Detailed annotation info for ACL00003252;
Annotation NameTranscription elongation factor B polypeptide 1 related cluster
% Sequence Identity61% (57/93)
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q15369Transcription elongation factor B polypeptide 1 related cluster2853e-2561% (57/93)2GO:0003711|transcriptional elongation regulator activity|NR; GO:0005515|protein binding|TAS; GO:0005634|nucleus|IEA; GO:0006355|regulation of transcription, DNA-dependent|IEA; GO:0006357|regulation of transcription from Pol II promoter|TAS; GO:0006512|ubiquitin cycle|IEA
nr1LM8Chain C, Structure Of A Hif-1a-Pvhl-Elonginb-Elonginc Complex pdb|1LQB|B Chain B, Crystal Structure Of A Hydroxylated Hif-1 Alpha Peptide Bound To The PvhlELONGIN-CELONGIN-B Complex2857e-2561% (57/93)2
cogSPBC1861.071504e-1037% (36/97)0
keggrno:64525Tceb1; elongation factor SIII p15 subunit2853e-2561% (57/93)Tceb11
smart00512smart00512, Skp1, Found in Skp1 protein family; Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues2161e-1933% (35/104)Skp11
pfamPF03931pfam03931, Skp1_POZ, Skp1 family, tetramerisation domain1786e-1439% (24/61)Skp1_POZ1
est_othersBM283456ki54d06.y1 Ascaris suum male gut SL1 TOPO v1 Murphy Chiapelli McCarter Ascaris suum cDNA 5' similar to TR:Q9V8V2 Q9V8V2 ELONGIN-C PROTEIN. ;.912e-0740% (24/59)1