVVALDGEVGDSTRAEFFAKEHPERYFECYIAEQQMVAAAVGMAARGWVPFATTFA 379
Query: 393 TFLQRAYDQVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPK 451
FL RAYD + ++ + AG+ +G DGP+ G+ DL+ +R + V P
Sbjct: 380 AFLTRAYD-FVRMASISGAGINLVGSHAGVAIGQDGPSQMGLEDLAMMRAIHGSTVLYPC 438
Query: 452 DEQELRDLLYTGIYSGKPFALRYPRGAA---YGVPTEGFKKIEIGTWEELL--EGEDCVI 506
D + L+ LR RG + YG P E F +G + L + + +
Sbjct: 439 DANQAARLVAEMAGLEGIRYLRTSRGESKVIYG-PDEEFP---VGGSKVLRSSDADRLTV 494
Query: 507 LAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVG 566
+A G +++AL AA+ L +GI V V++ VKP+D LR A +TVED+ G
Sbjct: 495 VAAGVTLHEALAAADALGADGIPVRVIDLYSVKPVDRATLRAAAEETGCLVTVEDHRREG 554
Query: 567 GFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVR 619
G G VL+ F+ + R++ L V + L + GIDAE IE A R
Sbjct: 555 GIGDAVLDAFSDGRPVPRLVRLAVTTMPGSATPAEEL-HAAGIDAESIEAAAR 606
dbj|BAA79551.1| (AP000060) 322aa long hypothetical transketolase [Aeropyrum pernix]
Length = 322
Score = 129 bits (320), Expect = 9e-29
Identities = 97/308 (31%), Positives = 146/308 (46%), Gaps = 9/308 (2%)
Query: 319 TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAG 378
++ G+ L LA E +V + +G +E + P R ++GI+EQ AAG
Sbjct: 11 SYRKALGRLLARLASELEDLVVLDADTLRSTGAIEVYRSAPRRVLNMGISEQDLIGTAAG 70
Query: 379 LAAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGD-DGPTHHGVFDLS 437
+A GLRPV + FL R ++Q+ + V L V GL DG +H + DL+
Sbjct: 71 IALAGLRPVVTGFGAFLMRGWEQIRNTVDRDGLNVKIVATHTGLSPHVDGSSHQVLEDLA 130
Query: 438 YLRCVPNMVVCAPKDEQELRDLLYTGI--YSGKPFALRYPRGAAYGVPTEGFKKIEIGTW 495
+R + V +P D+ + + + Y G P +R R A+ V +E G
Sbjct: 131 LMRSLARTAVFSPADDVATVETVEWLVRRYRG-PAYVRLGRDNAFRVYSEEEFTFRPGGG 189
Query: 496 EELLE-GEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYD 554
E L+E GE +LA G V +L AA L EG+RVGVV+ +KP +++ + A R
Sbjct: 190 EVLVEPGEAVTLLATGPMVGVSLAAAALLRSEGLRVGVVDVYSIKPAPRRLVLEAAERSR 249
Query: 555 TFITVEDNTVVGGFGSGVLEFFAREGIMKRVINLGVPDRFIEHGKQD---ILRNLVGIDA 611
+TVE++ VGG G V A EG R +GVP +D +LR+L +D
Sbjct: 250 LLVTVEEHRTVGGLGDVVSSILAEEGACARQARIGVPPGVYGSSSRDYMSLLRHL-RLDP 308
Query: 612 EGIEKAVR 619
E + VR
Sbjct: 309 ESVAARVR 316
ref|NP_001055.1|| transketolase (Wernicke-Korsakoff syndrome)
>gi|1729976|sp|P29401|TKT_HUMAN TRANSKETOLASE (TK)
>gi|1297297 (U55017) transketolase [Homo sapiens]
Length = 623
Score = 120 bits (299), Expect = 3e-26
Identities = 137/526 (26%), Positives = 219/526 (41%), Gaps = 61/526 (11%)
Query: 123 SISAALGFRIGKDLKG---EKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILN 178
S+ LG G G +K Y V ++GDG L+ G +EA+ A + D + IL+
Sbjct: 124 SLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILD 183
Query: 179 DNEMSIS---PNVGAISTYLNR---------IISGHFVQETRQKIKNFLQHFGETPLRIM 226
N + S P + Y R I+ GH V+E + FG+ +
Sbjct: 184 INRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEE-------LCKAFGQAKHQPT 236
Query: 227 KLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYT---- 282
+ + KG GV +E P K++ ++ +Y+
Sbjct: 237 AIIAKTFKGRGITGVEDKESWHGKPLP----------------KNMAEQIIQEIYSQIQS 280
Query: 283 -KKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAI 341
KK P E+ P +A ++ S K +G+AL +L ++I+A+
Sbjct: 281 KKKILATPPQEDAPSV--DIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIAL 338
Query: 342 TPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLR-PVAAYYSTFLQRAYD 400
+ + F K PDRF + IAEQ+ + A G A P + ++ F RA+D
Sbjct: 339 DGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFD 398
Query: 401 QVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDL 459
Q I A+ + G+ +G+DGP+ + DL+ R VP V P D
Sbjct: 399 Q-IRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKA 457
Query: 460 LYTGIYSGKPFALR--YPRGAAYGVPTEGFKKIEIGTWEELLEGED--CVILAVGYPVYQ 515
+ + +R P A E F ++G + +L+ +D ++ G +++
Sbjct: 458 VELAANTKGICFIRTSRPENAIIYNNNEDF---QVGQAKVVLKSKDDQVTVIGAGVTLHE 514
Query: 516 ALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLAN-RYDTFITVEDNTVVGGFGSGVLE 574
AL AAE L KE I + V++ +KP+D K++ D A +TVED+ GG G V
Sbjct: 515 ALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSS 574
Query: 575 FFARE-GIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVR 619
E GI V +L V +R GK L + GID + I +AVR
Sbjct: 575 AVVGEPGI--TVTHLAV-NRVPRSGKPAELLKMFGIDRDAIAQAVR 617
gi|388891 (L12711) transketolase [Homo sapiens]
Length = 623
Score = 120 bits (298), Expect = 3e-26
Identities = 134/526 (25%), Positives = 218/526 (40%), Gaps = 61/526 (11%)
Query: 123 SISAALGFRIGKDLKG---EKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILN 178
S+ LG G G +K Y V ++GDG L+ G +EA+ A + D + IL+
Sbjct: 124 SLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILD 183
Query: 179 DNEMSIS---PNVGAISTYLNR---------IISGHFVQETRQKIKNFLQHFGETPLRIM 226
N + S P + Y R I+ GH V+E + FG+ +
Sbjct: 184 INRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEE-------LCKAFGQAKHQPT 236
Query: 227 KLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYT---- 282
+ + KG GV +E P K++ ++ +Y+
Sbjct: 237 AIIAKTFKGRGITGVEDKESWHGKPLP----------------KNMAEQIIQEIYSQIQS 280
Query: 283 -KKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAI 341
KK P E+ P +A ++ S K +G+AL +L ++I+A+
Sbjct: 281 KKKILATPPQEDAPSV--DIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIAL 338
Query: 342 TPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLR-PVAAYYSTFLQRAYD 400
+ + F K PDRF + IAEQ+ + A G A P + ++ F RA+D
Sbjct: 339 DGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFD 398
Query: 401 QVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDL 459
Q I A+ + G+ +G+DGP+ + DL+ R VP V P D
Sbjct: 399 Q-IRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKA 457
Query: 460 LYTGIYSGKPFALR--YPRGAAYGVPTEGFKKIEIGTWEELLEGED--CVILAVGYPVYQ 515
+ + +R P A E F ++G + +L+ +D ++ G +++
Sbjct: 458 VELAANTKGICFIRTSRPENAIIYNNNEDF---QVGQAKVVLKSKDDQVTVIGAGVTLHE 514
Query: 516 ALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLAN-RYDTFITVEDNTVVGGFGSGVLE 574
AL AAE L KE I + V++ +KP+D K++ D A +TVED+ GG G V
Sbjct: 515 ALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSS 574
Query: 575 FFARE-GIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVR 619
E GI + + + +R GK L + GID + I +AVR
Sbjct: 575 AVVGEPGITVKTMAV---NRVPRSGKPAELLKMFGIDRDAIAQAVR 617
gb|AAD56390.1|AF182286_1 (AF182286) 1-deoxy-D-xylulose-5-phosphate synthase [Artemisia
annua]
Length = 128
Score = 120 bits (297), Expect = 5e-26
Identities = 65/128 (50%), Positives = 84/128 (64%), Gaps = 3/128 (2%)
Query: 250 YIGPIDGHDIKALEDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHGVAPYKVE 307
YIGP+DGH I L L VK K GPVL+HV T+KG+GY AE+ K+HGV +
Sbjct: 1 YIGPVDGHSIDDLVAILKEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVGKFDPA 60
Query: 308 SGEIIKKSSPP-TWTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVG 366
+G+ K S+P ++T+ F +AL+ AE D+KIV I AM G+G+ F +RFP R FDVG
Sbjct: 61 TGKQFKSSAPTQSYTTYFAEALIAEAEADKKIVGIHAAMGGGTGMNLFLRRFPTRCFDVG 120
Query: 367 IAEQHACT 374
IAEQHA T
Sbjct: 121 IAEQHAVT 128
pir||A45050 transketolase (EC 2.2.1.1) - human >gi|37267|emb|CAA47919| (X67688)
transketolase [Homo sapiens]
Length = 623
Score = 117 bits (291), Expect = 2e-25
Identities = 136/526 (25%), Positives = 218/526 (40%), Gaps = 61/526 (11%)
Query: 123 SISAALGFRIGKDLKG---EKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILN 178
S+ LG G G +K Y V ++GDG L+ G +EA+ A + D + IL+
Sbjct: 124 SLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILD 183
Query: 179 DNEMSIS---PNVGAISTYLNR---------IISGHFVQETRQKIKNFLQHFGETPLRIM 226
N + S P + Y R I+ GH V+E + FG+ +
Sbjct: 184 INRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEE-------LCKAFGQAKHQPT 236
Query: 227 KLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYT---- 282
+ + KG GV +E P K++ ++ +Y+
Sbjct: 237 AIIAKTFKGRGITGVEDKESWHGKPLP----------------KNMAEQIIQEIYSQIQS 280
Query: 283 -KKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAI 341
KK P E+ P +A ++ S K +G+AL +L ++I+A+
Sbjct: 281 KKKILATPPQEDAPSV--DIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIAL 338
Query: 342 TPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLR-PVAAYYSTFLQRAYD 400
+ + F K PDRF + IAEQ+ + A G A P + ++ F RA+D
Sbjct: 339 DGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFD 398
Query: 401 QVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDL 459
Q I A+ + G+ +G+DG + + DL+ R VP V P D
Sbjct: 399 Q-IRMAAISESNINLCGSHCGVSIGEDGASQMALEDLAMFRSVPTSTVFYPSDGVATEKA 457
Query: 460 LYTGIYSGKPFALR--YPRGAAYGVPTEGFKKIEIGTWEELLEGED--CVILAVGYPVYQ 515
+ + +R P A E F ++G + +L+ +D ++ G +++
Sbjct: 458 VELAANTKGICFIRTSRPENAIIYNNNEDF---QVGQAKVVLKSKDDQVTVIGAGVTLHE 514
Query: 516 ALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLAN-RYDTFITVEDNTVVGGFGSGVLE 574
AL AAE L KE I + V++ +KP+D K++ D A +TVED+ GG G V
Sbjct: 515 ALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSS 574
Query: 575 FFARE-GIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVR 619
E GI V +L V +R GK L + GID + I +AVR
Sbjct: 575 AVVGEPGI--TVTHLAV-NRVPRSGKPAELLKMFGIDRDAIAQAVR 617
sp|P50137|TKT_RAT TRANSKETOLASE (TK)
Length = 623
Score = 116 bits (287), Expect = 7e-25
Identities = 133/532 (25%), Positives = 219/532 (41%), Gaps = 61/532 (11%)
Query: 123 SISAALGFRIGKDLKG---EKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILN 178
S+ LG G G +K Y V ++GDG ++ G +EA+ AG + D + I +
Sbjct: 124 SLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIFD 183
Query: 179 DNEMSIS---PNVGAISTYLNR---------IISGHFVQETRQKIKNFLQHFGETPLRIM 226
N + S P + Y R I+ GH V+E + FG+ +
Sbjct: 184 INRLGQSDPAPLQHQVDVYQKRCEAFGWHAIIVDGHSVEE-------LCKAFGQAKHQPT 236
Query: 227 KLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYT---- 282
+ + KG G+ +E P K++ ++ +Y+
Sbjct: 237 AIIAKTFKGRGITGIEDKEAWHGKPLP----------------KNMAEQIIQEIYSQVQS 280
Query: 283 -KKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAI 341
KK P E+ P +A ++ + K +G AL +L ++I+A+
Sbjct: 281 KKKILATPPQEDAPSV--DIANIRMPTPPNYKVGDKIATRKAYGLALAKLGHASDRIIAL 338
Query: 342 TPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLR-PVAAYYSTFLQRAYD 400
+ + F K PDRF + IAEQ+ + A G A P + ++ F RA+D
Sbjct: 339 DGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFD 398
Query: 401 QVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDL 459
Q I A+ + G+ +G+DGP+ + DL+ R VP V P D
Sbjct: 399 Q-IRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPMSTVFYPSDGVATEKA 457
Query: 460 LYTGIYSGKPFALRY--PRGAAYGVPTEGFKKIEIGTWEELLEGED--CVILAVGYPVYQ 515
+ + +R P A E F ++G + +L+ +D ++ G +++
Sbjct: 458 VELAANTKGICFIRTSRPENAIIYSNNEDF---QVGQAKVVLKSKDDQVTVIGAGVTLHE 514
Query: 516 ALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLAN-RYDTFITVEDNTVVGGFGSGVLE 574
AL AAE L KE I V V++ +KP+D+K++ D A +TVED+ GG G V
Sbjct: 515 ALAAAEMLKKEKIGVRVLDPFTIKPLDKKLILDCARATKGRILTVEDHYYEGGIGEAVSA 574
Query: 575 FFARE-GIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVRDALKGG 625
E G+ V L V + GK L + GID + I +AV+ + G
Sbjct: 575 VVVGEPGV--TVTRLAV-SQVPRSGKPAELLKMFGIDKDAIVQAVKGLVTKG 623
gi|485267 (U09256) transketolase [Rattus norvegicus]
Length = 655
Score = 116 bits (287), Expect = 7e-25
Identities = 133/532 (25%), Positives = 219/532 (41%), Gaps = 61/532 (11%)
Query: 123 SISAALGFRIGKDLKG---EKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILN 178
S+ LG G G +K Y V ++GDG ++ G +EA+ AG + D + I +
Sbjct: 156 SLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIFD 215
Query: 179 DNEMSIS---PNVGAISTYLNR---------IISGHFVQETRQKIKNFLQHFGETPLRIM 226
N + S P + Y R I+ GH V+E + FG+ +
Sbjct: 216 INRLGQSDPAPLQHQVDVYQKRCEAFGWHAIIVDGHSVEE-------LCKAFGQAKHQPT 268
Query: 227 KLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYT---- 282
+ + KG G+ +E P K++ ++ +Y+
Sbjct: 269 AIIAKTFKGRGITGIEDKEAWHGKPLP----------------KNMAEQIIQEIYSQVQS 312
Query: 283 -KKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAI 341
KK P E+ P +A ++ + K +G AL +L ++I+A+
Sbjct: 313 KKKILATPPQEDAPSV--DIANIRMPTPPNYKVGDKIATRKAYGLALAKLGHASDRIIAL 370
Query: 342 TPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLR-PVAAYYSTFLQRAYD 400
+ + F K PDRF + IAEQ+ + A G A P + ++ F RA+D
Sbjct: 371 DGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFD 430
Query: 401 QVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDL 459
Q I A+ + G+ +G+DGP+ + DL+ R VP V P D
Sbjct: 431 Q-IRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPMSTVFYPSDGVATEKA 489
Query: 460 LYTGIYSGKPFALRY--PRGAAYGVPTEGFKKIEIGTWEELLEGED--CVILAVGYPVYQ 515
+ + +R P A E F ++G + +L+ +D ++ G +++
Sbjct: 490 VELAANTKGICFIRTSRPENAIIYSNNEDF---QVGQAKVVLKSKDDQVTVIGAGVTLHE 546
Query: 516 ALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLAN-RYDTFITVEDNTVVGGFGSGVLE 574
AL AAE L KE I V V++ +KP+D+K++ D A +TVED+ GG G V
Sbjct: 547 ALAAAEMLKKEKIGVRVLDPFTIKPLDKKLILDCARATKGRILTVEDHYYEGGIGEAVSA 606
Query: 575 FFARE-GIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVRDALKGG 625
E G+ V L V + GK L + GID + I +AV+ + G
Sbjct: 607 VVVGEPGV--TVTRLAV-SQVPRSGKPAELLKMFGIDKDAIVQAVKGLVTKG 655
ref|NP_033414.1|| transketolase >gi|730956|sp|P40142|TKT_MOUSE TRANSKETOLASE (TK)
(P68) >gi|452486 (U05809) transketolase [Mus musculus]
Length = 623
Score = 114 bits (282), Expect = 3e-24
Identities = 131/532 (24%), Positives = 219/532 (40%), Gaps = 61/532 (11%)
Query: 123 SISAALGFRIGKDLKG---EKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILN 178
S+ LG G G +K Y V ++GDG ++ G +EA+ AG + D + I +
Sbjct: 124 SLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIFD 183
Query: 179 DNEMSIS---PNVGAISTYLNR---------IISGHFVQETRQKIKNFLQHFGETPLRIM 226
N + S P + Y R I+ GH V+E + FG+ +
Sbjct: 184 INRLGQSDPAPLQHQVDIYQKRCEAFGWHTIIVDGHSVEE-------LCKAFGQAKHQPT 236
Query: 227 KLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYT---- 282
+ + KG G+ +E P K++ ++ +Y+
Sbjct: 237 AIIAKTFKGRGITGIEDKEAWHGKPLP----------------KNMAEQIIQEIYSQVQS 280
Query: 283 -KKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAI 341
KK P E+ P +A ++ + K +G AL +L ++I+A+
Sbjct: 281 KKKILATPPQEDAPSV--DIANIRMPTPPSYKVGDKIATRKAYGLALAKLGHASDRIIAL 338
Query: 342 TPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAA-EGLRPVAAYYSTFLQRAYD 400
+ + F K PDRF + IAEQ+ + A G A + P + ++ F RA+D
Sbjct: 339 DGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFD 398
Query: 401 QVIHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDL 459
Q I A+ + G+ +G+DGP+ + DL+ R VP V P D
Sbjct: 399 Q-IRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPMSTVFYPSDGVATEKA 457
Query: 460 LYTGIYSGKPFALR--YPRGAAYGVPTEGFKKIEIGTWEELLEGED--CVILAVGYPVYQ 515
+ + +R P A E F ++G + +L+ +D ++ G +++
Sbjct: 458 VELAANTKGICFIRTSRPENAIIYSNNEDF---QVGQAKVVLKSKDDQVTVIGAGVTLHE 514
Query: 516 ALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLAN-RYDTFITVEDNTVVGGFGSGVLE 574
AL AAE L K+ I + V++ +KP+D K++ D A +TVED+ GG G V
Sbjct: 515 ALAAAESLKKDKISIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSA 574
Query: 575 FFARE-GIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVRDALKGG 625
E G+ V L V + GK L + GID + I +AV+ + G
Sbjct: 575 AVVGEPGV--TVTRLAV-SQVPRSGKPAELLKMFGIDKDAIVQAVKGLVTKG 623
emb|CAB02889.1| (Z81055) predicted using Genefinder; Similarity to Human
transketolase (SW:TKT_HUMAN); cDNA EST cm01f8 comes from
this gene; cDNA EST EMBL:M75846 comes from this gene;
cDNA EST EMBL:D27403 comes from this gene; cDNA EST
EMBL:...
Length = 618
Score = 107 bits (265), Expect = 3e-22
Identities = 132/522 (25%), Positives = 217/522 (41%), Gaps = 49/522 (9%)
Query: 123 SISAALGFRIGKDLKG---EKEDY-VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILN 178
S+ LG G G +K Y V ++GDG G +EA A + D + I++
Sbjct: 120 SLGQGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIVD 179
Query: 179 DNEMSISPNVGA---ISTYLNR---------IISGHFVQETRQKIKNFLQHFGETPLRIM 226
N + S + TY R I++GH V E + G+ I
Sbjct: 180 VNRLGQSQATSLGHDVETYKARFAAFGFNAIIVNGHNVDELLAAYETARSTKGKPTAIIA 239
Query: 227 KLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALEDTLNNVKDIKGPVLLHVYTKKGK 286
K LKG G+ E+ + H E T+N +K H ++KGK
Sbjct: 240 KT----LKGKGIEGIENED---------NWHGKPVPEGTVNAIK-----ARFHG-SQKGK 280
Query: 287 --GYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWTSVFGKALVELAERDEKIVAITPA 344
KP + P V K+ + E KK + +G AL +L + +++ +
Sbjct: 281 LVAQKPINDAPAIDLHVGSIKMAAPEY-KKGDKVATRAAYGTALAKLGDASPRVIGLDGD 339
Query: 345 MREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLR-PVAAYYSTFLQRAYDQV- 402
+ + + K+ PD+F + IAEQ+ A G P + ++ F RA DQ+
Sbjct: 340 TKNSTFSDKLLKKHPDQFIECFIAEQNLVGVAVGAQCRDRTIPFTSTFAAFFTRATDQIR 399
Query: 403 IHDVALQNLPVTFAIDRAGL-VGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLY 461
+ V+ NL + G+ +G+DGP+ + DL+ R +P V P D
Sbjct: 400 MAAVSFANLKCVGS--HVGVSIGEDGPSQMALEDLAIFRTIPGATVFYPTDAVSAERATE 457
Query: 462 TGIYSGKPFALRYPRGAAYGVPTEGFKKIEIGTWEELLEG--EDCVILAVGYPVYQALRA 519
+ +R R A V + + IG + + + + V++ G +Y++L+A
Sbjct: 458 LAANTKGVVFIRTGR-PALPVLYDNEEPFHIGQAKVVKQSAQDKIVLVGSGVTLYESLKA 516
Query: 520 AEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRY-DTFITVEDNTVVGGFGSGVLEFFAR 578
AE+L KEGI V++ +KP+D K + + A + +T ED+ GG G V A
Sbjct: 517 AEELEKEGIHATVIDPFTIKPLDGKTIAEHALKVGGRVVTTEDHYAAGGIGEAVSAALAD 576
Query: 579 EGIMKRVINLGVPDRFIEHGKQDILRNLVGIDAEGIEKAVRD 620
+ RV +L V + G D L ++ GI A I AV++
Sbjct: 577 YPTI-RVRSLNVKE-VPRSGPPDALVDMYGISARHIVAAVKN 616
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Jan 12, 2000 2:26 PM
Number of letters in database: 136,724,657
Number of sequences in database: 444,417
Lambda K H
0.320 0.142 0.418
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178506178
Number of Sequences: 444417
Number of extensions: 8064545
Number of successful extensions: 17507
Number of sequences better than 10.0: 210
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 16935
Number of HSP's gapped (non-prelim): 305
length of query: 628
length of database: 136,724,657
effective HSP length: 54
effective length of query: 574
effective length of database: 112,726,139
effective search space: 64704803786
effective search space used: 64704803786
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 73 (32.8 bits)
