Detailed annotation info for ACL00000330;
Annotation Name40S ribosomal protein, contains C-terminal domain related cluster
Score777&emsp
E-value1e-81
% Sequence Identity69% (155/222)
Locus
EC Number
COG Function Translation, ribosomal structure and biogenesis
KEGG Pathway Ribosome
SourceAccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
SSUNo hits found0
LSUNo hits found0
uniref90UniRef90_Q9SIP740S ribosomal protein, contains C-terminal domain related cluster7771e-8169% (155/222)1GO:0003676|nucleic acid binding|IEA; GO:0003735|structural constituent of ribosome|IEA; GO:0005622|intracellular|IEA; GO:0005840|ribosome|IEA; GO:0006412|protein biosynthesis|IEA; GO:0015935|small ribosomal subunit|IEA
nrXP_463024putative ribosomal protein [Oryza sativa (japonica cultivar-group)] gb|AAR10854.1| putative ribosomal protein [Oryza sativa (japonica cultivar-group)]7792e-8172% (156/216)1
cogSPBC16G5.14c[J] COG0092 Ribosomal protein S36886e-7263% (152/239)1 Translation, ribosomal structure and biogenesis
keggath:At5g35530MOK9.14; 40S ribosomal protein S3 (RPS3C) [KO:K02985]7771e-8170% (156/222)1 Ribosome
smartNo hits found0
pfamPF00189pfam00189, Ribosomal_S3_C, Ribosomal protein S3, C-terminal domain2022e-1631% (27/86)Ribosomal_S3_C1
pfam2PF03251pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd protein1261e-0723% (67/289)Tymo_45kd_70kd2
pfam3PF05956pfam05956, APC_basic, APC basic domain1216e-0723% (66/278)APC_basic3
pfam4PF03154pfam03154, Atrophin-1, Atrophin-1 family1126e-0619% (57/286)Atrophin-14
est_othersBF256471HVSMEf0010B04f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0010B04f.4302e-5148% (95/194)1