Detailed annotation info for ACL00001018;
Annotation NamePutative pre-mRNA splicing factor related cluster
Score172&emsp
E-value9e-12
% Sequence Identity27% (60/219)
Locus
EC Number
COG Function
KEGG Pathway
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q8W3F7Putative pre-mRNA splicing factor related cluster1729e-1227% (60/219)3GO:0005488|binding|IEA; GO:0005622|intracellular|IEA; GO:0006396|RNA processing|IEA
nrNP_922169putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] gb|AAL58273.1| putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] gb|AAP54456.1| putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)]1722e-1127% (60/219)4
cogSPBC6B1.07[R] COG0457 FOG: TPR repeat1491e-0922% (54/235)1 General function prediction only
keggdme:CG6841-PACG6841; CG6841 gene product1728e-1225% (64/249)CG68411
smart00386smart00386, HAT, HAT (Half-A-TPR) repeats; Present in several RNA-binding proteins1022e-0650% (16/32)HAT1
pfamPF04484pfam04484, DUF566, Family of unknown function (DUF566)1232e-0721% (42/191)DUF5661
pfam2PF05109pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)1161e-0620% (45/218)Herpes_BLLF12
est_othersCK273448EST719526 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADB34 5' end.2422e-2343% (66/153)1