Score E
Sequences producing significant alignments: (bits) Value
gi|2983419 (AE000712) putative protein [Aquifex aeolicus] 305 1e-82
gi|3378204 (AF079231) annexin p35 [Lycopersicon esculentum] 39 0.015
emb|CAA10261| (AJ130956) annexin P38 [Capsicum annuum] 38 0.033
emb|CAB56466.1| (AJ249706) myosin X [Mus musculus] 33 1.4
sp|Q57506|CYAA_BORBR BIFUNCTIONAL HEMOLYSIN-ADENYLATE CYCLA... 32 1.9
pir||S51672 adenylate cyclase hemolysin - Bordetella bronch... 32 1.9
sp|P37415|YTL2_SALTY HYPOTHETICAL 35.3 KD PROTEIN NEAR TLPA... 32 1.9
gi|1755049 (U55042) myosin X [Bos taurus] 32 2.5
dbj|BAA34519.1| (AB018342) KIAA0799 protein [Homo sapiens] 32 3.2
emb|CAB50544.1| (AJ248288) phosphoribosylaminoimidazole car... 31 4.2
gi|3883072 (AF074611) putative transposase [Yersinia pestis... 31 4.2
gb|AAC67341.1| (AC005499) unknown protein [Arabidopsis thal... 31 4.2
gi|2996355 (AF053947) YhgA homolog [Yersinia pestis] 31 4.2
sp|P15318|CYAA_BORPE BIFUNCTIONAL HEMOLYSIN-ADENYLATE CYCLA... 31 4.2
dbj|BAA80196.1| (AP000061) 79aa long hypothetical protein [... 31 7.2
gb|AAD24540.1|AF113545_1 (AF113545) vacuole-associated anne... 30 9.5
gi|2983419 (AE000712) putative protein [Aquifex aeolicus]
Length = 148
Score = 305 bits (773), Expect = 1e-82
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MGTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQL 60
MGTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQL
Sbjct: 1 MGTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQL 60
Query: 61 PMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRV 120
PMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRV
Sbjct: 61 PMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRV 120
Query: 121 LKRHISYGEIKDVLSELPEDIREMLENA 148
LKRHISYGEIKDVLSELPEDIREMLENA
Sbjct: 121 LKRHISYGEIKDVLSELPEDIREMLENA 148
gi|3378204 (AF079231) annexin p35 [Lycopersicon esculentum]
Length = 315
Score = 39.5 bits (90), Expect = 0.015
Identities = 20/59 (33%), Positives = 34/59 (56%), Gaps = 6/59 (10%)
Query: 19 HEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRV 77
HE++K+L +D+ + +LLRA ++ L+ R + F L + +K + D WD TRV
Sbjct: 214 HEIIKDLEADDDDEYLKLLRAAIECLKPR------EHFEKVLRLAIKKLGTDEWDLTRV 266
emb|CAA10261| (AJ130956) annexin P38 [Capsicum annuum]
Length = 316
Score = 38.3 bits (87), Expect = 0.033
Identities = 20/59 (33%), Positives = 34/59 (56%), Gaps = 5/59 (8%)
Query: 19 HEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRV 77
HE++K+L +D+ + +LLRA ++ L+ + K F L + +K + D WD TRV
Sbjct: 214 HEIIKDLEADDDDEYLKLLRAAIECLK-----TPEKYFEKVLRVAIKGLGTDEWDLTRV 267
emb|CAB56466.1| (AJ249706) myosin X [Mus musculus]
Length = 2030
Score = 32.8 bits (73), Expect = 1.4
Identities = 23/87 (26%), Positives = 41/87 (46%)
Query: 35 RLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMN 94
+ L+ L+ +R++ P +E + +A + LK C + P+R +++ H+Q+ V
Sbjct: 1619 KYLKFHLKRIREQFPGTEMEKYALFIYESLKKTKCREFVPSRDEIEALIHRQEMTSTVYC 1678
Query: 95 HPGLRRPADIESLEDAERVVTAVFRVL 121
H G I S A VV + R L
Sbjct: 1679 HGGGSCKITINSHTTAGEVVEKLIRGL 1705
sp|Q57506|CYAA_BORBR BIFUNCTIONAL HEMOLYSIN-ADENYLATE CYCLASE PRECURSOR (CYCLOLYSIN)
(ACT) (AC-HLY) [CONTAINS: CALMODULIN-SENSITIVE ADENYLATE
CYCLASE (ATP PYROPHOSPHATE-LYASE) (ADENYLYL CYCLASE);
HEMOLYSIN] >gi|1924923|emb|CAA85481| (Z37112) adenylate
cyclase hemolysin [Bordetella bronchiseptica]
Length = 1705
Score = 32.5 bits (72), Expect = 1.9
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 77 VPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDV 133
VP + K D LE V PGLRRP+ + ++E + ++ V R S GE+ D+
Sbjct: 368 VPGRRSKSSPDVLETVPASPGLRRPS-LGAVERQDSGYDSLDGVGSRSFSLGEVSDM 423
pir||S51672 adenylate cyclase hemolysin - Bordetella bronchiseptica
Length = 1705
Score = 32.5 bits (72), Expect = 1.9
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 77 VPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDV 133
VP + K D LE V PGLRRP+ + ++E + ++ V R S GE+ D+
Sbjct: 368 VPGRRSKSSPDVLETVPASPGLRRPS-LGAVERQDSGYDSLDGVGSRSFSLGEVSDM 423
sp|P37415|YTL2_SALTY HYPOTHETICAL 35.3 KD PROTEIN NEAR TLPA OPERON
>gi|541210|pir||S41385 30 K protein similar to E. coli
yadD and yhgA - Salmonella typhimurium
>gi|444033|emb|CAA82634| (Z29513) 30 kDa protein similar
to E. coli yadD and yhgA [Salmonella typhimurium]
Length = 313
Score = 32.5 bits (72), Expect = 1.9
Identities = 21/81 (25%), Positives = 35/81 (42%), Gaps = 19/81 (23%)
Query: 14 GHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAV------ 67
G +H +++ D+H AFRL+R + ++ L A K LP+V+ +
Sbjct: 74 GDGYIHVLVEHQSTPDKHMAFRLIRYAVAAMQRHLEAGHKK-----LPLVIPVLFYTGKR 128
Query: 68 --------WCDGWDPTRVPDK 80
W D +D T + DK
Sbjct: 129 SPYPYSTRWLDEFDDTALADK 149
gi|1755049 (U55042) myosin X [Bos taurus]
Length = 2052
Score = 32.1 bits (71), Expect = 2.5
Identities = 22/87 (25%), Positives = 41/87 (46%)
Query: 35 RLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMN 94
+ L+ L+ +R++ P +E + +A + LK C + P+R +++ H+Q+ V
Sbjct: 1641 KYLKFHLRRIREQFPGTEMEKYALFIYESLKKTKCREFVPSRDEIEALIHRQEMTSTVHC 1700
Query: 95 HPGLRRPADIESLEDAERVVTAVFRVL 121
H G + S A VV + R L
Sbjct: 1701 HGGGSCKITVNSHTTAGEVVEKLIRGL 1727
dbj|BAA34519.1| (AB018342) KIAA0799 protein [Homo sapiens]
Length = 712
Score = 31.7 bits (70), Expect = 3.2
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 35 RLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMN 94
+ L+ L+ +R++ P +E + +A LK C + P+R +++ H+Q+ V
Sbjct: 310 KYLKFHLKRIREQFPGTEMEKYALFTYESLKKTKCREFVPSRDEIEALIHRQEMTSTVYC 369
Query: 95 HPGLRRPADIESLEDAERVVTAVFRVL 121
H G I S A VV + R L
Sbjct: 370 HGGGSCKITINSHTTAGEVVEKLIRGL 396
emb|CAB50544.1| (AJ248288) phosphoribosylaminoimidazole carboxylase (purE)
[Pyrococcus abyssi]
Length = 174
Score = 31.3 bits (69), Expect = 4.2
Identities = 32/129 (24%), Positives = 51/129 (38%), Gaps = 6/129 (4%)
Query: 20 EVMKELGIEDEHKAFRLLRAVLQTLRDR--LPASEGKDFAAQLPMVLKAVWCDGWDPTRV 77
EV E+ + H+ L +T +R G AA LP VL A+ +
Sbjct: 33 EVDYEMKVISAHRTPERLHEYARTAEERGIEVIIAGAGGAAHLPGVLAALTMIPVIGVPI 92
Query: 78 PDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDVLSEL 137
K++ L V PG+ P ++ A+ +L I Y EIK+ L +
Sbjct: 93 KSKALNGLDSLLSIVQMPPGI--PVATVGIDGAKNAALLALEILS--IKYPEIKEKLKKY 148
Query: 138 PEDIREMLE 146
ED++ +E
Sbjct: 149 REDMKRKVE 157
gi|3883072 (AF074611) putative transposase [Yersinia pestis]
>gi|5834755|emb|CAB55253.1| (AL117211) hypothetical
protein YPMT1.71 [Yersinia pestis]
Length = 328
Score = 31.3 bits (69), Expect = 4.2
Identities = 17/59 (28%), Positives = 31/59 (51%), Gaps = 5/59 (8%)
Query: 13 KGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDG 71
+G VH +++ D+H AFRL+R + ++ L A A+LP+V+ ++ G
Sbjct: 88 EGEGYVHVLIEHQSSPDKHMAFRLIRYAIAAMQRHLEAGH-----AKLPLVIPVLFYVG 141
gb|AAC67341.1| (AC005499) unknown protein [Arabidopsis thaliana]
Length = 1444
Score = 31.3 bits (69), Expect = 4.2
Identities = 15/40 (37%), Positives = 24/40 (59%)
Query: 98 LRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDVLSEL 137
LRR + SLED VV + +++ RH + + KD L+E+
Sbjct: 412 LRRRLSVLSLEDLRDVVCSKLKLVSRHDPWADSKDFLTEV 451
gi|2996355 (AF053947) YhgA homolog [Yersinia pestis]
Length = 285
Score = 31.3 bits (69), Expect = 4.2
Identities = 17/59 (28%), Positives = 31/59 (51%), Gaps = 5/59 (8%)
Query: 13 KGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDG 71
+G VH +++ D+H AFRL+R + ++ L A A+LP+V+ ++ G
Sbjct: 45 EGEGYVHVLIEHQSSPDKHMAFRLIRYAIAAMQRHLEAGH-----AKLPLVIPVLFYVG 98
sp|P15318|CYAA_BORPE BIFUNCTIONAL HEMOLYSIN-ADENYLATE CYCLASE PRECURSOR (CYCLOLYSIN)
(ACT) (AC-HLY) [CONTAINS: CALMODULIN-SENSITIVE ADENYLATE
CYCLASE (ATP PYROPHOSPHATE-LYASE) (ADENYLYL CYCLASE);
HEMOLYSIN] >gi|69555|pir||OYBRC cyclolysin - Bordetella
pertussis >gi|396666|emb|CAA68613| (Y00545)
calmodulin-sensitive adenylate cyclase (AA 1-1706)
[Bordetella pertussis]
Length = 1706
Score = 31.3 bits (69), Expect = 4.2
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 77 VPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDV 133
VP K D LE V PGLRRP+ + ++E + ++ V R S GE+ D+
Sbjct: 368 VPSGRSKFSPDVLETVPASPGLRRPS-LGAVERQDSGYDSLDGVGSRSFSLGEVSDM 423
dbj|BAA80196.1| (AP000061) 79aa long hypothetical protein [Aeropyrum pernix]
Length = 79
Score = 30.5 bits (67), Expect = 7.2
Identities = 18/56 (32%), Positives = 28/56 (49%)
Query: 91 RVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDVLSELPEDIREMLE 146
RV G+ +P + L + E V + R + Y E+ D LSELP+ E+L+
Sbjct: 12 RVKYEGGVLKPLEPLVLSEGEEVEVVIRRRVFGEEDYRELVDFLSELPKGKAELLD 67
gb|AAD24540.1|AF113545_1 (AF113545) vacuole-associated annexin VCaB42 [Nicotiana tabacum]
Length = 316
Score = 30.1 bits (66), Expect = 9.5
Identities = 17/58 (29%), Positives = 29/58 (49%), Gaps = 5/58 (8%)
Query: 20 EVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRV 77
E+ K+L + + + +LL A ++ L+ + K F L + +K D WD TRV
Sbjct: 215 EINKDLETDSDDEYLKLLSAAIECLK-----TPEKHFEKVLRLAIKGTGTDEWDLTRV 267
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Jan 12, 2000 2:26 PM
Number of letters in database: 136,724,657
Number of sequences in database: 444,417
Lambda K H
0.321 0.138 0.411
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38113043
Number of Sequences: 444417
Number of extensions: 1376164
Number of successful extensions: 3827
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3819
Number of HSP's gapped (non-prelim): 16
length of query: 148
length of database: 136,724,657
effective HSP length: 51
effective length of query: 97
effective length of database: 114,059,390
effective search space: 11063760830
effective search space used: 11063760830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 66 (30.1 bits)
