Score E
Sequences producing significant alignments: (bits) Value
gi|2983620 (AE000726) putative protein [Aquifex aeolicus] 264 2e-70
gi|2865613 (AF045250) serine proteinase [Anopheles gambiae] 32 1.5
gi|2689954 (AE000785) pyrazinamidase/nicotinamidase (pncA) ... 31 3.3
emb|CAB09638| (Z96801) hypothetical protein MLCL581.15c [My... 31 3.3
emb|CAB41150.1| (AL049658) putative protein [Arabidopsis th... 31 5.7
gb|AAD46471.1|AF108010_1 (AF108010) Hv1LRR2 [Hordeum vulgare] 30 7.5
gi|2981057 (AF051695) sialidase homolog [Trypanosoma cruzi] 30 7.5
sp|Q09822|CC15_SCHPO CELL DIVISION CONTROL PROTEIN 15 >gi|2... 30 7.5
pir||S54119 phosphoprotein - fission yeast (Schizosaccharom... 30 7.5
pir||A57087 cell division control protein cdc15 - fission y... 30 7.5
prf||1809371A Ig, progesterone-binding:SUBUNIT=heavy chain ... 30 7.5
emb|CAA62914| (X91804) immunoglobulin M heavy chain [Homo s... 30 9.8
gi|2983620 (AE000726) putative protein [Aquifex aeolicus]
Length = 125
Score = 264 bits (668), Expect = 2e-70
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MWARVLKLICEELGDRELFLLEADKDLKWFGAPVKEVCEKVNFDARNSEIAQTVKASLQE 60
MWARVLKLICEELGDRELFLLEADKDLKWFGAPVKEVCEKVNFDARNSEIAQTVKASLQE
Sbjct: 1 MWARVLKLICEELGDRELFLLEADKDLKWFGAPVKEVCEKVNFDARNSEIAQTVKASLQE 60
Query: 61 VQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVGFFPSREEAYDSSS 120
VQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVGFFPSREEAYDSSS
Sbjct: 61 VQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVGFFPSREEAYDSSS 120
Query: 121 RFQRE 125
RFQRE
Sbjct: 121 RFQRE 125
gi|2865613 (AF045250) serine proteinase [Anopheles gambiae]
Length = 259
Score = 32.5 bits (72), Expect = 1.5
Identities = 17/55 (30%), Positives = 24/55 (42%)
Query: 53 TVKASLQEVQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVG 107
T L+E +GW V NN A + R R+ Q YD+S R+ +G
Sbjct: 65 TAAHCLEEYTEDGWFEVVAGVNNIAHEEAGAQRRNVTRYEQHESYDLSAIRYDIG 119
gi|2689954 (AE000785) pyrazinamidase/nicotinamidase (pncA) [Borrelia
burgdorferi]
Length = 178
Score = 31.3 bits (69), Expect = 3.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 88 RNRWNQERPYDISETRFRVGFFPSREEAYDSSSRF 122
+N W E P D++ R + FF ++ YDS S F
Sbjct: 52 KNTWGSEFPNDLNTKRIKKVFFKGTDQYYDSYSGF 86
emb|CAB09638| (Z96801) hypothetical protein MLCL581.15c [Mycobacterium leprae]
Length = 320
Score = 31.3 bits (69), Expect = 3.3
Identities = 22/72 (30%), Positives = 32/72 (43%), Gaps = 4/72 (5%)
Query: 5 VLKLICEELGDRELFLLEADKDLKWFGAPVKEVCEKVNFDARNSEIAQTVKASLQEV--- 61
+ +L+CE L + L A++DL G V E A +++A A+L V
Sbjct: 196 LFELLCERLRSNRVVCLMAERDLTRTGVEVDFFGEPTRMPAGPAKLAIKTGAALLPVHCW 255
Query: 62 -QGEGWIVYVDP 72
QG GW V P
Sbjct: 256 FQGSGWGFSVHP 267
emb|CAB41150.1| (AL049658) putative protein [Arabidopsis thaliana]
Length = 1528
Score = 30.5 bits (67), Expect = 5.7
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 32 APVKEVCEKVNFDARNSEIA-QTVKASLQEVQGEGWIVYVDPFNNF---ADIYEANKPRY 87
A E ++ +A+ IA Q K S + VY D NF AD+ E KP
Sbjct: 991 AKTLEYQRRIENEAKEKHIAEQKKKYSCSDPMNVTEAVYDDCIENFFDDADLQEQEKPIN 1050
Query: 88 RNRWNQERPYDISETRFRV-GFFPS 111
+ +WN++ D+ + + G FPS
Sbjct: 1051 QEKWNKQLD-DLEGAKVNINGVFPS 1074
gb|AAD46471.1|AF108010_1 (AF108010) Hv1LRR2 [Hordeum vulgare]
Length = 591
Score = 30.1 bits (66), Expect = 7.5
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 1 MWARVLKLIC---EELGDRELFLLEADKDLKWFGAPVKEVCEKVNFDARNSEIAQTVK 55
+W L+++ E++ D L+L+ D+ W GA +++ C+K N + IA VK
Sbjct: 30 IWFEELRMLAHRIEDIVDEYLYLVGHKHDIGW-GAYLRKGCKKTNLSISLNRIASMVK 86
gi|2981057 (AF051695) sialidase homolog [Trypanosoma cruzi]
Length = 790
Score = 30.1 bits (66), Expect = 7.5
Identities = 28/108 (25%), Positives = 45/108 (40%), Gaps = 10/108 (9%)
Query: 6 LKLICEELGDRE---LFLLEADKDLKW-FGAPVKEVCEKVNFDARNSEIAQTVKASLQEV 61
+ LI L D++ LF L + W F K+ K + D N E ++ ++Q+
Sbjct: 515 IPLIGARLNDKDSTVLFQLSYTSERNWNFTLHKKDFLVKPSGDVGNWETNTAIRVTVQKD 574
Query: 62 QGEGWIVYVDPFNNFADIYEANKPRYRNRWNQER--PYDISETRFRVG 107
+ W VY N IYE ++ N ++ P+ IS F G
Sbjct: 575 NDDEWFVYA----NGRKIYETDEEEMAQDSNADQFGPHRISHFFFGAG 618
sp|Q09822|CC15_SCHPO CELL DIVISION CONTROL PROTEIN 15 >gi|2275095|emb|CAA60115| (X86179)
phosphoprotein [Schizosaccharomyces pombe]
>gi|4726010|emb|CAB08599.2| (Z95334) phosphoprotein.
[Schizosaccharomyces pombe]
Length = 927
Score = 30.1 bits (66), Expect = 7.5
Identities = 22/87 (25%), Positives = 34/87 (38%), Gaps = 11/87 (12%)
Query: 9 ICEELGDRELFLLEADKDLKWFGAPV--------KEVCEKVNFDARNSEIAQTVKASLQE 60
+C+ E + LE K W A + E CEK+ N+ I + + Q
Sbjct: 221 VCDAFQHIEEYRLEFLKTNMWAYANIISTACVKDDESCEKIRLTLENTNIDEDI---TQM 277
Query: 61 VQGEGWIVYVDPFNNFADIYEANKPRY 87
+Q EG + P F D ++ N Y
Sbjct: 278 IQNEGTGTTIPPLPEFNDYFKENGLNY 304
pir||S54119 phosphoprotein - fission yeast (Schizosaccharomyces pombe)
Length = 858
Score = 30.1 bits (66), Expect = 7.5
Identities = 22/87 (25%), Positives = 34/87 (38%), Gaps = 11/87 (12%)
Query: 9 ICEELGDRELFLLEADKDLKWFGAPV--------KEVCEKVNFDARNSEIAQTVKASLQE 60
+C+ E + LE K W A + E CEK+ N+ I + + Q
Sbjct: 201 VCDAFQHIEEYRLEFLKTNMWAYANIISTACVKDDESCEKIRLTLENTNIDEDI---TQM 257
Query: 61 VQGEGWIVYVDPFNNFADIYEANKPRY 87
+Q EG + P F D ++ N Y
Sbjct: 258 IQNEGTGTTIPPLPEFNDYFKENGLNY 284
pir||A57087 cell division control protein cdc15 - fission yeast
(Schizosaccharomyces pombe)
Length = 907
Score = 30.1 bits (66), Expect = 7.5
Identities = 22/87 (25%), Positives = 34/87 (38%), Gaps = 11/87 (12%)
Query: 9 ICEELGDRELFLLEADKDLKWFGAPV--------KEVCEKVNFDARNSEIAQTVKASLQE 60
+C+ E + LE K W A + E CEK+ N+ I + + Q
Sbjct: 201 VCDAFQHIEEYRLEFLKTNMWAYANIISTACVKDDESCEKIRLTLENTNIDEDI---TQM 257
Query: 61 VQGEGWIVYVDPFNNFADIYEANKPRY 87
+Q EG + P F D ++ N Y
Sbjct: 258 IQNEGTGTTIPPLPEFNDYFKENGLNY 284
prf||1809371A Ig, progesterone-binding:SUBUNIT=heavy chain [Mus sp.]
Length = 122
Score = 30.1 bits (66), Expect = 7.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 20 LLEADKDLKWFGAPVKEVCEKVNFDARNSEIAQTVKASLQEVQGEGWIVYVDPFNNF 76
LLE+ +L GA VK C+ + N I + + QG WI Y++P+N++
Sbjct: 4 LLESGAELVRPGASVKISCKAFGYTFTNHHINWVKQ---RPGQGLDWIGYINPYNDY 57
emb|CAA62914| (X91804) immunoglobulin M heavy chain [Homo sapiens]
Length = 121
Score = 29.7 bits (65), Expect = 9.8
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 20 LLEADKDLKWFGAPVKEVCEKVNFDARNSEIAQTVKASLQEVQGEGWIVYVDPFNNFA 77
L+++ ++K GA VK C+ + N +IA +A Q ++ GWI + N+A
Sbjct: 4 LVQSGAEVKKPGASVKVSCKASGYTFNNYDIAWMRQAPGQGLEWMGWISVYNDNTNYA 61
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Jan 12, 2000 2:26 PM
Number of letters in database: 136,724,657
Number of sequences in database: 444,417
Lambda K H
0.320 0.137 0.422
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34915782
Number of Sequences: 444417
Number of extensions: 1349743
Number of successful extensions: 3221
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3217
Number of HSP's gapped (non-prelim): 12
length of query: 125
length of database: 136,724,657
effective HSP length: 49
effective length of query: 76
effective length of database: 114,948,224
effective search space: 8736065024
effective search space used: 8736065024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 65 (29.7 bits)
