Detailed annotation info for ACL00001419;
Annotation NamePutative transformer serine/arginine-rich ribonucleoprotein related cluster
Score269&emsp
E-value6e-23
% Sequence Identity52% (54/103)
Locus
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q84QA6Putative transformer serine/arginine-rich ribonucleoprotein related cluster2696e-2352% (54/103)2GO:0003723|RNA binding|IEA; GO:0019013|viral nucleocapsid|IEA; GO:0030529|ribonucleoprotein complex|IEA
nrXP_482149putative transformer-SR ribonucleoprotein [Oryza sativa (japonica cultivar-group)] dbj|BAD05420.1| putative transformer-SR ribonucleoprotein [Oryza sativa (japonica cultivar-group)] dbj|BAD05836.1| putative transformer-SR ribonucleoprotein [Oryza sativa (japonica cultivar-group)]2807e-2456% (54/95)1
cogSPAC25G10.01[R] COG0724 RNA-binding proteins (RRM domain)1812e-1340% (37/92)1 General function prediction only
keggath:At1g07350F22G5.31; transformer serine/arginine-rich ribonucleoprotein, putative2517e-2151% (49/95)1
smart00360smart00360, RRM, RNA recognition motif;1848e-1644% (33/74)RRM1
smart200157smart00157, PRP, Major prion protein; The prion protein is a major component of scrapie-associated fibrils in Creutzfeldt-Jakob disease, kuru, Gerstmann-Straussler syndrome and bovine spongiform encephalopathy915e-0538% (21/54)PRP2
pfamPF00076pfam00076, RRM_1, RNA recognition motif1564e-1142% (30/71)RRM_11
pfam2PF07172pfam07172, GRP, Glycine rich protein family1457e-1043% (27/62)GRP2
est_othersBU025509QHF9M03.yg.ab1 QH_EFGHJ sunflower RHA280 Helianthus annuus cDNA clone QHF9M03.5156e-6195% (105/110)1